RNA–Protein interactions for RNA: YFR051C

RET2, Transcript of Delta subunit of the coatomer complex (COPI), yeast

Gene RET2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET2	YFR051C	ROG3	P43602	733 aa		11.27	□□□□□ -0.6
RET2	YFR051C	UBA2	P52488	636 aa		11.27	□□□□□ -0.6
RET2	YFR051C	PEX19	Q07418	342 aa		11.27	□□□□□ -0.6
RET2	YFR051C	YDR524C-B	Q3E6R4	66 aa		11.27	□□□□□ -0.6
RET2	YFR051C	HIS4	P00815	799 aa	Known RBP	11.27	□□□□□ -0.61
RET2	YFR051C	AFT1	P22149	690 aa		11.27	□□□□□ -0.61
RET2	YFR051C	MBR1	P23493	339 aa		11.27	□□□□□ -0.61
RET2	YFR051C	SMY2	P32909	740 aa	Known RBP	11.27	□□□□□ -0.61
RET2	YFR051C	DUR3	P33413	735 aa		11.27	□□□□□ -0.61
RET2	YFR051C	VPS24	P36095	224 aa	Known RBP	11.27	□□□□□ -0.61
RET2	YFR051C	FYV10	P40492	516 aa		11.27	□□□□□ -0.61
RET2	YFR051C	SMC5	Q08204	1093 aa		11.27	□□□□□ -0.61
RET2	YFR051C	LSP1	Q12230	341 aa	Known RBP	11.27	□□□□□ -0.61
RET2	YFR051C	HEM1	P09950	548 aa	Predicted RBP	11.26	□□□□□ -0.61
RET2	YFR051C	MCM3	P24279	971 aa	Known RBP	11.26	□□□□□ -0.61
RET2	YFR051C	PRP22	P24384	1145 aa	Known RBP	11.26	□□□□□ -0.61
RET2	YFR051C	WHI3	P34761	661 aa	Known RBP	11.26	□□□□□ -0.61
RET2	YFR051C	PET10	P36139	283 aa		11.26	□□□□□ -0.61
RET2	YFR051C	PIH1	P38768	344 aa		11.26	□□□□□ -0.61
RET2	YFR051C	ULP2	P40537	1034 aa	Predicted RBP	11.26	□□□□□ -0.61
RET2	YFR051C	NCR1	Q12200	1170 aa		11.26	□□□□□ -0.61
RET2	YFR051C	RME1	P32338	300 aa	Known RBP	11.25	□□□□□ -0.61
RET2	YFR051C	SIP3	P38717	1229 aa		11.25	□□□□□ -0.61
RET2	YFR051C	BDH2	P39713	417 aa		11.25	□□□□□ -0.61
RET2	YFR051C	RPN3	P40016	523 aa	Known RBP	11.25	□□□□□ -0.61
RET2	YFR051C	DAK2	P43550	591 aa		11.25	□□□□□ -0.61
RET2	YFR051C	HST1	P53685	503 aa		11.25	□□□□□ -0.61
RET2	YFR051C	COG8	Q04632	607 aa		11.25	□□□□□ -0.61
RET2	YFR051C	FUS2	Q05670	677 aa		11.25	□□□□□ -0.61
RET2	YFR051C	YEL076C-A	P0CX16	216 aa		11.24	□□□□□ -0.61
RET2	YFR051C	YLR464W	P0CX17	216 aa		11.24	□□□□□ -0.61
RET2	YFR051C	CKA2	P19454	339 aa		11.24	□□□□□ -0.61
RET2	YFR051C	UBC1	P21734	215 aa	Known RBP	11.24	□□□□□ -0.61
RET2	YFR051C	YEL076C	P39971	216 aa		11.24	□□□□□ -0.61
RET2	YFR051C	SGM1	P47166	707 aa		11.24	□□□□□ -0.61
RET2	YFR051C	CLA4	P48562	842 aa		11.24	□□□□□ -0.61
RET2	YFR051C	AZR1	P50080	613 aa		11.24	□□□□□ -0.61
RET2	YFR051C	ATG19	P35193	415 aa		11.24	□□□□□ -0.61
RET2	YFR051C	DID4	P36108	232 aa		11.24	□□□□□ -0.61
RET2	YFR051C	EAF5	P39995	279 aa		11.24	□□□□□ -0.61
RET2	YFR051C	CUE3	P53137	624 aa	Known RBP	11.24	□□□□□ -0.61
RET2	YFR051C	DED1	P06634	604 aa	Known RBP	11.23	□□□□□ -0.61
RET2	YFR051C	RAM2	P29703	316 aa		11.23	□□□□□ -0.61
RET2	YFR051C	ALD5	P40047	520 aa	Known RBP	11.23	□□□□□ -0.61
RET2	YFR051C	INP51	P40559	946 aa	Known RBP	11.23	□□□□□ -0.61
RET2	YFR051C	ACF4	P47129	309 aa		11.23	□□□□□ -0.61
RET2	YFR051C	PSR2	Q07949	397 aa		11.23	□□□□□ -0.61
RET2	YFR051C	LDB19	Q12502	818 aa		11.23	□□□□□ -0.61
RET2	YFR051C	TCP1	P12612	559 aa	Known RBP	11.22	□□□□□ -0.61
RET2	YFR051C	PFK1	P16861	987 aa	Known RBP	11.22	□□□□□ -0.61
RET2	YFR051C	POT1	P27796	417 aa	Known RBP RIP-Chip data	11.22	□□□□□ -0.61	not detected
RET2	YFR051C	EFT1	P32324	842 aa	Known RBP	11.22	□□□□□ -0.61
RET2	YFR051C	THI6	P41835	540 aa		11.22	□□□□□ -0.61
RET2	YFR051C	GUP1	P53154	560 aa		11.22	□□□□□ -0.61
RET2	YFR051C	NCS2	P53923	493 aa	Predicted RBP	11.22	□□□□□ -0.61
RET2	YFR051C	NOC3	Q07896	663 aa	Predicted RBP	11.22	□□□□□ -0.61
RET2	YFR051C	TAO3	P40468	2376 aa		11.21	□□□□□ -0.61
RET2	YFR051C	MSS51	P32335	436 aa		11.21	□□□□□ -0.61
RET2	YFR051C	RFT1	P38206	574 aa	Predicted RBP	11.21	□□□□□ -0.61
RET2	YFR051C	GUA1	P38625	525 aa	Known RBP	11.21	□□□□□ -0.61
RET2	YFR051C	SAD1	P43589	448 aa		11.21	□□□□□ -0.61
RET2	YFR051C	COQ9	Q05779	260 aa		11.21	□□□□□ -0.61
RET2	YFR051C	RIF1	P29539	1916 aa		11.21	□□□□□ -0.61
RET2	YFR051C	FOB1	O13329	566 aa		11.2	□□□□□ -0.62
RET2	YFR051C	BMH1	P29311	267 aa	Known RBP	11.2	□□□□□ -0.62
RET2	YFR051C	SNF7	P39929	240 aa	Known RBP	11.2	□□□□□ -0.62
RET2	YFR051C	NUP82	P40368	713 aa		11.2	□□□□□ -0.62
RET2	YFR051C	HYR1	P40581	163 aa	Known RBP	11.2	□□□□□ -0.62
RET2	YFR051C	YNL115C	P53925	644 aa		11.2	□□□□□ -0.62
RET2	YFR051C	ISY1	P21374	235 aa	Predicted RBP	11.2	□□□□□ -0.62
RET2	YFR051C	ROX1	P25042	368 aa		11.2	□□□□□ -0.62
RET2	YFR051C	CDC15	P27636	974 aa		11.2	□□□□□ -0.62
RET2	YFR051C	GRS1	P38088	690 aa	Known RBP	11.2	□□□□□ -0.62
RET2	YFR051C	TVP23	P38962	199 aa		11.2	□□□□□ -0.62
RET2	YFR051C	TPO2	P53283	614 aa		11.2	□□□□□ -0.62
RET2	YFR051C	CUS1	Q02554	436 aa	Predicted RBP	11.2	□□□□□ -0.62
RET2	YFR051C	ROD1	Q02805	837 aa		11.2	□□□□□ -0.62
RET2	YFR051C	HIF1	Q12373	385 aa		11.2	□□□□□ -0.62
RET2	YFR051C	KEX1	P09620	729 aa		11.19	□□□□□ -0.62
RET2	YFR051C	DBP5	P20449	482 aa	Known RBP	11.19	□□□□□ -0.62
RET2	YFR051C	MSP1	P28737	362 aa		11.19	□□□□□ -0.62
RET2	YFR051C	PPS1	P38148	807 aa		11.19	□□□□□ -0.62
RET2	YFR051C	CCT5	P40413	562 aa	Known RBP	11.19	□□□□□ -0.62
RET2	YFR051C	VTC2	P43585	828 aa		11.19	□□□□□ -0.62
RET2	YFR051C	AVT1	P47082	602 aa		11.19	□□□□□ -0.62
RET2	YFR051C	RPC53	P25441	422 aa		11.18	□□□□□ -0.62
RET2	YFR051C	HFI1	Q12060	488 aa		11.18	□□□□□ -0.62
RET2	YFR051C	FOL2	P51601	243 aa	Known RBP	11.17	□□□□□ -0.62
RET2	YFR051C	CLC1	P17891	233 aa		11.17	□□□□□ -0.62
RET2	YFR051C	HIR1	P32479	840 aa		11.17	□□□□□ -0.62
RET2	YFR051C	ELM1	P32801	640 aa		11.17	□□□□□ -0.62
RET2	YFR051C	PGM2	P37012	569 aa	Known RBP	11.17	□□□□□ -0.62
RET2	YFR051C	ERC1	P38767	581 aa		11.17	□□□□□ -0.62
RET2	YFR051C	TOF1	P53840	1238 aa		11.17	□□□□□ -0.62
RET2	YFR051C	ARK1	P53974	638 aa		11.17	□□□□□ -0.62
RET2	YFR051C	VMS1	Q04311	632 aa	Known RBP	11.17	□□□□□ -0.62
RET2	YFR051C	DDP1	Q99321	188 aa	Known RBP	11.17	□□□□□ -0.62
RET2	YFR051C	HIP1	P06775	603 aa		11.16	□□□□□ -0.62
RET2	YFR051C	FUB1	P25659	250 aa		11.16	□□□□□ -0.62
RET2	YFR051C	SAC6	P32599	642 aa	Known RBP	11.16	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms