RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W SGD1Q06132 899 aa3.68□□□□□ -1.82
SIZ1YDR409W YDR306CQ06640 478 aa3.68□□□□□ -1.82
SIZ1YDR409W PIB1Q06651 286 aa3.68□□□□□ -1.82
SIZ1YDR409W SSP2Q08646 371 aa3.68□□□□□ -1.82
SIZ1YDR409W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
SIZ1YDR409W TY1A-BRQ12217 440 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-NL2Q12470 440 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-GR2Q12485 440 aa3.68□□□□□ -1.82
SIZ1YDR409W CPA2P03965 1118 aaKnown RBP3.67□□□□□ -1.82
SIZ1YDR409W CDC31P06704 161 aaKnown RBP3.67□□□□□ -1.82
SIZ1YDR409W PRE9P23638 258 aaKnown RBP3.67□□□□□ -1.82
SIZ1YDR409W THI4P32318 326 aa3.67□□□□□ -1.82
SIZ1YDR409W YHL041WP38730 149 aa3.67□□□□□ -1.82
SIZ1YDR409W MGS1P40151 587 aa3.67□□□□□ -1.82
SIZ1YDR409W YPT11P48559 417 aa3.67□□□□□ -1.82
SIZ1YDR409W CTF18P49956 741 aa3.67□□□□□ -1.82
SIZ1YDR409W YGR237CP50089 785 aa3.67□□□□□ -1.82
SIZ1YDR409W YGR016WP53209 190 aa3.67□□□□□ -1.82
SIZ1YDR409W RIA1P53893 1110 aa3.67□□□□□ -1.82
SIZ1YDR409W TLG2Q08144 397 aa3.67□□□□□ -1.82
SIZ1YDR409W YPL191CQ08930 360 aa3.67□□□□□ -1.82
SIZ1YDR409W GPA1P08539 472 aa3.67□□□□□ -1.82
SIZ1YDR409W SRP54P20424 541 aaKnown RBP3.67□□□□□ -1.82
SIZ1YDR409W CLN2P20438 545 aa3.67□□□□□ -1.82
SIZ1YDR409W RDS1P25611 832 aa3.67□□□□□ -1.82
SIZ1YDR409W TFC4P33339 1025 aa3.67□□□□□ -1.82
SIZ1YDR409W MTC2P34246 357 aa3.67□□□□□ -1.82
SIZ1YDR409W ECM21P38167 1117 aaKnown RBP3.67□□□□□ -1.82
SIZ1YDR409W APE4P38821 490 aa3.67□□□□□ -1.82
SIZ1YDR409W ERR3P42222 437 aa3.67□□□□□ -1.82
SIZ1YDR409W TIM54P47045 478 aa3.67□□□□□ -1.82
SIZ1YDR409W CSC1Q06538 782 aa3.67□□□□□ -1.82
SIZ1YDR409W TY4B-PA0A0B7P3V8 1104 aa3.66□□□□□ -1.82
SIZ1YDR409W SPT16P32558 1035 aaKnown RBP3.66□□□□□ -1.82
SIZ1YDR409W VPS35P34110 944 aa3.66□□□□□ -1.82
SIZ1YDR409W KTR4P38131 464 aa3.66□□□□□ -1.82
SIZ1YDR409W SOH1P38633 127 aa3.66□□□□□ -1.82
SIZ1YDR409W SPO22P40511 975 aa3.66□□□□□ -1.82
SIZ1YDR409W YNL115CP53925 644 aa3.66□□□□□ -1.82
SIZ1YDR409W GYL1Q04322 720 aa3.66□□□□□ -1.82
SIZ1YDR409W YDR286CQ05530 114 aa3.66□□□□□ -1.82
SIZ1YDR409W REH1Q06709 432 aa3.66□□□□□ -1.82
SIZ1YDR409W FMP25Q08023 583 aa3.66□□□□□ -1.82
SIZ1YDR409W ELG1Q12050 791 aa3.66□□□□□ -1.82
SIZ1YDR409W TY4A-HQ6Q5P6 413 aa3.66□□□□□ -1.82
SIZ1YDR409W ILS1P09436 1072 aaKnown RBP3.66□□□□□ -1.82
SIZ1YDR409W MRP7P12687 371 aa3.66□□□□□ -1.82
SIZ1YDR409W MCM10P32354 571 aa3.66□□□□□ -1.82
SIZ1YDR409W RFT1P38206 574 aaPredicted RBP3.66□□□□□ -1.82
SIZ1YDR409W YBR238CP38330 731 aaKnown RBP3.66□□□□□ -1.82
SIZ1YDR409W GTT3P39996 337 aa3.66□□□□□ -1.82
SIZ1YDR409W ATH1P48016 1211 aa3.66□□□□□ -1.82
SIZ1YDR409W YPL109CQ02981 657 aa3.66□□□□□ -1.82
SIZ1YDR409W TRS130Q03660 1102 aa3.66□□□□□ -1.82
SIZ1YDR409W THI73Q07904 523 aa3.66□□□□□ -1.82
SIZ1YDR409W FKS3Q04952 1785 aa3.66□□□□□ -1.82
SIZ1YDR409W GSY2P27472 705 aa3.65□□□□□ -1.82
SIZ1YDR409W DBF20P32328 564 aa3.65□□□□□ -1.82
SIZ1YDR409W ANP1P32629 500 aa3.65□□□□□ -1.82
SIZ1YDR409W PXL1P36166 706 aa3.65□□□□□ -1.82
SIZ1YDR409W MAL33P38157 468 aa3.65□□□□□ -1.82
SIZ1YDR409W KIC1P38692 1080 aa3.65□□□□□ -1.82
SIZ1YDR409W RRF1P38771 230 aa3.65□□□□□ -1.82
SIZ1YDR409W YAP1801P38856 637 aa3.65□□□□□ -1.82
SIZ1YDR409W CTK3P46963 296 aaPredicted RBP3.65□□□□□ -1.82
SIZ1YDR409W MRPS35P53292 345 aa3.65□□□□□ -1.82
SIZ1YDR409W YNL193WP53870 558 aa3.65□□□□□ -1.82
SIZ1YDR409W TFB2Q02939 513 aa3.65□□□□□ -1.82
SIZ1YDR409W PRP3Q03338 469 aaPredicted RBP3.65□□□□□ -1.82
SIZ1YDR409W WAR1Q03631 944 aa3.65□□□□□ -1.82
SIZ1YDR409W YPL066WQ12194 479 aa3.65□□□□□ -1.82
SIZ1YDR409W MDM12Q92328 271 aa3.65□□□□□ -1.82
SIZ1YDR409W SPO16P17122 198 aa3.65□□□□□ -1.83
SIZ1YDR409W APM2P38700 605 aa3.65□□□□□ -1.83
SIZ1YDR409W YER130CP39959 443 aa3.65□□□□□ -1.83
SIZ1YDR409W IES1P43579 692 aa3.65□□□□□ -1.83
SIZ1YDR409W HOS2P53096 452 aaPredicted RBP3.65□□□□□ -1.83
SIZ1YDR409W MEP3P53390 489 aa3.65□□□□□ -1.83
SIZ1YDR409W YNL035CP53962 389 aaKnown RBP3.65□□□□□ -1.83
SIZ1YDR409W YNL011CP53980 444 aa3.65□□□□□ -1.83
SIZ1YDR409W NAN1Q02931 896 aaKnown RBP3.65□□□□□ -1.83
SIZ1YDR409W SRC1Q03707 834 aa3.65□□□□□ -1.83
SIZ1YDR409W GRC3Q07845 632 aa3.65□□□□□ -1.83
SIZ1YDR409W TMA7Q3E764 64 aaKnown RBP3.65□□□□□ -1.83
SIZ1YDR409W TOP3P13099 656 aa3.64□□□□□ -1.83
SIZ1YDR409W MET8P15807 274 aa3.64□□□□□ -1.83
SIZ1YDR409W UGA3P26370 528 aa3.64□□□□□ -1.83
SIZ1YDR409W HSP104P31539 908 aaKnown RBP3.64□□□□□ -1.83
SIZ1YDR409W DAL3P32459 195 aa3.64□□□□□ -1.83
SIZ1YDR409W NAB2P32505 525 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SIZ1YDR409W HBS1P32769 611 aaKnown RBP3.64□□□□□ -1.83
SIZ1YDR409W IXR1P33417 597 aa3.64□□□□□ -1.83
SIZ1YDR409W RRM3P38766 723 aa3.64□□□□□ -1.83
SIZ1YDR409W TPA1P40032 644 aaKnown RBP3.64□□□□□ -1.83
SIZ1YDR409W TFG2P41896 400 aaPredicted RBP3.64□□□□□ -1.83
SIZ1YDR409W RGD2P43556 714 aa3.64□□□□□ -1.83
SIZ1YDR409W BFA1P47113 574 aa3.64□□□□□ -1.83
SIZ1YDR409W MAL13P53338 473 aa3.64□□□□□ -1.83
SIZ1YDR409W UBP10P53874 792 aaPredicted RBP3.64□□□□□ -1.83
SIZ1YDR409W MOT3P54785 490 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms