RNA–Protein interactions for RNA: YJL192C

SOP4, Transcript of ER-membrane protein, yeastyeast

Gene SOP4, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOP4YJL192C PTC5Q12511 572 aa4.79□□□□□ -1.64
SOP4YJL192C MMS1Q06211 1407 aa4.79□□□□□ -1.64
SOP4YJL192C YSC84P32793 468 aa4.78□□□□□ -1.64
SOP4YJL192C UBP5P39944 805 aa4.78□□□□□ -1.64
SOP4YJL192C VPS53P47061 822 aa4.78□□□□□ -1.64
SOP4YJL192C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
SOP4YJL192C MRL1Q06815 381 aa4.78□□□□□ -1.64
SOP4YJL192C RPO21P04050 1733 aaKnown RBP4.77□□□□□ -1.65
SOP4YJL192C YOR093CQ12275 1648 aa4.77□□□□□ -1.65
SOP4YJL192C MDL2P33311 773 aa4.77□□□□□ -1.65
SOP4YJL192C MGE1P38523 228 aa4.77□□□□□ -1.65
SOP4YJL192C SNF7P39929 240 aaKnown RBP4.77□□□□□ -1.65
SOP4YJL192C DNF2Q12675 1612 aa4.76□□□□□ -1.65
SOP4YJL192C CDC25P04821 1589 aa4.76□□□□□ -1.65
SOP4YJL192C AIM3P38266 947 aaKnown RBP4.76□□□□□ -1.65
SOP4YJL192C YFL054CP43549 646 aa4.76□□□□□ -1.65
SOP4YJL192C YJR107WP47145 328 aa4.76□□□□□ -1.65
SOP4YJL192C GNP1P48813 663 aa4.76□□□□□ -1.65
SOP4YJL192C MRPL22P53881 309 aa4.76□□□□□ -1.65
SOP4YJL192C IOC4Q04213 475 aa4.76□□□□□ -1.65
SOP4YJL192C NTE1Q04958 1679 aa4.76□□□□□ -1.65
SOP4YJL192C RPP0P05317 312 aaKnown RBP4.75□□□□□ -1.65
SOP4YJL192C GCR1P07261 785 aa4.75□□□□□ -1.65
SOP4YJL192C MKK2P32491 506 aa4.75□□□□□ -1.65
SOP4YJL192C HXT13P39924 564 aa4.75□□□□□ -1.65
SOP4YJL192C HXT17P53631 564 aa4.75□□□□□ -1.65
SOP4YJL192C SIW14P53965 281 aa4.75□□□□□ -1.65
SOP4YJL192C HXT15P54854 567 aa4.75□□□□□ -1.65
SOP4YJL192C RSC58Q07979 502 aa4.75□□□□□ -1.65
SOP4YJL192C SPO21Q12411 609 aa4.75□□□□□ -1.65
SOP4YJL192C COQ4O13525 335 aa4.74□□□□□ -1.65
SOP4YJL192C SRO9P25567 434 aaKnown RBP4.74□□□□□ -1.65
SOP4YJL192C SEC8P32855 1065 aa4.74□□□□□ -1.65
SOP4YJL192C MLP1Q02455 1875 aaKnown RBP4.74□□□□□ -1.65
SOP4YJL192C PEP7P32609 515 aa4.73□□□□□ -1.65
SOP4YJL192C MNN4P36044 1178 aa4.73□□□□□ -1.65
SOP4YJL192C FOL2P51601 243 aaKnown RBP4.73□□□□□ -1.65
SOP4YJL192C EAF7P53911 425 aaKnown RBP4.73□□□□□ -1.65
SOP4YJL192C SPS1P08458 490 aa4.72□□□□□ -1.65
SOP4YJL192C TAF13P11747 167 aa4.72□□□□□ -1.65
SOP4YJL192C THI80P35202 319 aa4.72□□□□□ -1.65
SOP4YJL192C URN1Q06525 465 aaKnown RBP4.72□□□□□ -1.65
SOP4YJL192C NBA1Q08229 501 aaKnown RBP4.72□□□□□ -1.65
SOP4YJL192C EDE1P34216 1381 aa4.72□□□□□ -1.65
SOP4YJL192C CHC1P22137 1653 aaKnown RBP4.72□□□□□ -1.65
SOP4YJL192C SPO14P36126 1683 aa4.72□□□□□ -1.65
SOP4YJL192C DOP1Q03921 1698 aa4.71□□□□□ -1.66
SOP4YJL192C QCR6P00127 147 aa4.71□□□□□ -1.66
SOP4YJL192C SNF5P18480 905 aa4.71□□□□□ -1.66
SOP4YJL192C ROX1P25042 368 aa4.71□□□□□ -1.66
SOP4YJL192C SYP1P25623 870 aaKnown RBP4.71□□□□□ -1.66
SOP4YJL192C CCZ1P38273 704 aa4.71□□□□□ -1.66
SOP4YJL192C TAF1P46677 1066 aa4.71□□□□□ -1.66
SOP4YJL192C YRB30P53107 440 aaPredicted RBP4.71□□□□□ -1.66
SOP4YJL192C TNA1P53322 534 aa4.71□□□□□ -1.66
SOP4YJL192C HOS3Q02959 697 aaKnown RBP4.71□□□□□ -1.66
SOP4YJL192C NUP157P40064 1391 aaKnown RBP4.7□□□□□ -1.66
SOP4YJL192C YER152CP10356 443 aa4.7□□□□□ -1.66
SOP4YJL192C PRP6P19735 899 aaPredicted RBP4.7□□□□□ -1.66
SOP4YJL192C MLS1P30952 554 aa4.7□□□□□ -1.66
SOP4YJL192C YKL222CP35995 705 aa4.7□□□□□ -1.66
SOP4YJL192C OYE2Q03558 400 aaKnown RBP4.7□□□□□ -1.66
SOP4YJL192C ESF1Q06344 628 aaKnown RBP4.7□□□□□ -1.66
SOP4YJL192C CDC45Q08032 650 aa4.7□□□□□ -1.66
SOP4YJL192C ESC8Q08119 714 aa4.7□□□□□ -1.66
SOP4YJL192C SNF2P22082 1703 aa4.69□□□□□ -1.66
SOP4YJL192C ABZ1P37254 787 aaPredicted RBP4.69□□□□□ -1.66
SOP4YJL192C BAP2P38084 609 aa4.69□□□□□ -1.66
SOP4YJL192C VPS27P40343 622 aaKnown RBP4.69□□□□□ -1.66
SOP4YJL192C SNO2P53823 222 aa4.69□□□□□ -1.66
SOP4YJL192C RSB1Q08417 382 aa4.69□□□□□ -1.66
SOP4YJL192C YPL260WQ08977 551 aa4.69□□□□□ -1.66
SOP4YJL192C HAP1P0CE41 1502 aa4.68□□□□□ -1.66
SOP4YJL192C RPS13P05756 151 aaKnown RBP4.68□□□□□ -1.66
SOP4YJL192C DBP5P20449 482 aaKnown RBP4.68□□□□□ -1.66
SOP4YJL192C HEM3P28789 327 aa4.68□□□□□ -1.66
SOP4YJL192C TOD6P34219 525 aa4.68□□□□□ -1.66
SOP4YJL192C MCM7P38132 845 aa4.68□□□□□ -1.66
SOP4YJL192C YFR016CP43597 1233 aaKnown RBP4.68□□□□□ -1.66
SOP4YJL192C CNN1P43618 361 aa4.68□□□□□ -1.66
SOP4YJL192C NOP7P53261 605 aaKnown RBP4.68□□□□□ -1.66
SOP4YJL192C YPL277CQ08989 487 aa4.68□□□□□ -1.66
SOP4YJL192C RPA190P10964 1664 aaKnown RBP4.67□□□□□ -1.66
SOP4YJL192C RER2P35196 286 aa4.67□□□□□ -1.66
SOP4YJL192C FLR1P38124 548 aa4.67□□□□□ -1.66
SOP4YJL192C RGD1P38339 666 aa4.67□□□□□ -1.66
SOP4YJL192C PIK1P39104 1066 aa4.67□□□□□ -1.66
SOP4YJL192C RPN3P40016 523 aaKnown RBP4.67□□□□□ -1.66
SOP4YJL192C RIM8P53179 542 aa4.67□□□□□ -1.66
SOP4YJL192C ENV11P53246 860 aa4.67□□□□□ -1.66
SOP4YJL192C TIF35Q04067 274 aaKnown RBP4.67□□□□□ -1.66
SOP4YJL192C TRM3Q07527 1436 aa4.66□□□□□ -1.66
SOP4YJL192C CYC1P00044 109 aaPredicted RBP4.66□□□□□ -1.66
SOP4YJL192C PUF4P25339 888 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
SOP4YJL192C YCR015CP25616 317 aa4.66□□□□□ -1.66
SOP4YJL192C MPH1P40562 993 aa4.66□□□□□ -1.66
SOP4YJL192C ENT3P47160 408 aa4.66□□□□□ -1.66
SOP4YJL192C PDS5Q04264 1277 aa4.66□□□□□ -1.66
SOP4YJL192C RIB2Q12362 591 aaKnown RBP4.66□□□□□ -1.66
SOP4YJL192C LTE1P07866 1435 aa4.65□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 141.9 ms