RNA–Protein interactions for RNA: YGR077C

PEX8, Transcript of Intraperoxisomal organizer of the peroxisomal import machinery, yeast

Gene PEX8, Length 1,770 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX8	YGR077C	IML1	P47170	1584 aa		3.02	□□□□□ -1.93
PEX8	YGR077C	BCK1	Q01389	1478 aa		3.02	□□□□□ -1.93
PEX8	YGR077C	AFG2	P32794	780 aa		3.02	□□□□□ -1.93
PEX8	YGR077C	DUT1	P33317	147 aa		3.02	□□□□□ -1.93
PEX8	YGR077C	ADD66	P36040	267 aa		3.02	□□□□□ -1.93
PEX8	YGR077C	PAM1	P37304	830 aa	Known RBP	3.02	□□□□□ -1.93
PEX8	YGR077C	YAR028W	P39548	234 aa		3.02	□□□□□ -1.93
PEX8	YGR077C	RIM8	P53179	542 aa		3.02	□□□□□ -1.93
PEX8	YGR077C	YNR063W	P53749	607 aa		3.02	□□□□□ -1.93
PEX8	YGR077C	ROD1	Q02805	837 aa		3.02	□□□□□ -1.93
PEX8	YGR077C	EST2	Q06163	884 aa		3.02	□□□□□ -1.93
PEX8	YGR077C	AVO1	Q08236	1176 aa		3.02	□□□□□ -1.93
PEX8	YGR077C	DED1	P06634	604 aa	Known RBP	3.01	□□□□□ -1.93
PEX8	YGR077C	UGA2	P38067	497 aa		3.01	□□□□□ -1.93
PEX8	YGR077C	SIW14	P53965	281 aa		3.01	□□□□□ -1.93
PEX8	YGR077C	RAT1	Q02792	1006 aa	Known RBP	3.01	□□□□□ -1.93
PEX8	YGR077C	SSY1	Q03770	852 aa		3.01	□□□□□ -1.93
PEX8	YGR077C	MRL1	Q06815	381 aa		3.01	□□□□□ -1.93
PEX8	YGR077C	TRE1	Q08919	783 aa		3.01	□□□□□ -1.93
PEX8	YGR077C	PDR11	P40550	1411 aa		3.01	□□□□□ -1.93
PEX8	YGR077C	TAF13	P11747	167 aa		3	□□□□□ -1.93
PEX8	YGR077C	SMY2	P32909	740 aa	Known RBP	3	□□□□□ -1.93
PEX8	YGR077C	NMD3	P38861	518 aa	Known RBP	3	□□□□□ -1.93
PEX8	YGR077C	RKM2	Q03942	479 aa		3	□□□□□ -1.93
PEX8	YGR077C	PNS1	Q12412	539 aa		3	□□□□□ -1.93
PEX8	YGR077C	RET1	P22276	1149 aa	Known RBP	3	□□□□□ -1.93
PEX8	YGR077C	MKK2	P32491	506 aa		3	□□□□□ -1.93
PEX8	YGR077C	PET112	P33893	541 aa		3	□□□□□ -1.93
PEX8	YGR077C	SNU71	P53207	620 aa	Known RBP	3	□□□□□ -1.93
PEX8	YGR077C	RSA3	Q05942	220 aa	Known RBP	3	□□□□□ -1.93
PEX8	YGR077C	YLR257W	Q06146	321 aa	Known RBP	3	□□□□□ -1.93
PEX8	YGR077C	RTT10	Q08924	1013 aa		3	□□□□□ -1.93
PEX8	YGR077C	YVC1	Q12324	675 aa		3	□□□□□ -1.93
PEX8	YGR077C	CDC34	P14682	295 aa		2.99	□□□□□ -1.93
PEX8	YGR077C	NNK1	P36003	928 aa		2.99	□□□□□ -1.93
PEX8	YGR077C	PEX7	P39108	375 aa		2.99	□□□□□ -1.93
PEX8	YGR077C	MRPL22	P53881	309 aa		2.99	□□□□□ -1.93
PEX8	YGR077C	EEB1	Q02891	456 aa		2.99	□□□□□ -1.93
PEX8	YGR077C	TUB2	P02557	457 aa	Known RBP	2.98	□□□□□ -1.93
PEX8	YGR077C	TOD6	P34219	525 aa		2.98	□□□□□ -1.93
PEX8	YGR077C	RER2	P35196	286 aa		2.98	□□□□□ -1.93
PEX8	YGR077C	ALG3	P38179	458 aa		2.98	□□□□□ -1.93
PEX8	YGR077C	QNS1	P38795	714 aa	Known RBP	2.98	□□□□□ -1.93
PEX8	YGR077C	JIP5	Q06214	492 aa	Predicted RBP	2.98	□□□□□ -1.93
PEX8	YGR077C	IMH1	Q06704	911 aa	Known RBP	2.98	□□□□□ -1.93
PEX8	YGR077C	PUS7	Q08647	676 aa	Known RBP	2.98	□□□□□ -1.93
PEX8	YGR077C	LAP2	Q10740	671 aa		2.98	□□□□□ -1.93
PEX8	YGR077C	LPX1	Q12405	387 aa	Known RBP	2.98	□□□□□ -1.93
PEX8	YGR077C	GEA1	P47102	1408 aa	Predicted RBP	2.98	□□□□□ -1.93
PEX8	YGR077C	PRO1	P32264	428 aa		2.97	□□□□□ -1.93
PEX8	YGR077C	MNR2	P35724	969 aa		2.97	□□□□□ -1.93
PEX8	YGR077C	ENT3	P47160	408 aa		2.97	□□□□□ -1.93
PEX8	YGR077C	VPS16	Q03308	798 aa		2.97	□□□□□ -1.93
PEX8	YGR077C	TPP1	Q03796	238 aa		2.97	□□□□□ -1.93
PEX8	YGR077C	SVF1	Q05515	481 aa		2.97	□□□□□ -1.93
PEX8	YGR077C	PTC5	Q12511	572 aa		2.97	□□□□□ -1.93
PEX8	YGR077C	KIP1	P28742	1111 aa		2.97	□□□□□ -1.93
PEX8	YGR077C	YJL045W	P47052	634 aa		2.97	□□□□□ -1.93
PEX8	YGR077C	FAA4	P47912	694 aa	Known RBP	2.97	□□□□□ -1.93
PEX8	YGR077C	PIN2	Q12057	282 aa		2.97	□□□□□ -1.93
PEX8	YGR077C	ENT1	Q12518	454 aa		2.97	□□□□□ -1.93
PEX8	YGR077C	SAM35	P14693	329 aa		2.96	□□□□□ -1.94
PEX8	YGR077C	SYP1	P25623	870 aa	Known RBP	2.96	□□□□□ -1.94
PEX8	YGR077C	SHM2	P37291	469 aa	Known RBP	2.96	□□□□□ -1.94
PEX8	YGR077C	HSE1	P38753	452 aa		2.96	□□□□□ -1.94
PEX8	YGR077C	GPB2	P39717	880 aa		2.96	□□□□□ -1.94
PEX8	YGR077C	VPS53	P47061	822 aa		2.96	□□□□□ -1.94
PEX8	YGR077C	YGR053C	P53234	283 aa		2.96	□□□□□ -1.94
PEX8	YGR077C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
PEX8	YGR077C	TIF35	Q04067	274 aa	Known RBP	2.96	□□□□□ -1.94
PEX8	YGR077C	BUD21	Q08492	214 aa	Predicted RBP	2.96	□□□□□ -1.94
PEX8	YGR077C	CFT1	Q06632	1357 aa	Known RBP	2.96	□□□□□ -1.94
PEX8	YGR077C	SRB8	P25648	1427 aa		2.96	□□□□□ -1.94
PEX8	YGR077C	PDR5	P33302	1511 aa	Known RBP	2.95	□□□□□ -1.94
PEX8	YGR077C	YRF1-2	P40105	1681 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	TRP2	P00899	507 aa	Known RBP	2.95	□□□□□ -1.94
PEX8	YGR077C	DBP5	P20449	482 aa	Known RBP	2.95	□□□□□ -1.94
PEX8	YGR077C	MLS1	P30952	554 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	ATG14	P38270	344 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	PTC7	P38797	343 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	MPH1	P40562	993 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	CNN1	P43618	361 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	RCL1	Q08096	367 aa	Predicted RBP	2.95	□□□□□ -1.94
PEX8	YGR077C	HRK1	Q08732	759 aa	Known RBP	2.95	□□□□□ -1.94
PEX8	YGR077C	YDL177C	Q12257	170 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	SOD2	P00447	233 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	RAD27	P26793	382 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	LYP1	P32487	611 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	MOT2	P34909	587 aa	Known RBP	2.95	□□□□□ -1.94
PEX8	YGR077C	MAD1	P40957	749 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	YFL054C	P43549	646 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	GDE1	Q02979	1223 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	YML122C	Q03207	126 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	CLU1	Q03690	1277 aa	Known RBP	2.95	□□□□□ -1.94
PEX8	YGR077C	ESC2	Q06340	456 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	YPL277C	Q08989	487 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	TMA46	Q12000	345 aa	Known RBP	2.95	□□□□□ -1.94
PEX8	YGR077C	YPL066W	Q12194	479 aa		2.95	□□□□□ -1.94
PEX8	YGR077C	YER152C	P10356	443 aa		2.94	□□□□□ -1.94
PEX8	YGR077C	CLN2	P20438	545 aa		2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms