RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BRE4	YDL231C	YML037C	Q03703	340 aa		4.61	□□□□□ -1.67
BRE4	YDL231C	HKR1	P41809	1802 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	GYP6	P32806	458 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	OCA5	P38738	679 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	ERC1	P38767	581 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	CTM1	P38818	585 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	YFL034W	P43564	1073 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	UBP15	P50101	1230 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	MTC3	P53077	123 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	CHS2	P14180	963 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	SLD2	P34252	453 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	ERG7	P38604	731 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	BUL2	Q03758	920 aa	Known RBP	4.6	□□□□□ -1.67
BRE4	YDL231C	YAP7	Q08182	245 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	ARP6	Q12509	438 aa		4.6	□□□□□ -1.67
BRE4	YDL231C	RPC53	P25441	422 aa		4.59	□□□□□ -1.67
BRE4	YDL231C	GDT1	P38301	280 aa	Predicted RBP	4.59	□□□□□ -1.67
BRE4	YDL231C	TOM71	P38825	639 aa	Known RBP	4.59	□□□□□ -1.67
BRE4	YDL231C	VPS53	P47061	822 aa		4.59	□□□□□ -1.67
BRE4	YDL231C	CNM67	P53865	581 aa	Known RBP	4.59	□□□□□ -1.67
BRE4	YDL231C	YDR090C	Q03193	310 aa		4.59	□□□□□ -1.67
BRE4	YDL231C	SLD5	Q03406	294 aa		4.59	□□□□□ -1.67
BRE4	YDL231C	MRF1	P30775	413 aa	Predicted RBP	4.59	□□□□□ -1.67
BRE4	YDL231C	YJL007C	P47080	104 aa		4.59	□□□□□ -1.67
BRE4	YDL231C	ACF4	P47129	309 aa		4.59	□□□□□ -1.67
BRE4	YDL231C	YGL138C	P53122	345 aa		4.59	□□□□□ -1.67
BRE4	YDL231C	ISA1	Q07821	250 aa	Predicted RBP	4.59	□□□□□ -1.67
BRE4	YDL231C	SSA1	P10591	642 aa	Known RBP	4.59	□□□□□ -1.68
BRE4	YDL231C	SPO12	P17123	173 aa		4.59	□□□□□ -1.68
BRE4	YDL231C	SRP54	P20424	541 aa	Known RBP	4.59	□□□□□ -1.68
BRE4	YDL231C	KIC1	P38692	1080 aa		4.59	□□□□□ -1.68
BRE4	YDL231C	IES1	P43579	692 aa		4.59	□□□□□ -1.68
BRE4	YDL231C	YGR117C	P53270	476 aa		4.59	□□□□□ -1.68
BRE4	YDL231C	YMR114C	Q04471	368 aa	Known RBP	4.59	□□□□□ -1.68
BRE4	YDL231C	SHM1	P37292	490 aa	Predicted RBP	4.58	□□□□□ -1.68
BRE4	YDL231C	CBR1	P38626	284 aa	Known RBP	4.58	□□□□□ -1.68
BRE4	YDL231C	YAP5	P40574	245 aa		4.58	□□□□□ -1.68
BRE4	YDL231C	TOM70	P07213	617 aa	Known RBP	4.58	□□□□□ -1.68
BRE4	YDL231C	ERG12	P07277	443 aa		4.58	□□□□□ -1.68
BRE4	YDL231C	RAD18	P10862	487 aa		4.58	□□□□□ -1.68
BRE4	YDL231C	MAP2	P38174	421 aa	Known RBP	4.58	□□□□□ -1.68
BRE4	YDL231C	PHO88	P38264	188 aa	Predicted RBP	4.58	□□□□□ -1.68
BRE4	YDL231C	SMC2	P38989	1170 aa	Known RBP	4.58	□□□□□ -1.68
BRE4	YDL231C	AVT1	P47082	602 aa		4.58	□□□□□ -1.68
BRE4	YDL231C	CCM1	P48237	864 aa	Predicted RBP	4.58	□□□□□ -1.68
BRE4	YDL231C	JJJ1	P53863	590 aa		4.58	□□□□□ -1.68
BRE4	YDL231C	UTP5	Q04177	643 aa	Known RBP	4.58	□□□□□ -1.68
BRE4	YDL231C	GYL1	Q04322	720 aa		4.58	□□□□□ -1.68
BRE4	YDL231C	SOV1	Q04748	898 aa		4.58	□□□□□ -1.68
BRE4	YDL231C	UTP13	Q05946	817 aa	Known RBP	4.58	□□□□□ -1.68
BRE4	YDL231C	DUS3	Q06053	668 aa	Known RBP	4.58	□□□□□ -1.68
BRE4	YDL231C	KIN1	P13185	1064 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	DBP5	P20449	482 aa	Known RBP	4.57	□□□□□ -1.68
BRE4	YDL231C	NPL4	P33755	580 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	MIP6	P38760	659 aa	Known RBP	4.57	□□□□□ -1.68
BRE4	YDL231C	VTC2	P43585	828 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	CWC15	Q03772	175 aa	Known RBP	4.57	□□□□□ -1.68
BRE4	YDL231C	VPS38	Q05919	439 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	ZRT2	Q12436	422 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	GAL2	P13181	574 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	VMA2	P16140	517 aa	Known RBP	4.57	□□□□□ -1.68
BRE4	YDL231C	ALG1	P16661	449 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	GLC3	P32775	704 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	IXR1	P33417	597 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	GAA1	P39012	614 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	ATG1	P53104	897 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	YML082W	Q04533	649 aa	Known RBP	4.57	□□□□□ -1.68
BRE4	YDL231C	SUB2	Q07478	446 aa	Known RBP	4.57	□□□□□ -1.68
BRE4	YDL231C	CLN3	P13365	580 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	TRK2	P28584	889 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	REG2	P38232	338 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	CCT3	P39077	534 aa	Known RBP	4.57	□□□□□ -1.68
BRE4	YDL231C	CAF130	P53280	1122 aa	Predicted RBP	4.57	□□□□□ -1.68
BRE4	YDL231C	YOR059C	Q08448	450 aa	Known RBP	4.57	□□□□□ -1.68
BRE4	YDL231C	YLL058W	Q12198	575 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	CLF1	Q12309	687 aa	Predicted RBP	4.57	□□□□□ -1.68
BRE4	YDL231C	TAO3	P40468	2376 aa		4.57	□□□□□ -1.68
BRE4	YDL231C	BMH1	P29311	267 aa	Known RBP	4.56	□□□□□ -1.68
BRE4	YDL231C	STU2	P46675	888 aa		4.56	□□□□□ -1.68
BRE4	YDL231C	CUE3	P53137	624 aa	Known RBP	4.56	□□□□□ -1.68
BRE4	YDL231C	LIF1	P53150	421 aa		4.56	□□□□□ -1.68
BRE4	YDL231C	FPK1	P53739	893 aa		4.56	□□□□□ -1.68
BRE4	YDL231C	ECM23	Q02710	187 aa		4.56	□□□□□ -1.68
BRE4	YDL231C	CWC21	Q03375	135 aa	Known RBP	4.56	□□□□□ -1.68
BRE4	YDL231C	RGA2	Q06407	1009 aa		4.56	□□□□□ -1.68
BRE4	YDL231C	RTG2	P32608	588 aa	Known RBP	4.56	□□□□□ -1.68
BRE4	YDL231C	OCT1	P35999	772 aa		4.56	□□□□□ -1.68
BRE4	YDL231C	UBP13	P38187	747 aa		4.56	□□□□□ -1.68
BRE4	YDL231C	UBC1	P21734	215 aa	Known RBP	4.56	□□□□□ -1.68
BRE4	YDL231C	YEL1	P34225	687 aa		4.56	□□□□□ -1.68
BRE4	YDL231C	KAP123	P40069	1113 aa	Known RBP	4.56	□□□□□ -1.68
BRE4	YDL231C	HSH155	P49955	971 aa	Known RBP	4.56	□□□□□ -1.68
BRE4	YDL231C	RET3	P53600	189 aa		4.56	□□□□□ -1.68
BRE4	YDL231C	NCS2	P53923	493 aa	Predicted RBP	4.56	□□□□□ -1.68
BRE4	YDL231C	ORC4	P54791	529 aa		4.56	□□□□□ -1.68
BRE4	YDL231C	SLX4	Q12098	748 aa		4.56	□□□□□ -1.68
BRE4	YDL231C	ESS1	P22696	170 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	UTR4	P32626	227 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	BIM1	P40013	344 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	SHQ1	P40486	507 aa	Predicted RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms