RNA–Protein interactions for RNA: YIL126W

STH1, Transcript of ATPase component of the RSC chromatin remodeling complex, yeast

Gene STH1, Length 4,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STH1	YIL126W	YLF2	P38746	405 aa		2.4	□□□□□ -2.03
STH1	YIL126W	VPS45	P38932	577 aa		2.4	□□□□□ -2.03
STH1	YIL126W	AIM9	P40053	627 aa	Known RBP	2.4	□□□□□ -2.03
STH1	YIL126W	RLP7	P40693	322 aa	Known RBP	2.4	□□□□□ -2.03
STH1	YIL126W	YNL247W	P53852	767 aa	Known RBP	2.4	□□□□□ -2.03
STH1	YIL126W	YNL134C	P53912	376 aa	Known RBP	2.4	□□□□□ -2.03
STH1	YIL126W	YML119W	Q03208	357 aa		2.4	□□□□□ -2.03
STH1	YIL126W	HOT1	Q03213	719 aa		2.4	□□□□□ -2.03
STH1	YIL126W	GIR2	Q03768	265 aa	Predicted RBP	2.4	□□□□□ -2.03
STH1	YIL126W	AIR2	Q12476	344 aa	Known RBP	2.4	□□□□□ -2.03
STH1	YIL126W	CHO2	P05374	869 aa	Known RBP	2.4	□□□□□ -2.03
STH1	YIL126W	IMG2	P25642	146 aa	Predicted RBP	2.4	□□□□□ -2.03
STH1	YIL126W	RPL5	P26321	297 aa	Known RBP	2.4	□□□□□ -2.03
STH1	YIL126W	MDL2	P33311	773 aa		2.4	□□□□□ -2.03
STH1	YIL126W	SEC66	P33754	206 aa		2.4	□□□□□ -2.03
STH1	YIL126W	ATG19	P35193	415 aa		2.4	□□□□□ -2.03
STH1	YIL126W	OLA1	P38219	394 aa	Known RBP	2.4	□□□□□ -2.03
STH1	YIL126W	SAK1	P38990	1142 aa		2.4	□□□□□ -2.03
STH1	YIL126W	CIN4	P39110	191 aa		2.4	□□□□□ -2.03
STH1	YIL126W	VPS27	P40343	622 aa	Known RBP	2.4	□□□□□ -2.03
STH1	YIL126W	LYS4	P49367	693 aa	Predicted RBP	2.4	□□□□□ -2.03
STH1	YIL126W	BET4	Q00618	327 aa		2.4	□□□□□ -2.03
STH1	YIL126W	NOG1	Q02892	647 aa	Known RBP	2.4	□□□□□ -2.03
STH1	YIL126W	TRS130	Q03660	1102 aa		2.4	□□□□□ -2.03
STH1	YIL126W	PRP42	Q03776	544 aa	Known RBP	2.4	□□□□□ -2.03
STH1	YIL126W	ARO80	Q04052	950 aa		2.4	□□□□□ -2.03
STH1	YIL126W	PDS5	Q04264	1277 aa		2.4	□□□□□ -2.03
STH1	YIL126W	YMR084W	A2P2R3	262 aa		2.39	□□□□□ -2.03
STH1	YIL126W	HAP4	P14064	554 aa		2.39	□□□□□ -2.03
STH1	YIL126W	THR4	P16120	514 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	HPR1	P17629	752 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.39	□□□□□ -2.03	not detected
STH1	YIL126W	MET4	P32389	672 aa		2.39	□□□□□ -2.03
STH1	YIL126W	VPH1	P32563	840 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	ARC19	P33204	171 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	NOC2	P39744	710 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	YJL171C	P46992	396 aa		2.39	□□□□□ -2.03
STH1	YIL126W	RPL34A	P87262	121 aa	Predicted RBP	2.39	□□□□□ -2.03
STH1	YIL126W	TBF1	Q02457	562 aa		2.39	□□□□□ -2.03
STH1	YIL126W	ENT2	Q05785	613 aa		2.39	□□□□□ -2.03
STH1	YIL126W	APC5	Q08683	685 aa		2.39	□□□□□ -2.03
STH1	YIL126W	YPL225W	Q08971	146 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	PDR18	P53756	1333 aa		2.39	□□□□□ -2.03
STH1	YIL126W	PDR1	P12383	1068 aa		2.39	□□□□□ -2.03
STH1	YIL126W	SEC2	P17065	759 aa		2.39	□□□□□ -2.03
STH1	YIL126W	PET123	P17558	318 aa		2.39	□□□□□ -2.03
STH1	YIL126W	YJU2	P28320	278 aa	Predicted RBP	2.39	□□□□□ -2.03
STH1	YIL126W	PMI40	P29952	429 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	MIA40	P36046	403 aa		2.39	□□□□□ -2.03
STH1	YIL126W	RFC1	P38630	861 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	STN1	P38960	494 aa		2.39	□□□□□ -2.03
STH1	YIL126W	SMC2	P38989	1170 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	PSP2	P50109	593 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	YPL034W	Q03083	165 aa		2.39	□□□□□ -2.03
STH1	YIL126W	TFB3	Q03290	321 aa		2.39	□□□□□ -2.03
STH1	YIL126W	MGR3	Q04472	501 aa		2.39	□□□□□ -2.03
STH1	YIL126W	TFB4	Q12004	338 aa		2.39	□□□□□ -2.03
STH1	YIL126W	PDR5	P33302	1511 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	HCA4	P20448	770 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	MIH1	P23748	554 aa		2.39	□□□□□ -2.03
STH1	YIL126W	PCA1	P38360	1216 aa		2.39	□□□□□ -2.03
STH1	YIL126W	RPT2	P40327	437 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	FYV10	P40492	516 aa		2.39	□□□□□ -2.03
STH1	YIL126W	PUS4	P48567	403 aa	Known RBP	2.39	□□□□□ -2.03
STH1	YIL126W	YGR125W	P53273	1036 aa		2.39	□□□□□ -2.03
STH1	YIL126W	MRS2	Q01926	470 aa		2.39	□□□□□ -2.03
STH1	YIL126W	MSH6	Q03834	1242 aa		2.39	□□□□□ -2.03
STH1	YIL126W	KRE28	Q04431	385 aa		2.39	□□□□□ -2.03
STH1	YIL126W	ADY4	Q05955	493 aa		2.39	□□□□□ -2.03
STH1	YIL126W	YPL260W	Q08977	551 aa		2.39	□□□□□ -2.03
STH1	YIL126W	KRE5	P22023	1365 aa		2.38	□□□□□ -2.03
STH1	YIL126W	SEC23	P15303	768 aa	Known RBP	2.38	□□□□□ -2.03
STH1	YIL126W	CLB3	P24870	427 aa		2.38	□□□□□ -2.03
STH1	YIL126W	KNS1	P32350	737 aa	Predicted RBP	2.38	□□□□□ -2.03
STH1	YIL126W	NPL4	P33755	580 aa		2.38	□□□□□ -2.03
STH1	YIL126W	UBP13	P38187	747 aa		2.38	□□□□□ -2.03
STH1	YIL126W	MSR1	P38714	643 aa		2.38	□□□□□ -2.03
STH1	YIL126W	ILV3	P39522	585 aa	Known RBP	2.38	□□□□□ -2.03
STH1	YIL126W	YJR061W	P40355	935 aa		2.38	□□□□□ -2.03
STH1	YIL126W	ATG32	P40458	529 aa		2.38	□□□□□ -2.03
STH1	YIL126W	TY4A-J	P47023	414 aa		2.38	□□□□□ -2.03
STH1	YIL126W	NNF1	P47149	201 aa		2.38	□□□□□ -2.03
STH1	YIL126W	LSG1	P53145	640 aa	Known RBP	2.38	□□□□□ -2.03
STH1	YIL126W	YDR090C	Q03193	310 aa		2.38	□□□□□ -2.03
STH1	YIL126W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	2.38	□□□□□ -2.03	not detected
STH1	YIL126W	SMC5	Q08204	1093 aa		2.38	□□□□□ -2.03
STH1	YIL126W	PSK2	Q08217	1101 aa		2.38	□□□□□ -2.03
STH1	YIL126W	GAS4	Q08271	471 aa		2.38	□□□□□ -2.03
STH1	YIL126W	PCL8	Q08966	492 aa		2.38	□□□□□ -2.03
STH1	YIL126W	ILS1	P09436	1072 aa	Known RBP	2.38	□□□□□ -2.03
STH1	YIL126W	RAM1	P22007	431 aa		2.38	□□□□□ -2.03
STH1	YIL126W	CMK1	P27466	446 aa	Known RBP	2.38	□□□□□ -2.03
STH1	YIL126W	PEP7	P32609	515 aa		2.38	□□□□□ -2.03
STH1	YIL126W	ATG14	P38270	344 aa		2.38	□□□□□ -2.03
STH1	YIL126W	SPT8	P38915	602 aa		2.38	□□□□□ -2.03
STH1	YIL126W	HAL5	P38970	855 aa	Known RBP	2.38	□□□□□ -2.03
STH1	YIL126W	RGA1	P39083	1007 aa		2.38	□□□□□ -2.03
STH1	YIL126W	LAM5	P43560	674 aa		2.38	□□□□□ -2.03
STH1	YIL126W	DAS1	P47005	663 aa		2.38	□□□□□ -2.03
STH1	YIL126W	SPO1	P53541	631 aa		2.38	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms