RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMC1	YGL006W	INM2	Q05533	292 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	RMP1	Q12530	201 aa		4.55	□□□□□ -1.68
PMC1	YGL006W	SEM1	O94742	89 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	CIT1	P00890	479 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	RIT1	P23796	513 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	ILV6	P25605	309 aa	Known RBP	4.54	□□□□□ -1.68
PMC1	YGL006W	PRP40	P33203	583 aa	Known RBP	4.54	□□□□□ -1.68
PMC1	YGL006W	RRN3	P36070	627 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	PET10	P36139	283 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	MAL31	P38156	614 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	ERP5	P38819	212 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	RNR4	P49723	345 aa	Known RBP	4.54	□□□□□ -1.68
PMC1	YGL006W	UBA2	P52488	636 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	RTC4	P53850	401 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	COG6	P53959	839 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	GDE1	Q02979	1223 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	YLR177W	Q06251	628 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	ACM1	Q08981	209 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
PMC1	YGL006W	CBP3	P21560	335 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	HEM3	P28789	327 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	RXT2	P38255	430 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	MMM1	P41800	426 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	ZIP2	P53061	704 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	VTC3	Q02725	835 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	DIG1	Q03063	452 aa	Known RBP	4.54	□□□□□ -1.68
PMC1	YGL006W	FAR8	Q05040	523 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	YDR341C	Q05506	607 aa	Known RBP	4.54	□□□□□ -1.68
PMC1	YGL006W	YSH1	Q06224	779 aa	Predicted RBP	4.54	□□□□□ -1.68
PMC1	YGL006W	SPO11	P23179	398 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	SEC20	P28791	383 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	BMH1	P29311	267 aa	Known RBP	4.54	□□□□□ -1.68
PMC1	YGL006W	CDC3	P32457	520 aa	Known RBP	4.54	□□□□□ -1.68
PMC1	YGL006W	CBF2	P32504	956 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	YKL023W	P36103	277 aa	Known RBP	4.54	□□□□□ -1.68
PMC1	YGL006W	PIH1	P38768	344 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	SUM1	P46676	1062 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	AIP1	P46680	615 aa	Known RBP	4.54	□□□□□ -1.68
PMC1	YGL006W	ATG1	P53104	897 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	YGR016W	P53209	190 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	TIM11	P81449	96 aa	Predicted RBP	4.54	□□□□□ -1.68
PMC1	YGL006W	PPM2	Q08282	695 aa		4.54	□□□□□ -1.68
PMC1	YGL006W	DUR1,2	P32528	1835 aa	Known RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	YMR085W	P0CF18	432 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	VMA2	P16140	517 aa	Known RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	IME1	P21190	360 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	RAM2	P29703	316 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	PYC2	P32327	1180 aa	Known RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	MDL2	P33311	773 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	KES1	P35844	434 aa	Known RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	YKL133C	P36066	463 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	ORC6	P38826	435 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	CSM2	P40465	213 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	TMA22	P47089	198 aa	Predicted RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	CEF1	Q03654	590 aa	Predicted RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	MET6	P05694	767 aa	Known RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	SRV2	P17555	526 aa	Known RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	VPS34	P22543	875 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	TOA1	P32773	286 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	UGA2	P38067	497 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	PPS1	P38148	807 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	ERG7	P38604	731 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	SSP1	P38871	571 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	SET5	P38890	526 aa	Known RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	GVP36	P40531	326 aa	Known RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	NMD5	P46970	1048 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	KAP114	P53067	1004 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	RPT6	Q01939	405 aa	Known RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	UTP6	Q02354	440 aa	Known RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	ERV41	Q04651	352 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	ADY4	Q05955	493 aa		4.53	□□□□□ -1.68
PMC1	YGL006W	TSR1	Q07381	788 aa	Known RBP	4.53	□□□□□ -1.68
PMC1	YGL006W	CDC10	P25342	322 aa	Known RBP	4.52	□□□□□ -1.69
PMC1	YGL006W	SNT1	P25357	1226 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	NPL4	P33755	580 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	SPC42	P36094	363 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	CCC2	P38995	1004 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	MPH1	P40562	993 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	MPC54	Q08550	464 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	OSW1	Q08692	278 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	TAF10	Q12030	206 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	RPB2	P08518	1224 aa	Known RBP	4.52	□□□□□ -1.69
PMC1	YGL006W	SPO16	P17122	198 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	VMA4	P22203	233 aa	Known RBP	4.52	□□□□□ -1.69
PMC1	YGL006W	MLS1	P30952	554 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	RRN6	P32786	894 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	TIF5	P38431	405 aa	Known RBP	4.52	□□□□□ -1.69
PMC1	YGL006W	REV7	P38927	245 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	SET2	P46995	733 aa	Known RBP	4.52	□□□□□ -1.69
PMC1	YGL006W	PCL10	P53124	433 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	CUS1	Q02554	436 aa	Predicted RBP	4.52	□□□□□ -1.69
PMC1	YGL006W	YLR271W	Q06152	274 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	FRA1	Q07825	749 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	AIM41	Q12032	185 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	OCA6	Q12454	224 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	RPL22A	P05749	121 aa	Known RBP	4.52	□□□□□ -1.69
PMC1	YGL006W	PIF1	P07271	859 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	NUC1	P08466	329 aa		4.52	□□□□□ -1.69
PMC1	YGL006W	PRP9	P19736	530 aa	Known RBP	4.52	□□□□□ -1.69
PMC1	YGL006W	PHO87	P25360	923 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms