RNA–Protein interactions for RNA: YJL080C

SCP160, Transcript of Essential RNA-binding G protein effector of mating response pathway, yeast

Gene SCP160, Length 3,669 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCP160	YJL080C	BUL2	Q03758	920 aa	Known RBP	2.74	□□□□□ -1.97
SCP160	YJL080C	MYO5	Q04439	1219 aa	Known RBP	2.74	□□□□□ -1.97
SCP160	YJL080C	ISA1	Q07821	250 aa	Predicted RBP	2.74	□□□□□ -1.97
SCP160	YJL080C	POX1	P13711	748 aa		2.74	□□□□□ -1.97
SCP160	YJL080C	YUR1	P26725	428 aa		2.74	□□□□□ -1.97
SCP160	YJL080C	RPL8B	P29453	256 aa	Known RBP	2.74	□□□□□ -1.97
SCP160	YJL080C	MCM4	P30665	933 aa	Known RBP	2.74	□□□□□ -1.97
SCP160	YJL080C	GPT2	P36148	743 aa		2.74	□□□□□ -1.97
SCP160	YJL080C	MSC7	P38694	644 aa		2.74	□□□□□ -1.97
SCP160	YJL080C	NOC2	P39744	710 aa	Known RBP	2.74	□□□□□ -1.97
SCP160	YJL080C	RPL34A	P87262	121 aa	Predicted RBP	2.74	□□□□□ -1.97
SCP160	YJL080C	RPT6	Q01939	405 aa	Known RBP	2.74	□□□□□ -1.97
SCP160	YJL080C	DUS3	Q06053	668 aa	Known RBP	2.74	□□□□□ -1.97
SCP160	YJL080C	TY1B-A	O13527	1196 aa	Known RBP	2.74	□□□□□ -1.97
SCP160	YJL080C	SRP54	P20424	541 aa	Known RBP	2.74	□□□□□ -1.97
SCP160	YJL080C	MAK31	P23059	88 aa		2.74	□□□□□ -1.97
SCP160	YJL080C	TFC4	P33339	1025 aa		2.74	□□□□□ -1.97
SCP160	YJL080C	ALG2	P43636	503 aa		2.74	□□□□□ -1.97
SCP160	YJL080C	LSB1	P53281	241 aa		2.74	□□□□□ -1.97
SCP160	YJL080C	DFG5	Q05031	458 aa		2.74	□□□□□ -1.97
SCP160	YJL080C	MSC6	Q08818	692 aa	Known RBP	2.74	□□□□□ -1.97
SCP160	YJL080C	SNA3	P14359	133 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	TKL1	P23254	680 aa	Known RBP	2.73	□□□□□ -1.97
SCP160	YJL080C	MKS1	P34072	584 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	RER2	P35196	286 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	DBP7	P36120	742 aa	Known RBP	2.73	□□□□□ -1.97
SCP160	YJL080C	GRS1	P38088	690 aa	Known RBP	2.73	□□□□□ -1.97
SCP160	YJL080C	PMC1	P38929	1173 aa	Predicted RBP	2.73	□□□□□ -1.97
SCP160	YJL080C	XDJ1	P39102	459 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	SYH1	Q02875	849 aa	Known RBP	2.73	□□□□□ -1.97
SCP160	YJL080C	SLD5	Q03406	294 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	YMR321C	Q04898	105 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	UTP4	Q06679	776 aa	Known RBP	2.73	□□□□□ -1.97
SCP160	YJL080C	TRM11	Q12463	433 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	PPG1	P32838	368 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	SHP1	P34223	423 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	SKP2	P42843	763 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	RIM21	P48565	533 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	PTA1	Q01329	785 aa	Predicted RBP	2.73	□□□□□ -1.97
SCP160	YJL080C	VIP1	Q06685	1146 aa	Known RBP	2.73	□□□□□ -1.97
SCP160	YJL080C	VAS1	P07806	1104 aa	Known RBP	2.73	□□□□□ -1.97
SCP160	YJL080C	ACE2	P21192	770 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	ASF1	P32447	279 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	CSM2	P40465	213 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	LIF1	P53150	421 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	DAK1	P54838	584 aa	Known RBP	2.73	□□□□□ -1.97
SCP160	YJL080C	MDM1	Q01846	1127 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	FPR4	Q06205	392 aa	Predicted RBP	2.73	□□□□□ -1.97
SCP160	YJL080C	TFC6	Q06339	672 aa		2.73	□□□□□ -1.97
SCP160	YJL080C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
SCP160	YJL080C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
SCP160	YJL080C	RNR3	P21672	869 aa	Known RBP	2.72	□□□□□ -1.97
SCP160	YJL080C	AMS1	P22855	1083 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	UGA4	P32837	571 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	TPM2	P40414	161 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	RNH70	P53331	553 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	RTP1	Q12751	981 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	YLR422W	Q06409	1932 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	PEP3	P27801	918 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	TGL4	P36165	910 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	REG2	P38232	338 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	FMS1	P50264	508 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	YGL039W	P53183	348 aa	Known RBP	2.72	□□□□□ -1.97
SCP160	YJL080C	HDA1	P53973	706 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	OYE2	Q03558	400 aa	Known RBP	2.72	□□□□□ -1.97
SCP160	YJL080C	EST2	Q06163	884 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	ESF1	Q06344	628 aa	Known RBP	2.72	□□□□□ -1.97
SCP160	YJL080C	AHC1	Q12433	566 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	MOD5	P07884	428 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	SUE1	Q06524	206 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	DSE3	Q08729	430 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	YDR524C-B	Q3E6R4	66 aa		2.72	□□□□□ -1.97
SCP160	YJL080C	VAC17	P25591	423 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	SPO22	P40511	975 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	FOL2	P51601	243 aa	Known RBP	2.71	□□□□□ -1.98
SCP160	YJL080C	SCS3	P53012	380 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	NOB1	Q08444	459 aa	Known RBP	2.71	□□□□□ -1.98
SCP160	YJL080C	RDS2	P19541	446 aa	Known RBP	2.71	□□□□□ -1.98
SCP160	YJL080C	AFT1	P22149	690 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	PUP1	P25043	261 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
SCP160	YJL080C	KTR2	P33550	425 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	POA1	P38218	177 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	NDT80	P38830	627 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	NHA1	Q99271	985 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	RPL8A	P17076	256 aa	Known RBP	2.71	□□□□□ -1.98
SCP160	YJL080C	DUR3	P33413	735 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	MNN4	P36044	1178 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	CIC1	P38779	376 aa	Known RBP	2.71	□□□□□ -1.98
SCP160	YJL080C	PAN5	P38787	379 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	HMF1	P40037	129 aa	Known RBP	2.71	□□□□□ -1.98
SCP160	YJL080C	RSC8	P43609	557 aa	Known RBP	2.71	□□□□□ -1.98
SCP160	YJL080C	GCR2	Q01722	534 aa		2.71	□□□□□ -1.98
SCP160	YJL080C	MAS2	P11914	482 aa		2.7	□□□□□ -1.98
SCP160	YJL080C	TOM20	P35180	183 aa		2.7	□□□□□ -1.98
SCP160	YJL080C	FLR1	P38124	548 aa		2.7	□□□□□ -1.98
SCP160	YJL080C	CCT3	P39077	534 aa	Known RBP	2.7	□□□□□ -1.98
SCP160	YJL080C	HST3	P53687	447 aa		2.7	□□□□□ -1.98
SCP160	YJL080C	MRX10	Q05648	414 aa		2.7	□□□□□ -1.98
SCP160	YJL080C	JIP5	Q06214	492 aa	Predicted RBP	2.7	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms