RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	MET6	P05694	767 aa	Known RBP	6.25	□□□□□ -1.41
SUB2	YDL084W	TRK1	P12685	1235 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	SEC2	P17065	759 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	RPC31	P17890	251 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	OCA4	P25366	362 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	SRO9	P25567	434 aa	Known RBP	6.25	□□□□□ -1.41
SUB2	YDL084W	CPS1	P27614	576 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	BUD2	P33314	1104 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	NOP4	P37838	685 aa	Known RBP	6.25	□□□□□ -1.41
SUB2	YDL084W	SLN1	P39928	1220 aa	Predicted RBP	6.25	□□□□□ -1.41
SUB2	YDL084W	VAC8	P39968	578 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	SPR3	P41901	512 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	NUP85	P46673	744 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	NUP42	P49686	430 aa	Known RBP	6.25	□□□□□ -1.41
SUB2	YDL084W	DIP5	P53388	608 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	FMP30	Q02883	468 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	STE20	Q03497	939 aa	Known RBP	6.25	□□□□□ -1.41
SUB2	YDL084W	INP2	Q03824	705 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	MCP2	Q06567	569 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	LOT6	Q07923	191 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	SMC6	Q12749	1114 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	TMA7	Q3E764	64 aa	Known RBP	6.25	□□□□□ -1.41
SUB2	YDL084W	ATP4	P05626	244 aa		6.24	□□□□□ -1.41
SUB2	YDL084W	PIF1	P07271	859 aa		6.24	□□□□□ -1.41
SUB2	YDL084W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
SUB2	YDL084W	KAR2	P16474	682 aa	Known RBP	6.24	□□□□□ -1.41
SUB2	YDL084W	REC107	P21651	314 aa		6.24	□□□□□ -1.41
SUB2	YDL084W	YEL043W	P32618	956 aa		6.24	□□□□□ -1.41
SUB2	YDL084W	AFR1	P33304	620 aa		6.24	□□□□□ -1.41
SUB2	YDL084W	LHS1	P36016	881 aa		6.24	□□□□□ -1.41
SUB2	YDL084W	MAK5	P38112	773 aa	Predicted RBP	6.24	□□□□□ -1.41
SUB2	YDL084W	OSH3	P38713	996 aa	Known RBP	6.24	□□□□□ -1.41
SUB2	YDL084W	PCL7	P40186	285 aa		6.24	□□□□□ -1.41
SUB2	YDL084W	YJL055W	P47044	245 aa		6.24	□□□□□ -1.41
SUB2	YDL084W	POL32	P47110	350 aa		6.24	□□□□□ -1.41
SUB2	YDL084W	SEC5	P89102	971 aa		6.24	□□□□□ -1.41
SUB2	YDL084W	YIG1	Q08956	461 aa		6.24	□□□□□ -1.41
SUB2	YDL084W	YOR131C	Q12486	218 aa		6.24	□□□□□ -1.41
SUB2	YDL084W	TRX1	P22217	103 aa	Known RBP	6.23	□□□□□ -1.41
SUB2	YDL084W	MSH2	P25847	964 aa		6.23	□□□□□ -1.41
SUB2	YDL084W	TPS2	P31688	896 aa	Known RBP	6.23	□□□□□ -1.41
SUB2	YDL084W	ASF2	P32448	525 aa	Predicted RBP	6.23	□□□□□ -1.41
SUB2	YDL084W	XRS2	P33301	854 aa		6.23	□□□□□ -1.41
SUB2	YDL084W	CNS1	P33313	385 aa		6.23	□□□□□ -1.41
SUB2	YDL084W	KIC1	P38692	1080 aa		6.23	□□□□□ -1.41
SUB2	YDL084W	AIM10	P39965	576 aa	Known RBP	6.23	□□□□□ -1.41
SUB2	YDL084W	ROK1	P45818	564 aa	Predicted RBP	6.23	□□□□□ -1.41
SUB2	YDL084W	YJL049W	P47048	450 aa		6.23	□□□□□ -1.41
SUB2	YDL084W	ENT3	P47160	408 aa		6.23	□□□□□ -1.41
SUB2	YDL084W	MIG2	P53035	382 aa		6.23	□□□□□ -1.41
SUB2	YDL084W	SPN1	Q06505	410 aa	Predicted RBP	6.23	□□□□□ -1.41
SUB2	YDL084W	ADY3	Q07732	790 aa		6.23	□□□□□ -1.41
SUB2	YDL084W	EDE1	P34216	1381 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	PBS2	P08018	668 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	VPS3	P23643	1011 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	SEC14	P24280	304 aa	Known RBP	6.22	□□□□□ -1.41
SUB2	YDL084W	MET4	P32389	672 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	MOT2	P34909	587 aa	Known RBP	6.22	□□□□□ -1.41
SUB2	YDL084W	YKL222C	P35995	705 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	not detected
SUB2	YDL084W	DED81	P38707	554 aa	Known RBP	6.22	□□□□□ -1.41
SUB2	YDL084W	CRP1	P38845	465 aa	Known RBP	6.22	□□□□□ -1.41
SUB2	YDL084W	YHR219W	P38900	624 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	TOK1	P40310	691 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	RPL34B	P40525	121 aa	Known RBP	6.22	□□□□□ -1.41
SUB2	YDL084W	YIR014W	P40570	242 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	ZIM17	P42844	174 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	YJL007C	P47080	104 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	RIM21	P48565	533 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	UBP15	P50101	1230 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	FOL2	P51601	243 aa	Known RBP	6.22	□□□□□ -1.41
SUB2	YDL084W	IPI3	P53877	555 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	YML108W	Q03759	105 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	UBX2	Q04228	584 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	TRM8	Q12009	286 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	GNT1	Q12096	491 aa		6.22	□□□□□ -1.41
SUB2	YDL084W	MAK21	Q12176	1025 aa	Known RBP	6.22	□□□□□ -1.41
SUB2	YDL084W	TOP2	P06786	1428 aa	Known RBP	6.21	□□□□□ -1.42
SUB2	YDL084W	MMS1	Q06211	1407 aa		6.21	□□□□□ -1.42
SUB2	YDL084W	NIP1	P32497	812 aa	Known RBP	6.21	□□□□□ -1.42
SUB2	YDL084W	CSE1	P33307	960 aa		6.21	□□□□□ -1.42
SUB2	YDL084W	STE13	P33894	931 aa		6.21	□□□□□ -1.42
SUB2	YDL084W	BAP2	P38084	609 aa		6.21	□□□□□ -1.42
SUB2	YDL084W	KAP123	P40069	1113 aa	Known RBP	6.21	□□□□□ -1.42
SUB2	YDL084W	SEC28	P40509	296 aa	Known RBP	6.21	□□□□□ -1.42
SUB2	YDL084W	URB2	P47108	1174 aa		6.21	□□□□□ -1.42
SUB2	YDL084W	YGR067C	P53243	804 aa		6.21	□□□□□ -1.42
SUB2	YDL084W	RET3	P53600	189 aa		6.21	□□□□□ -1.42
SUB2	YDL084W	YDR090C	Q03193	310 aa		6.21	□□□□□ -1.42
SUB2	YDL084W	TAF11	Q04226	346 aa		6.21	□□□□□ -1.42
SUB2	YDL084W	MLH2	Q07980	695 aa		6.21	□□□□□ -1.42
SUB2	YDL084W	RAD9	P14737	1309 aa		6.2	□□□□□ -1.42
SUB2	YDL084W	SSC1	P0CS90	654 aa	Known RBP	6.2	□□□□□ -1.42
SUB2	YDL084W	VMA2	P16140	517 aa	Known RBP	6.2	□□□□□ -1.42
SUB2	YDL084W	YAP1	P19880	650 aa	Known RBP	6.2	□□□□□ -1.42
SUB2	YDL084W	VAN1	P23642	535 aa		6.2	□□□□□ -1.42
SUB2	YDL084W	BMH1	P29311	267 aa	Known RBP	6.2	□□□□□ -1.42
SUB2	YDL084W	GLN1	P32288	370 aa	Known RBP	6.2	□□□□□ -1.42
SUB2	YDL084W	MRS6	P32864	603 aa	Known RBP	6.2	□□□□□ -1.42
SUB2	YDL084W	MRP4	P32902	394 aa		6.2	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms