RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C CHS2P14180 963 aa1.95□□□□□ -2.1
YAR009CYAR009C MSH4P40965 878 aaPredicted RBP1.95□□□□□ -2.1
YAR009CYAR009C RKM2Q03942 479 aa1.95□□□□□ -2.1
YAR009CYAR009C TMA46Q12000 345 aaKnown RBP1.95□□□□□ -2.1
YAR009CYAR009C NFS1P25374 497 aa1.94□□□□□ -2.1
YAR009CYAR009C SMY2P32909 740 aaKnown RBP1.94□□□□□ -2.1
YAR009CYAR009C KAE1P36132 386 aa1.94□□□□□ -2.1
YAR009CYAR009C ENT3P47160 408 aa1.94□□□□□ -2.1
YAR009CYAR009C SIW14P53965 281 aa1.94□□□□□ -2.1
YAR009CYAR009C PUF3Q07807 879 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
YAR009CYAR009C SPT7P35177 1332 aa1.94□□□□□ -2.1
YAR009CYAR009C SBP1P10080 294 aaKnown RBP1.94□□□□□ -2.1
YAR009CYAR009C RET1P22276 1149 aaKnown RBP1.94□□□□□ -2.1
YAR009CYAR009C PGM1P33401 570 aaKnown RBP1.94□□□□□ -2.1
YAR009CYAR009C MMM1P41800 426 aa1.94□□□□□ -2.1
YAR009CYAR009C YNR029CP53729 429 aaKnown RBP1.94□□□□□ -2.1
YAR009CYAR009C RPS4AP0CX35 261 aaKnown RBP1.94□□□□□ -2.1
YAR009CYAR009C RPS4BP0CX36 261 aaKnown RBP1.94□□□□□ -2.1
YAR009CYAR009C CDC34P14682 295 aa1.94□□□□□ -2.1
YAR009CYAR009C YEF3P16521 1044 aaKnown RBP1.94□□□□□ -2.1
YAR009CYAR009C VPS53P47061 822 aa1.94□□□□□ -2.1
YAR009CYAR009C CWC24P53769 259 aa1.94□□□□□ -2.1
YAR009CYAR009C ROD1Q02805 837 aa1.94□□□□□ -2.1
YAR009CYAR009C YOR059CQ08448 450 aaKnown RBP1.94□□□□□ -2.1
YAR009CYAR009C YLL067CQ07888 1374 aa1.93□□□□□ -2.1
YAR009CYAR009C ALT1P52893 592 aa1.93□□□□□ -2.1
YAR009CYAR009C PIN2Q12057 282 aa1.93□□□□□ -2.1
YAR009CYAR009C YLR122CQ12312 125 aa1.93□□□□□ -2.1
YAR009CYAR009C PTC5Q12511 572 aa1.93□□□□□ -2.1
YAR009CYAR009C MSB1P21339 1137 aaKnown RBP1.93□□□□□ -2.1
YAR009CYAR009C MKK2P32491 506 aa1.93□□□□□ -2.1
YAR009CYAR009C QNS1P38795 714 aaKnown RBP1.93□□□□□ -2.1
YAR009CYAR009C CIT3P43635 486 aa1.93□□□□□ -2.1
YAR009CYAR009C GNP1P48813 663 aa1.93□□□□□ -2.1
YAR009CYAR009C VPS16Q03308 798 aa1.93□□□□□ -2.1
YAR009CYAR009C RSA3Q05942 220 aaKnown RBP1.93□□□□□ -2.1
YAR009CYAR009C YLR257WQ06146 321 aaKnown RBP1.93□□□□□ -2.1
YAR009CYAR009C HRK1Q08732 759 aaKnown RBP1.93□□□□□ -2.1
YAR009CYAR009C NSI1Q12457 570 aa1.93□□□□□ -2.1
YAR009CYAR009C SYP1P25623 870 aaKnown RBP1.93□□□□□ -2.1
YAR009CYAR009C WHI3P34761 661 aaKnown RBP1.93□□□□□ -2.1
YAR009CYAR009C ALG3P38179 458 aa1.93□□□□□ -2.1
YAR009CYAR009C HXT13P39924 564 aa1.93□□□□□ -2.1
YAR009CYAR009C YGR130CP53278 816 aa1.93□□□□□ -2.1
YAR009CYAR009C HXT17P53631 564 aa1.93□□□□□ -2.1
YAR009CYAR009C HXT15P54854 567 aa1.93□□□□□ -2.1
YAR009CYAR009C RAT1Q02792 1006 aaKnown RBP1.93□□□□□ -2.1
YAR009CYAR009C GDE1Q02979 1223 aa1.93□□□□□ -2.1
YAR009CYAR009C TPP1Q03796 238 aa1.93□□□□□ -2.1
YAR009CYAR009C RER2P35196 286 aa1.92□□□□□ -2.1
YAR009CYAR009C VAC8P39968 578 aa1.92□□□□□ -2.1
YAR009CYAR009C RCM1P53972 490 aa1.92□□□□□ -2.1
YAR009CYAR009C IOC4Q04213 475 aa1.92□□□□□ -2.1
YAR009CYAR009C AFG2P32794 780 aa1.92□□□□□ -2.1
YAR009CYAR009C DUT1P33317 147 aa1.92□□□□□ -2.1
YAR009CYAR009C NMD3P38861 518 aaKnown RBP1.92□□□□□ -2.1
YAR009CYAR009C TYW3P53177 273 aa1.92□□□□□ -2.1
YAR009CYAR009C PUS7Q08647 676 aaKnown RBP1.92□□□□□ -2.1
YAR009CYAR009C CYC7P00045 113 aa1.92□□□□□ -2.1
YAR009CYAR009C CNN1P43618 361 aa1.92□□□□□ -2.1
YAR009CYAR009C FAA4P47912 694 aaKnown RBP1.92□□□□□ -2.1
YAR009CYAR009C YGR053CP53234 283 aa1.92□□□□□ -2.1
YAR009CYAR009C ALD6P54115 500 aaKnown RBP1.92□□□□□ -2.1
YAR009CYAR009C SPO20Q04359 397 aa1.92□□□□□ -2.1
YAR009CYAR009C MAG2Q06436 670 aaKnown RBP1.92□□□□□ -2.1
YAR009CYAR009C MED7Q08278 222 aa1.92□□□□□ -2.1
YAR009CYAR009C TRP2P00899 507 aaKnown RBP1.91□□□□□ -2.1
YAR009CYAR009C KIP1P28742 1111 aa1.91□□□□□ -2.1
YAR009CYAR009C LYP1P32487 611 aa1.91□□□□□ -2.1
YAR009CYAR009C KRI1P42846 591 aaKnown RBP1.91□□□□□ -2.1
YAR009CYAR009C CTH1P47976 325 aa1.91□□□□□ -2.1
YAR009CYAR009C YPL260WQ08977 551 aa1.91□□□□□ -2.1
YAR009CYAR009C YVC1Q12324 675 aa1.91□□□□□ -2.1
YAR009CYAR009C TRP3P00937 484 aa1.91□□□□□ -2.1
YAR009CYAR009C DBP5P20449 482 aaKnown RBP1.91□□□□□ -2.1
YAR009CYAR009C MLS1P30952 554 aa1.91□□□□□ -2.1
YAR009CYAR009C MCM7P38132 845 aa1.91□□□□□ -2.1
YAR009CYAR009C RGD1P38339 666 aa1.91□□□□□ -2.1
YAR009CYAR009C YJL045WP47052 634 aa1.91□□□□□ -2.1
YAR009CYAR009C ALO1P54783 526 aaKnown RBP1.91□□□□□ -2.1
YAR009CYAR009C EEB1Q02891 456 aa1.91□□□□□ -2.1
YAR009CYAR009C NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
YAR009CYAR009C TIF35Q04067 274 aaKnown RBP1.91□□□□□ -2.1
YAR009CYAR009C GLT1Q12680 2145 aaKnown RBP1.91□□□□□ -2.1
YAR009CYAR009C SNF7P39929 240 aaKnown RBP1.9□□□□□ -2.1
YAR009CYAR009C TRE1Q08919 783 aa1.9□□□□□ -2.1
YAR009CYAR009C FAL1Q12099 399 aaKnown RBP1.9□□□□□ -2.1
YAR009CYAR009C SPO21Q12411 609 aa1.9□□□□□ -2.1
YAR009CYAR009C YHL012WP38709 493 aa1.9□□□□□ -2.11
YAR009CYAR009C GPB2P39717 880 aa1.9□□□□□ -2.11
YAR009CYAR009C OYE3P41816 400 aaPredicted RBP1.9□□□□□ -2.11
YAR009CYAR009C HNT2P49775 206 aa1.9□□□□□ -2.11
YAR009CYAR009C HOS3Q02959 697 aaKnown RBP1.9□□□□□ -2.11
YAR009CYAR009C AOS1Q06624 347 aa1.9□□□□□ -2.11
YAR009CYAR009C WRS1Q12109 432 aaKnown RBP1.9□□□□□ -2.11
YAR009CYAR009C INO1P11986 533 aa1.9□□□□□ -2.11
YAR009CYAR009C BAS1P22035 811 aa1.9□□□□□ -2.11
YAR009CYAR009C YSC84P32793 468 aa1.9□□□□□ -2.11
YAR009CYAR009C OMA1P36163 345 aa1.9□□□□□ -2.11
YAR009CYAR009C TOS1P38288 455 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms