RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C SLD5Q03406 294 aa8.32□□□□□ -1.08
RRP43YCR035C ADY4Q05955 493 aa8.32□□□□□ -1.08
RRP43YCR035C YLH47Q06493 454 aa8.32□□□□□ -1.08
RRP43YCR035C SMC6Q12749 1114 aa8.32□□□□□ -1.08
RRP43YCR035C TY1B-AO13527 1196 aaKnown RBP8.31□□□□□ -1.08
RRP43YCR035C PSE1P32337 1089 aaKnown RBP8.31□□□□□ -1.08
RRP43YCR035C PET10P36139 283 aa8.31□□□□□ -1.08
RRP43YCR035C CTR1P49573 406 aa8.31□□□□□ -1.08
RRP43YCR035C YGR125WP53273 1036 aa8.31□□□□□ -1.08
RRP43YCR035C CBK1P53894 756 aa8.31□□□□□ -1.08
RRP43YCR035C PTA1Q01329 785 aaPredicted RBP8.31□□□□□ -1.08
RRP43YCR035C DUS4Q06063 367 aa8.31□□□□□ -1.08
RRP43YCR035C WHI4Q07655 649 aaKnown RBP8.31□□□□□ -1.08
RRP43YCR035C ISA1Q07821 250 aaPredicted RBP8.31□□□□□ -1.08
RRP43YCR035C ERP3Q12403 225 aa8.31□□□□□ -1.08
RRP43YCR035C UBP11P36026 717 aa8.3□□□□□ -1.08
RRP43YCR035C REG2P38232 338 aa8.3□□□□□ -1.08
RRP43YCR035C RRM3P38766 723 aa8.3□□□□□ -1.08
RRP43YCR035C FYV10P40492 516 aa8.3□□□□□ -1.08
RRP43YCR035C THI6P41835 540 aa8.3□□□□□ -1.08
RRP43YCR035C TY3A-GQ12173 290 aa8.3□□□□□ -1.08
RRP43YCR035C TY3A-IQ99219 290 aa8.3□□□□□ -1.08
RRP43YCR035C FOB1O13329 566 aa8.29□□□□□ -1.08
RRP43YCR035C RPL22AP05749 121 aaKnown RBP8.29□□□□□ -1.08
RRP43YCR035C ESS1P22696 170 aa8.29□□□□□ -1.08
RRP43YCR035C GSY2P27472 705 aa8.29□□□□□ -1.08
RRP43YCR035C HIR1P32479 840 aa8.29□□□□□ -1.08
RRP43YCR035C PGM1P33401 570 aaKnown RBP8.29□□□□□ -1.08
RRP43YCR035C RKM3P38222 552 aa8.29□□□□□ -1.08
RRP43YCR035C NOC2P39744 710 aaKnown RBP8.29□□□□□ -1.08
RRP43YCR035C HUL5P53119 910 aa8.29□□□□□ -1.08
RRP43YCR035C YGL039WP53183 348 aaKnown RBP8.29□□□□□ -1.08
RRP43YCR035C DIP5P53388 608 aa8.29□□□□□ -1.08
RRP43YCR035C CNM67P53865 581 aaKnown RBP8.29□□□□□ -1.08
RRP43YCR035C LCD1Q04377 747 aa8.29□□□□□ -1.08
RRP43YCR035C SVF1Q05515 481 aa8.29□□□□□ -1.08
RRP43YCR035C SUP45P12385 437 aaKnown RBP8.28□□□□□ -1.08
RRP43YCR035C CKA2P19454 339 aa8.28□□□□□ -1.08
RRP43YCR035C TKL1P23254 680 aaKnown RBP8.28□□□□□ -1.08
RRP43YCR035C CLB5P30283 435 aa8.28□□□□□ -1.08
RRP43YCR035C GPD2P41911 440 aaKnown RBP8.28□□□□□ -1.08
RRP43YCR035C BRE2P43132 505 aa8.28□□□□□ -1.08
RRP43YCR035C VTC2P43585 828 aa8.28□□□□□ -1.08
RRP43YCR035C UBP15P50101 1230 aa8.28□□□□□ -1.08
RRP43YCR035C ATG1P53104 897 aa8.28□□□□□ -1.08
RRP43YCR035C DUS1P53759 423 aaKnown RBP8.28□□□□□ -1.08
RRP43YCR035C PGA2P53903 129 aa8.28□□□□□ -1.08
RRP43YCR035C SSL2Q00578 843 aa8.28□□□□□ -1.08
RRP43YCR035C PHM6Q05637 104 aa8.28□□□□□ -1.08
RRP43YCR035C YLR225CQ05948 407 aaKnown RBP8.28□□□□□ -1.08
RRP43YCR035C YEL076C-AP0CX16 216 aa8.27□□□□□ -1.09
RRP43YCR035C YLR464WP0CX17 216 aa8.27□□□□□ -1.09
RRP43YCR035C RPP1BP10622 106 aaKnown RBP8.27□□□□□ -1.09
RRP43YCR035C TAF13P11747 167 aa8.27□□□□□ -1.09
RRP43YCR035C CLN3P13365 580 aa8.27□□□□□ -1.09
RRP43YCR035C ATE1P16639 503 aa8.27□□□□□ -1.09
RRP43YCR035C ISY1P21374 235 aaPredicted RBP8.27□□□□□ -1.09
RRP43YCR035C SEC8P32855 1065 aa8.27□□□□□ -1.09
RRP43YCR035C SIP3P38717 1229 aa8.27□□□□□ -1.09
RRP43YCR035C PIH1P38768 344 aa8.27□□□□□ -1.09
RRP43YCR035C YEL076CP39971 216 aa8.27□□□□□ -1.09
RRP43YCR035C ULP2P40537 1034 aaPredicted RBP8.27□□□□□ -1.09
RRP43YCR035C ROG3P43602 733 aa8.27□□□□□ -1.09
RRP43YCR035C PML39Q03760 334 aa8.27□□□□□ -1.09
RRP43YCR035C CRD1Q07560 283 aa8.27□□□□□ -1.09
RRP43YCR035C TLG2Q08144 397 aa8.27□□□□□ -1.09
RRP43YCR035C MSC6Q08818 692 aaKnown RBP8.27□□□□□ -1.09
RRP43YCR035C AFT2Q08957 416 aa8.27□□□□□ -1.09
RRP43YCR035C YDR461C-AQ2V2P7 80 aa8.27□□□□□ -1.09
RRP43YCR035C TOM1Q03280 3268 aa8.27□□□□□ -1.09
RRP43YCR035C PGK1P00560 416 aaKnown RBP8.26□□□□□ -1.09
RRP43YCR035C MIP1P15801 1254 aa8.26□□□□□ -1.09
RRP43YCR035C GUP1P53154 560 aa8.26□□□□□ -1.09
RRP43YCR035C ZPR1P53303 486 aaKnown RBP8.26□□□□□ -1.09
RRP43YCR035C NCR1Q12200 1170 aa8.26□□□□□ -1.09
RRP43YCR035C SRD1P09007 221 aa8.25□□□□□ -1.09
RRP43YCR035C SUV3P32580 737 aa8.25□□□□□ -1.09
RRP43YCR035C TFC4P33339 1025 aa8.25□□□□□ -1.09
RRP43YCR035C DBP7P36120 742 aaKnown RBP8.25□□□□□ -1.09
RRP43YCR035C PPS1P38148 807 aa8.25□□□□□ -1.09
RRP43YCR035C RPN3P40016 523 aaKnown RBP8.25□□□□□ -1.09
RRP43YCR035C FUS2Q05670 677 aa8.25□□□□□ -1.09
RRP43YCR035C YDL129WQ07555 291 aa8.25□□□□□ -1.09
RRP43YCR035C SRF1Q12516 437 aa8.25□□□□□ -1.09
RRP43YCR035C PRE10P21242 288 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
RRP43YCR035C CDC48P25694 835 aaKnown RBP8.24□□□□□ -1.09
RRP43YCR035C RGT1P32862 1170 aa8.24□□□□□ -1.09
RRP43YCR035C NUP82P40368 713 aa8.24□□□□□ -1.09
RRP43YCR035C FIS1P40515 155 aa8.24□□□□□ -1.09
RRP43YCR035C TFG1P41895 735 aaPredicted RBP8.24□□□□□ -1.09
RRP43YCR035C YGR237CP50089 785 aa8.24□□□□□ -1.09
RRP43YCR035C YMR321CQ04898 105 aa8.24□□□□□ -1.09
RRP43YCR035C HCR1Q05775 265 aaKnown RBP8.24□□□□□ -1.09
RRP43YCR035C MET7Q08645 548 aa8.24□□□□□ -1.09
RRP43YCR035C PFK1P16861 987 aaKnown RBP8.23□□□□□ -1.09
RRP43YCR035C PRP22P24384 1145 aaKnown RBP8.23□□□□□ -1.09
RRP43YCR035C YUR1P26725 428 aa8.23□□□□□ -1.09
RRP43YCR035C PSO2P30620 661 aa8.23□□□□□ -1.09
RRP43YCR035C YKL091CP33324 310 aaKnown RBP8.23□□□□□ -1.09
RRP43YCR035C MIC60P36112 540 aa8.23□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms