RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W SUB1P54000 292 aaKnown RBP4.38□□□□□ -1.71
PHO88YBR106W DOT1Q04089 582 aaKnown RBP4.38□□□□□ -1.71
PHO88YBR106W YPL066WQ12194 479 aa4.38□□□□□ -1.71
PHO88YBR106W RPL11BQ3E757 174 aaPredicted RBP4.38□□□□□ -1.71
PHO88YBR106W TY1B-DR4Q07793 1604 aa4.37□□□□□ -1.71
PHO88YBR106W RAD53P22216 821 aa4.37□□□□□ -1.71
PHO88YBR106W RPC82P32349 654 aa4.37□□□□□ -1.71
PHO88YBR106W REC104P33323 182 aa4.37□□□□□ -1.71
PHO88YBR106W YRO2P38079 344 aa4.37□□□□□ -1.71
PHO88YBR106W DSS1P39112 969 aa4.37□□□□□ -1.71
PHO88YBR106W ALG2P43636 503 aa4.37□□□□□ -1.71
PHO88YBR106W YGR237CP50089 785 aa4.37□□□□□ -1.71
PHO88YBR106W ZDS1P50111 915 aaKnown RBP4.37□□□□□ -1.71
PHO88YBR106W HFD1Q04458 532 aa4.37□□□□□ -1.71
PHO88YBR106W YLR257WQ06146 321 aaKnown RBP4.37□□□□□ -1.71
PHO88YBR106W ALG6Q12001 544 aaKnown RBP4.37□□□□□ -1.71
PHO88YBR106W COQ4O13525 335 aa4.36□□□□□ -1.71
PHO88YBR106W DPB3P27344 201 aa4.36□□□□□ -1.71
PHO88YBR106W SFA1P32771 386 aa4.36□□□□□ -1.71
PHO88YBR106W SAH1P39954 449 aaKnown RBP4.36□□□□□ -1.71
PHO88YBR106W RRT14P40470 206 aa4.36□□□□□ -1.71
PHO88YBR106W YIR007WP40566 764 aa4.36□□□□□ -1.71
PHO88YBR106W YJR008WP47085 338 aa4.36□□□□□ -1.71
PHO88YBR106W VMS1Q04311 632 aaKnown RBP4.36□□□□□ -1.71
PHO88YBR106W YOR059CQ08448 450 aaKnown RBP4.36□□□□□ -1.71
PHO88YBR106W YER152CP10356 443 aa4.35□□□□□ -1.71
PHO88YBR106W RSC6P25632 483 aa4.35□□□□□ -1.71
PHO88YBR106W CCZ1P38273 704 aa4.35□□□□□ -1.71
PHO88YBR106W TPM2P40414 161 aa4.35□□□□□ -1.71
PHO88YBR106W KIP3P53086 805 aaKnown RBP4.35□□□□□ -1.71
PHO88YBR106W SDA1P53313 767 aaKnown RBP4.35□□□□□ -1.71
PHO88YBR106W UME1Q03010 460 aa4.35□□□□□ -1.71
PHO88YBR106W YDR514CQ04408 483 aa4.35□□□□□ -1.71
PHO88YBR106W ATG13Q06628 738 aa4.35□□□□□ -1.71
PHO88YBR106W THI73Q07904 523 aa4.35□□□□□ -1.71
PHO88YBR106W NBA1Q08229 501 aaKnown RBP4.35□□□□□ -1.71
PHO88YBR106W YPR071WQ12346 211 aa4.35□□□□□ -1.71
PHO88YBR106W PHR1P05066 565 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
PHO88YBR106W ERS1P17261 260 aa4.34□□□□□ -1.71
PHO88YBR106W SRO9P25567 434 aaKnown RBP4.34□□□□□ -1.71
PHO88YBR106W PRO1P32264 428 aa4.34□□□□□ -1.71
PHO88YBR106W CDC12P32468 407 aaKnown RBP4.34□□□□□ -1.71
PHO88YBR106W STO1P34160 861 aaKnown RBP4.34□□□□□ -1.71
PHO88YBR106W YBR284WP38150 797 aa4.34□□□□□ -1.71
PHO88YBR106W PIK1P39104 1066 aa4.34□□□□□ -1.71
PHO88YBR106W JJJ3P47138 172 aa4.34□□□□□ -1.71
PHO88YBR106W CAF120P53836 1060 aa4.34□□□□□ -1.71
PHO88YBR106W ATP25Q03153 612 aa4.34□□□□□ -1.71
PHO88YBR106W REH1Q06709 432 aa4.34□□□□□ -1.71
PHO88YBR106W YDL176WQ12027 708 aa4.34□□□□□ -1.71
PHO88YBR106W FAP7Q12055 197 aaPredicted RBP4.34□□□□□ -1.71
PHO88YBR106W NUP145P49687 1317 aa4.34□□□□□ -1.71
PHO88YBR106W MSD1P15179 658 aaKnown RBP4.33□□□□□ -1.72
PHO88YBR106W YSC84P32793 468 aa4.33□□□□□ -1.72
PHO88YBR106W SPC29P33419 253 aa4.33□□□□□ -1.72
PHO88YBR106W CAF16P43569 289 aa4.33□□□□□ -1.72
PHO88YBR106W GYP7P48365 746 aa4.33□□□□□ -1.72
PHO88YBR106W MAL11P53048 616 aa4.33□□□□□ -1.72
PHO88YBR106W NCE103P53615 221 aa4.33□□□□□ -1.72
PHO88YBR106W NSI1Q12457 570 aa4.33□□□□□ -1.72
PHO88YBR106W TMA7Q3E764 64 aaKnown RBP4.33□□□□□ -1.72
PHO88YBR106W TCB3Q03640 1545 aaKnown RBP4.32□□□□□ -1.72
PHO88YBR106W VBA3P25594 458 aa4.32□□□□□ -1.72
PHO88YBR106W CDC48P25694 835 aaKnown RBP4.32□□□□□ -1.72
PHO88YBR106W MDL2P33311 773 aa4.32□□□□□ -1.72
PHO88YBR106W EMC3P36039 253 aa4.32□□□□□ -1.72
PHO88YBR106W UGA2P38067 497 aa4.32□□□□□ -1.72
PHO88YBR106W BAP2P38084 609 aa4.32□□□□□ -1.72
PHO88YBR106W RRM3P38766 723 aa4.32□□□□□ -1.72
PHO88YBR106W RPN10P38886 268 aaKnown RBP4.32□□□□□ -1.72
PHO88YBR106W NAB3P38996 802 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
PHO88YBR106W MGS1P40151 587 aa4.32□□□□□ -1.72
PHO88YBR106W ALT1P52893 592 aa4.32□□□□□ -1.72
PHO88YBR106W VPS30Q02948 557 aa4.32□□□□□ -1.72
PHO88YBR106W CEF1Q03654 590 aaPredicted RBP4.32□□□□□ -1.72
PHO88YBR106W TPP1Q03796 238 aa4.32□□□□□ -1.72
PHO88YBR106W RSB1Q08417 382 aa4.32□□□□□ -1.72
PHO88YBR106W PUS7Q08647 676 aaKnown RBP4.32□□□□□ -1.72
PHO88YBR106W AI1P03875 834 aa4.31□□□□□ -1.72
PHO88YBR106W ATP4P05626 244 aa4.31□□□□□ -1.72
PHO88YBR106W RPS4AP0CX35 261 aaKnown RBP4.31□□□□□ -1.72
PHO88YBR106W RPS4BP0CX36 261 aaKnown RBP4.31□□□□□ -1.72
PHO88YBR106W TOP3P13099 656 aa4.31□□□□□ -1.72
PHO88YBR106W SLA2P33338 968 aa4.31□□□□□ -1.72
PHO88YBR106W MTC2P34246 357 aa4.31□□□□□ -1.72
PHO88YBR106W GPT2P36148 743 aa4.31□□□□□ -1.72
PHO88YBR106W TYS1P36421 394 aaKnown RBP4.31□□□□□ -1.72
PHO88YBR106W MXR1P40029 184 aa4.31□□□□□ -1.72
PHO88YBR106W ATG36P46983 293 aa4.31□□□□□ -1.72
PHO88YBR106W ENV11P53246 860 aa4.31□□□□□ -1.72
PHO88YBR106W YGR283CP53336 341 aaPredicted RBP4.31□□□□□ -1.72
PHO88YBR106W FOL1P53848 824 aa4.31□□□□□ -1.72
PHO88YBR106W TY1A-NL1Q12391 440 aaKnown RBP4.31□□□□□ -1.72
PHO88YBR106W SPA2P23201 1466 aaKnown RBP4.3□□□□□ -1.72
PHO88YBR106W SRD1P09007 221 aa4.3□□□□□ -1.72
PHO88YBR106W MPH2P0CD99 609 aa4.3□□□□□ -1.72
PHO88YBR106W DBP2P24783 546 aaKnown RBP4.3□□□□□ -1.72
PHO88YBR106W FUN30P31380 1131 aa4.3□□□□□ -1.72
PHO88YBR106W YBR238CP38330 731 aaKnown RBP4.3□□□□□ -1.72
PHO88YBR106W BOI2P39969 1040 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms