RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C DID4P36108 232 aa14.93□□□□□ -0.02
SHU1YHL006C MUK1Q02866 612 aa14.93□□□□□ -0.02
SHU1YHL006C PSK2Q08217 1101 aa14.93□□□□□ -0.02
SHU1YHL006C ASF1P32447 279 aa14.92□□□□□ -0.02
SHU1YHL006C DRE2P36152 348 aa14.92□□□□□ -0.02
SHU1YHL006C EMI2Q04409 500 aaKnown RBP14.92□□□□□ -0.02
SHU1YHL006C PRP22P24384 1145 aaKnown RBP14.91□□□□□ -0.02
SHU1YHL006C ULP2P40537 1034 aaPredicted RBP14.91□□□□□ -0.02
SHU1YHL006C COQ9Q05779 260 aa14.91□□□□□ -0.02
SHU1YHL006C TIP41Q12199 356 aa14.91□□□□□ -0.02
SHU1YHL006C YHR131CP38835 850 aa14.9□□□□□ -0.02
SHU1YHL006C EAF5P39995 279 aa14.89□□□□□ -0.03
SHU1YHL006C PGA2P53903 129 aa14.89□□□□□ -0.03
SHU1YHL006C ROD1Q02805 837 aa14.89□□□□□ -0.03
SHU1YHL006C MAG2Q06436 670 aaKnown RBP14.89□□□□□ -0.03
SHU1YHL006C SMC5Q08204 1093 aa14.89□□□□□ -0.03
SHU1YHL006C SRD1P09007 221 aa14.88□□□□□ -0.03
SHU1YHL006C RPL19AP0CX82 189 aaKnown RBP14.88□□□□□ -0.03
SHU1YHL006C RPL19BP0CX83 189 aaPredicted RBP14.88□□□□□ -0.03
SHU1YHL006C RFC5P38251 354 aa14.88□□□□□ -0.03
SHU1YHL006C YGR153WP48238 217 aa14.88□□□□□ -0.03
SHU1YHL006C SKY1Q03656 742 aa14.88□□□□□ -0.03
SHU1YHL006C YOR296WQ08748 1289 aa14.88□□□□□ -0.03
SHU1YHL006C ELG1Q12050 791 aa14.88□□□□□ -0.03
SHU1YHL006C TUF1P02992 437 aaKnown RBP14.87□□□□□ -0.03
SHU1YHL006C FMP10P40098 244 aa14.87□□□□□ -0.03
SHU1YHL006C SDA1P53313 767 aaKnown RBP14.87□□□□□ -0.03
SHU1YHL006C EIS1Q05050 843 aaKnown RBP14.87□□□□□ -0.03
SHU1YHL006C YLH47Q06493 454 aa14.87□□□□□ -0.03
SHU1YHL006C SMC6Q12749 1114 aa14.87□□□□□ -0.03
SHU1YHL006C OPT1P40897 799 aa14.86□□□□□ -0.03
SHU1YHL006C GCV2P49095 1034 aa14.86□□□□□ -0.03
SHU1YHL006C PTC5Q12511 572 aa14.86□□□□□ -0.03
SHU1YHL006C NBL1Q3E7Y6 73 aa14.86□□□□□ -0.03
SHU1YHL006C CPA2P03965 1118 aaKnown RBP14.85□□□□□ -0.03
SHU1YHL006C SLX1P38324 304 aa14.85□□□□□ -0.03
SHU1YHL006C YPL150WQ12152 901 aa14.85□□□□□ -0.03
SHU1YHL006C HIF1Q12373 385 aa14.85□□□□□ -0.03
SHU1YHL006C ALG1P16661 449 aa14.84□□□□□ -0.03
SHU1YHL006C FYV10P40492 516 aa14.84□□□□□ -0.03
SHU1YHL006C INP52P50942 1183 aa14.84□□□□□ -0.03
SHU1YHL006C FUS2Q05670 677 aa14.84□□□□□ -0.03
SHU1YHL006C RLF2Q12495 606 aa14.84□□□□□ -0.03
SHU1YHL006C SPT2P06843 333 aaPredicted RBP14.83□□□□□ -0.04
SHU1YHL006C MSD1P15179 658 aaKnown RBP14.83□□□□□ -0.04
SHU1YHL006C ROG3P43602 733 aa14.83□□□□□ -0.04
SHU1YHL006C AVT1P47082 602 aa14.83□□□□□ -0.04
SHU1YHL006C PIL1P53252 339 aaKnown RBP14.83□□□□□ -0.04
SHU1YHL006C TPO2P53283 614 aa14.83□□□□□ -0.04
SHU1YHL006C CBK1P53894 756 aa14.83□□□□□ -0.04
SHU1YHL006C VPS20Q04272 221 aa14.83□□□□□ -0.04
SHU1YHL006C ADY4Q05955 493 aa14.83□□□□□ -0.04
SHU1YHL006C NOC3Q07896 663 aaPredicted RBP14.83□□□□□ -0.04
SHU1YHL006C WHI2P12611 486 aa14.82□□□□□ -0.04
SHU1YHL006C URK1P27515 501 aa14.82□□□□□ -0.04
SHU1YHL006C PIH1P38768 344 aa14.82□□□□□ -0.04
SHU1YHL006C RPN3P40016 523 aaKnown RBP14.82□□□□□ -0.04
SHU1YHL006C JJJ3P47138 172 aa14.82□□□□□ -0.04
SHU1YHL006C MET13P53128 600 aa14.82□□□□□ -0.04
SHU1YHL006C PNG1Q02890 363 aa14.82□□□□□ -0.04
SHU1YHL006C HFI1Q12060 488 aa14.82□□□□□ -0.04
SHU1YHL006C YEL076C-AP0CX16 216 aa14.81□□□□□ -0.04
SHU1YHL006C YLR464WP0CX17 216 aa14.81□□□□□ -0.04
SHU1YHL006C ATG19P35193 415 aa14.81□□□□□ -0.04
SHU1YHL006C UBX7P38349 436 aa14.81□□□□□ -0.04
SHU1YHL006C YEL076CP39971 216 aa14.81□□□□□ -0.04
SHU1YHL006C YLR455WQ06188 304 aa14.81□□□□□ -0.04
SHU1YHL006C TCP1P12612 559 aaKnown RBP14.8□□□□□ -0.04
SHU1YHL006C IDI1P15496 288 aa14.8□□□□□ -0.04
SHU1YHL006C FRS2P15625 503 aaKnown RBP14.8□□□□□ -0.04
SHU1YHL006C TMT1P32643 299 aa14.8□□□□□ -0.04
SHU1YHL006C TTI1P36097 1038 aa14.8□□□□□ -0.04
SHU1YHL006C SIP3P38717 1229 aa14.8□□□□□ -0.04
SHU1YHL006C NCS2P53923 493 aaPredicted RBP14.8□□□□□ -0.04
SHU1YHL006C PCD1Q12524 340 aa14.8□□□□□ -0.04
SHU1YHL006C ADE2P21264 571 aaKnown RBP14.79□□□□□ -0.04
SHU1YHL006C ERC1P38767 581 aa14.79□□□□□ -0.04
SHU1YHL006C HEH2Q03281 663 aa14.79□□□□□ -0.04
SHU1YHL006C PRC1P00729 532 aa14.78□□□□□ -0.04
SHU1YHL006C TIF1P10081 395 aaKnown RBP14.78□□□□□ -0.04
SHU1YHL006C PET10P36139 283 aa14.78□□□□□ -0.04
SHU1YHL006C YHL026CP38740 315 aa14.78□□□□□ -0.04
SHU1YHL006C RTC4P53850 401 aa14.78□□□□□ -0.04
SHU1YHL006C YNL134CP53912 376 aaKnown RBP14.78□□□□□ -0.04
SHU1YHL006C YNL034WP53963 612 aa14.78□□□□□ -0.04
SHU1YHL006C ARK1P53974 638 aa14.78□□□□□ -0.04
SHU1YHL006C YNL018CP53976 612 aa14.78□□□□□ -0.04
SHU1YHL006C PGI1P12709 554 aaKnown RBP14.77□□□□□ -0.05
SHU1YHL006C URA1P28272 314 aaPredicted RBP14.77□□□□□ -0.05
SHU1YHL006C MAL33P38157 468 aa14.77□□□□□ -0.05
SHU1YHL006C NPA3P47122 385 aa14.77□□□□□ -0.05
SHU1YHL006C IES4Q08561 116 aa14.77□□□□□ -0.05
SHU1YHL006C BUD2P33314 1104 aa14.76□□□□□ -0.05
SHU1YHL006C PGM2P37012 569 aaKnown RBP14.76□□□□□ -0.05
SHU1YHL006C YAP1801P38856 637 aa14.76□□□□□ -0.05
SHU1YHL006C UBA2P52488 636 aa14.76□□□□□ -0.05
SHU1YHL006C RTT102P53330 157 aa14.76□□□□□ -0.05
SHU1YHL006C DOT1Q04089 582 aaKnown RBP14.76□□□□□ -0.05
SHU1YHL006C MMR1Q06324 491 aa14.76□□□□□ -0.05
SHU1YHL006C ADE4P04046 510 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 5,963 RNA–protein pairs in 630.2 ms