RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	PPH3	P32345	308 aa		4.58	□□□□□ -1.68
NUG1	YER006W	OLA1	P38219	394 aa	Known RBP	4.58	□□□□□ -1.68
NUG1	YER006W	SHC1	P39000	512 aa		4.58	□□□□□ -1.68
NUG1	YER006W	YRB1	P41920	201 aa	Known RBP	4.58	□□□□□ -1.68
NUG1	YER006W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
NUG1	YER006W	ESF2	P53743	316 aa	Known RBP	4.58	□□□□□ -1.68
NUG1	YER006W	YPL034W	Q03083	165 aa		4.58	□□□□□ -1.68
NUG1	YER006W	TMA64	Q04600	565 aa	Known RBP	4.58	□□□□□ -1.68
NUG1	YER006W	NAR1	P23503	491 aa	Known RBP	4.57	□□□□□ -1.68
NUG1	YER006W	SEC14	P24280	304 aa	Known RBP	4.57	□□□□□ -1.68
NUG1	YER006W	CDC48	P25694	835 aa	Known RBP	4.57	□□□□□ -1.68
NUG1	YER006W	COY1	P34237	679 aa		4.57	□□□□□ -1.68
NUG1	YER006W	MUM2	P38236	366 aa		4.57	□□□□□ -1.68
NUG1	YER006W	SSZ1	P38788	538 aa	Known RBP	4.57	□□□□□ -1.68
NUG1	YER006W	SIT1	P39980	628 aa		4.57	□□□□□ -1.68
NUG1	YER006W	FAF1	P40546	346 aa	Predicted RBP	4.57	□□□□□ -1.68
NUG1	YER006W	YGL140C	P53120	1219 aa		4.57	□□□□□ -1.68
NUG1	YER006W	BUD9	P53226	547 aa		4.57	□□□□□ -1.68
NUG1	YER006W	DNM1	P54861	757 aa		4.57	□□□□□ -1.68
NUG1	YER006W	CTF4	Q01454	927 aa		4.57	□□□□□ -1.68
NUG1	YER006W	GIS4	Q04233	774 aa		4.57	□□□□□ -1.68
NUG1	YER006W	LCD1	Q04377	747 aa		4.57	□□□□□ -1.68
NUG1	YER006W	ATG26	Q06321	1198 aa		4.57	□□□□□ -1.68
NUG1	YER006W	YDL121C	Q07541	149 aa		4.57	□□□□□ -1.68
NUG1	YER006W	TOM20	P35180	183 aa		4.57	□□□□□ -1.68
NUG1	YER006W	UBX7	P38349	436 aa		4.57	□□□□□ -1.68
NUG1	YER006W	YLF2	P38746	405 aa		4.57	□□□□□ -1.68
NUG1	YER006W	ETP1	P38748	585 aa	Known RBP	4.57	□□□□□ -1.68
NUG1	YER006W	BFA1	P47113	574 aa		4.57	□□□□□ -1.68
NUG1	YER006W	LSG1	P53145	640 aa	Known RBP	4.57	□□□□□ -1.68
NUG1	YER006W	FOX2	Q02207	900 aa	Known RBP	4.57	□□□□□ -1.68
NUG1	YER006W	UBX5	Q06682	500 aa		4.57	□□□□□ -1.68
NUG1	YER006W	YLR419W	Q06698	1435 aa	Known RBP	4.56	□□□□□ -1.68
NUG1	YER006W	PWP2	P25635	923 aa	Known RBP	4.56	□□□□□ -1.68
NUG1	YER006W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
NUG1	YER006W	ERC1	P38767	581 aa		4.56	□□□□□ -1.68
NUG1	YER006W	YMR102C	Q03177	834 aa		4.56	□□□□□ -1.68
NUG1	YER006W	ARO80	Q04052	950 aa		4.56	□□□□□ -1.68
NUG1	YER006W	CAB1	Q04430	367 aa		4.56	□□□□□ -1.68
NUG1	YER006W	SLK19	Q08581	821 aa	Known RBP	4.56	□□□□□ -1.68
NUG1	YER006W	HMI1	Q12039	706 aa		4.56	□□□□□ -1.68
NUG1	YER006W	ERP4	Q12450	207 aa		4.56	□□□□□ -1.68
NUG1	YER006W	FKS3	Q04952	1785 aa		4.55	□□□□□ -1.68
NUG1	YER006W	MRPL33	P20084	86 aa		4.55	□□□□□ -1.68
NUG1	YER006W	MRPS28	P21771	286 aa		4.55	□□□□□ -1.68
NUG1	YER006W	VMA3	P25515	160 aa		4.55	□□□□□ -1.68
NUG1	YER006W	RAD16	P31244	790 aa		4.55	□□□□□ -1.68
NUG1	YER006W	SUV3	P32580	737 aa		4.55	□□□□□ -1.68
NUG1	YER006W	YME2	P32843	850 aa		4.55	□□□□□ -1.68
NUG1	YER006W	GDT1	P38301	280 aa	Predicted RBP	4.55	□□□□□ -1.68
NUG1	YER006W	UTP18	P40362	594 aa	Predicted RBP	4.55	□□□□□ -1.68
NUG1	YER006W	ENP2	P48234	707 aa	Known RBP	4.55	□□□□□ -1.68
NUG1	YER006W	ELA1	P53861	379 aa	Predicted RBP	4.55	□□□□□ -1.68
NUG1	YER006W	ARP5	P53946	755 aa		4.55	□□□□□ -1.68
NUG1	YER006W	TIM11	P81449	96 aa	Predicted RBP	4.55	□□□□□ -1.68
NUG1	YER006W	UBX2	Q04228	584 aa		4.55	□□□□□ -1.68
NUG1	YER006W	ENT2	Q05785	613 aa		4.55	□□□□□ -1.68
NUG1	YER006W	PSK1	P31374	1356 aa		4.55	□□□□□ -1.68
NUG1	YER006W	ARD1	P07347	238 aa	Predicted RBP	4.54	□□□□□ -1.68
NUG1	YER006W	HMG1	P12683	1054 aa		4.54	□□□□□ -1.68
NUG1	YER006W	VMA4	P22203	233 aa	Known RBP	4.54	□□□□□ -1.68
NUG1	YER006W	PHO84	P25297	587 aa	Known RBP	4.54	□□□□□ -1.68
NUG1	YER006W	MET4	P32389	672 aa		4.54	□□□□□ -1.68
NUG1	YER006W	MIC60	P36112	540 aa		4.54	□□□□□ -1.68
NUG1	YER006W	EFM2	P38347	419 aa		4.54	□□□□□ -1.68
NUG1	YER006W	DYS1	P38791	387 aa		4.54	□□□□□ -1.68
NUG1	YER006W	PMC1	P38929	1173 aa	Predicted RBP	4.54	□□□□□ -1.68
NUG1	YER006W	VPS41	P38959	992 aa		4.54	□□□□□ -1.68
NUG1	YER006W	UBP12	P39538	1254 aa		4.54	□□□□□ -1.68
NUG1	YER006W	SDS3	P40505	327 aa		4.54	□□□□□ -1.68
NUG1	YER006W	YIR042C	P40586	236 aa		4.54	□□□□□ -1.68
NUG1	YER006W	SAP155	P43612	1002 aa		4.54	□□□□□ -1.68
NUG1	YER006W	EAF6	P47128	113 aa		4.54	□□□□□ -1.68
NUG1	YER006W	INP52	P50942	1183 aa		4.54	□□□□□ -1.68
NUG1	YER006W	YDR338C	Q05497	695 aa		4.54	□□□□□ -1.68
NUG1	YER006W	CLP1	Q08685	445 aa	Predicted RBP	4.54	□□□□□ -1.68
NUG1	YER006W	SNF2	P22082	1703 aa		4.54	□□□□□ -1.68
NUG1	YER006W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.53	□□□□□ -1.68
NUG1	YER006W	AI3	P03877	415 aa		4.53	□□□□□ -1.68
NUG1	YER006W	CTT1	P06115	562 aa		4.53	□□□□□ -1.68
NUG1	YER006W	PET494	P07390	489 aa	Predicted RBP	4.53	□□□□□ -1.68
NUG1	YER006W	SEC23	P15303	768 aa	Known RBP	4.53	□□□□□ -1.68
NUG1	YER006W	IDI1	P15496	288 aa		4.53	□□□□□ -1.68
NUG1	YER006W	CDC10	P25342	322 aa	Known RBP	4.53	□□□□□ -1.68
NUG1	YER006W	BUD14	P27637	709 aa		4.53	□□□□□ -1.68
NUG1	YER006W	NIP100	P33420	868 aa		4.53	□□□□□ -1.68
NUG1	YER006W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
NUG1	YER006W	MRPL40	P36534	297 aa		4.53	□□□□□ -1.68
NUG1	YER006W	TAF5	P38129	798 aa		4.53	□□□□□ -1.68
NUG1	YER006W	YBR197C	P38306	217 aa		4.53	□□□□□ -1.68
NUG1	YER006W	RRM3	P38766	723 aa		4.53	□□□□□ -1.68
NUG1	YER006W	GGA2	P38817	585 aa	Known RBP	4.53	□□□□□ -1.68
NUG1	YER006W	YHR218W	P38899	603 aa		4.53	□□□□□ -1.68
NUG1	YER006W	YER156C	P40093	338 aa	Known RBP	4.53	□□□□□ -1.68
NUG1	YER006W	MET18	P40469	1032 aa		4.53	□□□□□ -1.68
NUG1	YER006W	CEP3	P40969	608 aa		4.53	□□□□□ -1.68
NUG1	YER006W	LAM5	P43560	674 aa		4.53	□□□□□ -1.68
NUG1	YER006W	STU2	P46675	888 aa		4.53	□□□□□ -1.68
NUG1	YER006W	SQS1	P53866	767 aa	Known RBP	4.53	□□□□□ -1.68
NUG1	YER006W	SRP1	Q02821	542 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms