RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeastyeast

Gene DPB4, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB4YDR121W RPN4Q03465 531 aa5.06□□□□□ -1.6
DPB4YDR121W DFG5Q05031 458 aa5.06□□□□□ -1.6
DPB4YDR121W CDC60P26637 1090 aaKnown RBP5.05□□□□□ -1.6
DPB4YDR121W MKS1P34072 584 aa5.05□□□□□ -1.6
DPB4YDR121W VPS35P34110 944 aa5.05□□□□□ -1.6
DPB4YDR121W OCT1P35999 772 aa5.05□□□□□ -1.6
DPB4YDR121W YBL028CP38202 106 aa5.05□□□□□ -1.6
DPB4YDR121W FAA3P39002 694 aa5.05□□□□□ -1.6
DPB4YDR121W SAM37P50110 327 aa5.05□□□□□ -1.6
DPB4YDR121W YNL193WP53870 558 aa5.05□□□□□ -1.6
DPB4YDR121W CDC55Q00362 526 aa5.05□□□□□ -1.6
DPB4YDR121W OXR1Q08952 273 aa5.05□□□□□ -1.6
DPB4YDR121W DAT1P13483 248 aaKnown RBP5.04□□□□□ -1.6
DPB4YDR121W STI1P15705 589 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
DPB4YDR121W MCD4P36051 919 aa5.04□□□□□ -1.6
DPB4YDR121W LDH1P38139 375 aa5.04□□□□□ -1.6
DPB4YDR121W HXT5P38695 592 aa5.04□□□□□ -1.6
DPB4YDR121W YNL011CP53980 444 aa5.04□□□□□ -1.6
DPB4YDR121W RPN7Q06103 429 aaKnown RBP5.04□□□□□ -1.6
DPB4YDR121W CFT2Q12102 859 aaPredicted RBP5.04□□□□□ -1.6
DPB4YDR121W RRI2Q12348 645 aa5.04□□□□□ -1.6
DPB4YDR121W YOR131CQ12486 218 aa5.04□□□□□ -1.6
DPB4YDR121W RAD2P07276 1031 aa5.03□□□□□ -1.6
DPB4YDR121W STE6P12866 1290 aa5.03□□□□□ -1.6
DPB4YDR121W MRPL33P20084 86 aa5.03□□□□□ -1.6
DPB4YDR121W MNR2P35724 969 aa5.03□□□□□ -1.6
DPB4YDR121W TBS1P38114 1094 aa5.03□□□□□ -1.6
DPB4YDR121W CIC1P38779 376 aaKnown RBP5.03□□□□□ -1.6
DPB4YDR121W BUD6P41697 788 aa5.03□□□□□ -1.6
DPB4YDR121W NRD1P53617 575 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
DPB4YDR121W POB3Q04636 552 aaKnown RBP5.03□□□□□ -1.6
DPB4YDR121W PCL8Q08966 492 aa5.03□□□□□ -1.6
DPB4YDR121W TY3A-GQ12173 290 aa5.03□□□□□ -1.6
DPB4YDR121W TY3A-IQ99219 290 aa5.03□□□□□ -1.6
DPB4YDR121W RPS19AP07280 144 aaKnown RBP5.02□□□□□ -1.61
DPB4YDR121W RPS19BP07281 144 aaPredicted RBP5.02□□□□□ -1.61
DPB4YDR121W PRI2P20457 528 aa5.02□□□□□ -1.61
DPB4YDR121W FIR1P40020 876 aa5.02□□□□□ -1.61
DPB4YDR121W LYS14P40971 790 aa5.02□□□□□ -1.61
DPB4YDR121W CUZ1P53899 274 aa5.02□□□□□ -1.61
DPB4YDR121W ISU1Q03020 165 aa5.02□□□□□ -1.61
DPB4YDR121W ECM30Q06673 1274 aa5.02□□□□□ -1.61
DPB4YDR121W UBX5Q06682 500 aa5.02□□□□□ -1.61
DPB4YDR121W YDL124WQ07551 312 aaKnown RBP5.02□□□□□ -1.61
DPB4YDR121W NOC3Q07896 663 aaPredicted RBP5.02□□□□□ -1.61
DPB4YDR121W ICL2Q12031 575 aa5.02□□□□□ -1.61
DPB4YDR121W UBR2Q07963 1872 aa5.02□□□□□ -1.61
DPB4YDR121W AI1P03875 834 aa5.01□□□□□ -1.61
DPB4YDR121W HXK1P04806 485 aaKnown RBP5.01□□□□□ -1.61
DPB4YDR121W FBP26P32604 452 aa5.01□□□□□ -1.61
DPB4YDR121W GRX7P38068 203 aa5.01□□□□□ -1.61
DPB4YDR121W YHL008CP38750 627 aa5.01□□□□□ -1.61
DPB4YDR121W AFG3P39925 761 aa5.01□□□□□ -1.61
DPB4YDR121W NOP2P40991 618 aaKnown RBP5.01□□□□□ -1.61
DPB4YDR121W FAA4P47912 694 aaKnown RBP5.01□□□□□ -1.61
DPB4YDR121W HUL5P53119 910 aa5.01□□□□□ -1.61
DPB4YDR121W BRE5P53741 515 aaKnown RBP5.01□□□□□ -1.61
DPB4YDR121W GDE1Q02979 1223 aa5.01□□□□□ -1.61
DPB4YDR121W BSC2Q05611 235 aa5.01□□□□□ -1.61
DPB4YDR121W THI72Q08579 599 aa5.01□□□□□ -1.61
DPB4YDR121W WTM2Q12206 467 aa5.01□□□□□ -1.61
DPB4YDR121W PIF1P07271 859 aa5□□□□□ -1.61
DPB4YDR121W KRS1P15180 591 aaKnown RBP5□□□□□ -1.61
DPB4YDR121W SMC1P32908 1225 aa5□□□□□ -1.61
DPB4YDR121W TOM20P35180 183 aa5□□□□□ -1.61
DPB4YDR121W KTR3P38130 404 aaPredicted RBP5□□□□□ -1.61
DPB4YDR121W TAT2P38967 592 aa5□□□□□ -1.61
DPB4YDR121W TIF4631P39935 952 aaKnown RBP5□□□□□ -1.61
DPB4YDR121W VAB2P40003 282 aa5□□□□□ -1.61
DPB4YDR121W HXT8P40886 569 aa5□□□□□ -1.61
DPB4YDR121W MSH4P40965 878 aaPredicted RBP5□□□□□ -1.61
DPB4YDR121W PIP2P52960 996 aa5□□□□□ -1.61
DPB4YDR121W DAL4Q04895 635 aa5□□□□□ -1.61
DPB4YDR121W SUT2Q12286 268 aa5□□□□□ -1.61
DPB4YDR121W RPP0P05317 312 aaKnown RBP4.99□□□□□ -1.61
DPB4YDR121W VMA3P25515 160 aa4.99□□□□□ -1.61
DPB4YDR121W DAL1P32375 460 aa4.99□□□□□ -1.61
DPB4YDR121W BCS1P32839 456 aa4.99□□□□□ -1.61
DPB4YDR121W SCD5P34758 872 aa4.99□□□□□ -1.61
DPB4YDR121W UIP5P36137 443 aa4.99□□□□□ -1.61
DPB4YDR121W CST26P38226 397 aa4.99□□□□□ -1.61
DPB4YDR121W MNN1P39106 762 aa4.99□□□□□ -1.61
DPB4YDR121W TIM54P47045 478 aa4.99□□□□□ -1.61
DPB4YDR121W YJR142WP47173 342 aa4.99□□□□□ -1.61
DPB4YDR121W YPQ2Q06328 317 aa4.99□□□□□ -1.61
DPB4YDR121W KEL3Q08979 651 aaPredicted RBP4.99□□□□□ -1.61
DPB4YDR121W LAP2Q10740 671 aa4.99□□□□□ -1.61
DPB4YDR121W CYB2P00175 591 aa4.98□□□□□ -1.61
DPB4YDR121W MET6P05694 767 aaKnown RBP4.98□□□□□ -1.61
DPB4YDR121W MCM1P11746 286 aa4.98□□□□□ -1.61
DPB4YDR121W PRE10P21242 288 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
DPB4YDR121W EUG1P32474 517 aa4.98□□□□□ -1.61
DPB4YDR121W GCD7P32502 381 aaPredicted RBP4.98□□□□□ -1.61
DPB4YDR121W TIM23P32897 222 aa4.98□□□□□ -1.61
DPB4YDR121W WHI3P34761 661 aaKnown RBP4.98□□□□□ -1.61
DPB4YDR121W RAD55P38953 406 aa4.98□□□□□ -1.61
DPB4YDR121W NUP82P40368 713 aa4.98□□□□□ -1.61
DPB4YDR121W RSC4Q02206 625 aa4.98□□□□□ -1.61
DPB4YDR121W YPL034WQ03083 165 aa4.98□□□□□ -1.61
DPB4YDR121W EAR1Q03212 550 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 96.1 ms