RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	DED1	P06634	604 aa	Known RBP	6.51	□□□□□ -1.37
ATG12	YBR217W	PGI1	P12709	554 aa	Known RBP	6.51	□□□□□ -1.37
ATG12	YBR217W	PCT1	P13259	424 aa		6.51	□□□□□ -1.37
ATG12	YBR217W	ALG1	P16661	449 aa		6.51	□□□□□ -1.37
ATG12	YBR217W	MBR1	P23493	339 aa		6.51	□□□□□ -1.37
ATG12	YBR217W	IRE1	P32361	1115 aa		6.51	□□□□□ -1.37
ATG12	YBR217W	WHI3	P34761	661 aa	Known RBP	6.51	□□□□□ -1.37
ATG12	YBR217W	TGL3	P40308	642 aa		6.51	□□□□□ -1.37
ATG12	YBR217W	FIS1	P40515	155 aa		6.51	□□□□□ -1.37
ATG12	YBR217W	SGM1	P47166	707 aa		6.51	□□□□□ -1.37
ATG12	YBR217W	YGR153W	P48238	217 aa		6.51	□□□□□ -1.37
ATG12	YBR217W	PGA2	P53903	129 aa		6.51	□□□□□ -1.37
ATG12	YBR217W	YLH47	Q06493	454 aa		6.51	□□□□□ -1.37
ATG12	YBR217W	LDB19	Q12502	818 aa		6.51	□□□□□ -1.37
ATG12	YBR217W	SMC6	Q12749	1114 aa		6.51	□□□□□ -1.37
ATG12	YBR217W	HXK1	P04806	485 aa	Known RBP	6.5	□□□□□ -1.37
ATG12	YBR217W	FRS2	P15625	503 aa	Known RBP	6.5	□□□□□ -1.37
ATG12	YBR217W	RGP1	P16664	663 aa		6.5	□□□□□ -1.37
ATG12	YBR217W	UBC1	P21734	215 aa	Known RBP	6.5	□□□□□ -1.37
ATG12	YBR217W	POT1	P27796	417 aa	Known RBP RIP-Chip data	6.5	□□□□□ -1.37	not detected
ATG12	YBR217W	URA1	P28272	314 aa	Predicted RBP	6.5	□□□□□ -1.37
ATG12	YBR217W	RME1	P32338	300 aa	Known RBP	6.5	□□□□□ -1.37
ATG12	YBR217W	RIM101	P33400	625 aa		6.5	□□□□□ -1.37
ATG12	YBR217W	PET10	P36139	283 aa		6.5	□□□□□ -1.37
ATG12	YBR217W	TVP23	P38962	199 aa		6.5	□□□□□ -1.37
ATG12	YBR217W	PEX14	P53112	341 aa		6.5	□□□□□ -1.37
ATG12	YBR217W	MDR1	P53258	950 aa		6.5	□□□□□ -1.37
ATG12	YBR217W	YNL115C	P53925	644 aa		6.5	□□□□□ -1.37
ATG12	YBR217W	HRQ1	Q05549	1077 aa		6.5	□□□□□ -1.37
ATG12	YBR217W	TFC8	Q12308	588 aa		6.5	□□□□□ -1.37
ATG12	YBR217W	SRD1	P09007	221 aa		6.49	□□□□□ -1.37
ATG12	YBR217W	AFT1	P22149	690 aa		6.49	□□□□□ -1.37
ATG12	YBR217W	PRP22	P24384	1145 aa	Known RBP	6.49	□□□□□ -1.37
ATG12	YBR217W	SMY2	P32909	740 aa	Known RBP	6.49	□□□□□ -1.37
ATG12	YBR217W	GRS1	P38088	690 aa	Known RBP	6.49	□□□□□ -1.37
ATG12	YBR217W	PIH1	P38768	344 aa		6.49	□□□□□ -1.37
ATG12	YBR217W	ALD5	P40047	520 aa	Known RBP	6.49	□□□□□ -1.37
ATG12	YBR217W	ACF4	P47129	309 aa		6.49	□□□□□ -1.37
ATG12	YBR217W	UBA2	P52488	636 aa		6.49	□□□□□ -1.37
ATG12	YBR217W	RTC4	P53850	401 aa		6.49	□□□□□ -1.37
ATG12	YBR217W	CBK1	P53894	756 aa		6.49	□□□□□ -1.37
ATG12	YBR217W	YML020W	Q03722	664 aa		6.49	□□□□□ -1.37
ATG12	YBR217W	YEL076C-A	P0CX16	216 aa		6.48	□□□□□ -1.37
ATG12	YBR217W	YLR464W	P0CX17	216 aa		6.48	□□□□□ -1.37
ATG12	YBR217W	CAD1	P24813	409 aa	Known RBP	6.48	□□□□□ -1.37
ATG12	YBR217W	DID4	P36108	232 aa		6.48	□□□□□ -1.37
ATG12	YBR217W	YEL076C	P39971	216 aa		6.48	□□□□□ -1.37
ATG12	YBR217W	EAF5	P39995	279 aa		6.48	□□□□□ -1.37
ATG12	YBR217W	RPN3	P40016	523 aa	Known RBP	6.48	□□□□□ -1.37
ATG12	YBR217W	FUS2	Q05670	677 aa		6.48	□□□□□ -1.37
ATG12	YBR217W	COQ9	Q05779	260 aa		6.48	□□□□□ -1.37
ATG12	YBR217W	MMR1	Q06324	491 aa		6.48	□□□□□ -1.37
ATG12	YBR217W	RAM2	P29703	316 aa		6.47	□□□□□ -1.37
ATG12	YBR217W	MSS51	P32335	436 aa		6.47	□□□□□ -1.37
ATG12	YBR217W	SIP3	P38717	1229 aa		6.47	□□□□□ -1.37
ATG12	YBR217W	FYV10	P40492	516 aa		6.47	□□□□□ -1.37
ATG12	YBR217W	THI6	P41835	540 aa		6.47	□□□□□ -1.37
ATG12	YBR217W	DAK2	P43550	591 aa		6.47	□□□□□ -1.37
ATG12	YBR217W	ROG3	P43602	733 aa		6.47	□□□□□ -1.37
ATG12	YBR217W	FOL2	P51601	243 aa	Known RBP	6.47	□□□□□ -1.37
ATG12	YBR217W	FAR11	P53917	953 aa		6.47	□□□□□ -1.37
ATG12	YBR217W	ROD1	Q02805	837 aa		6.47	□□□□□ -1.37
ATG12	YBR217W	NOC3	Q07896	663 aa	Predicted RBP	6.47	□□□□□ -1.37
ATG12	YBR217W	PSR2	Q07949	397 aa		6.47	□□□□□ -1.37
ATG12	YBR217W	SMC5	Q08204	1093 aa		6.47	□□□□□ -1.37
ATG12	YBR217W	HIS4	P00815	799 aa	Known RBP	6.46	□□□□□ -1.38
ATG12	YBR217W	CKA2	P19454	339 aa		6.46	□□□□□ -1.38
ATG12	YBR217W	MCM3	P24279	971 aa	Known RBP	6.46	□□□□□ -1.38
ATG12	YBR217W	EFT1	P32324	842 aa	Known RBP	6.46	□□□□□ -1.38
ATG12	YBR217W	ATG19	P35193	415 aa		6.46	□□□□□ -1.38
ATG12	YBR217W	GUA1	P38625	525 aa	Known RBP	6.46	□□□□□ -1.38
ATG12	YBR217W	ERC1	P38767	581 aa		6.46	□□□□□ -1.38
ATG12	YBR217W	AVT1	P47082	602 aa		6.46	□□□□□ -1.38
ATG12	YBR217W	GUP1	P53154	560 aa		6.46	□□□□□ -1.38
ATG12	YBR217W	NCS2	P53923	493 aa	Predicted RBP	6.46	□□□□□ -1.38
ATG12	YBR217W	ARK1	P53974	638 aa		6.46	□□□□□ -1.38
ATG12	YBR217W	YVH1	Q02256	364 aa	Known RBP	6.46	□□□□□ -1.38
ATG12	YBR217W	CUS1	Q02554	436 aa	Predicted RBP	6.46	□□□□□ -1.38
ATG12	YBR217W	COG8	Q04632	607 aa		6.46	□□□□□ -1.38
ATG12	YBR217W	TCP1	P12612	559 aa	Known RBP	6.45	□□□□□ -1.38
ATG12	YBR217W	PFK1	P16861	987 aa	Known RBP	6.45	□□□□□ -1.38
ATG12	YBR217W	DBP5	P20449	482 aa	Known RBP	6.45	□□□□□ -1.38
ATG12	YBR217W	ISY1	P21374	235 aa	Predicted RBP	6.45	□□□□□ -1.38
ATG12	YBR217W	DRE2	P36152	348 aa		6.45	□□□□□ -1.38
ATG12	YBR217W	PGM2	P37012	569 aa	Known RBP	6.45	□□□□□ -1.38
ATG12	YBR217W	TPO2	P53283	614 aa		6.45	□□□□□ -1.38
ATG12	YBR217W	MUK1	Q02866	612 aa		6.45	□□□□□ -1.38
ATG12	YBR217W	EAR1	Q03212	550 aa		6.45	□□□□□ -1.38
ATG12	YBR217W	PEX19	Q07418	342 aa		6.45	□□□□□ -1.38
ATG12	YBR217W	AHC1	Q12433	566 aa		6.45	□□□□□ -1.38
ATG12	YBR217W	FOB1	O13329	566 aa		6.44	□□□□□ -1.38
ATG12	YBR217W	CDC15	P27636	974 aa		6.44	□□□□□ -1.38
ATG12	YBR217W	PPS1	P38148	807 aa		6.44	□□□□□ -1.38
ATG12	YBR217W	BRL1	P38770	471 aa		6.44	□□□□□ -1.38
ATG12	YBR217W	BDH2	P39713	417 aa		6.44	□□□□□ -1.38
ATG12	YBR217W	NUP82	P40368	713 aa		6.44	□□□□□ -1.38
ATG12	YBR217W	CUE3	P53137	624 aa	Known RBP	6.44	□□□□□ -1.38
ATG12	YBR217W	SWI6	P09959	803 aa		6.43	□□□□□ -1.38
ATG12	YBR217W	FUB1	P25659	250 aa		6.43	□□□□□ -1.38
ATG12	YBR217W	BMH1	P29311	267 aa	Known RBP	6.43	□□□□□ -1.38

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms