RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W DOP1Q03921 1698 aa2.52□□□□□ -2.01
VPS8YAL002W BUD3P25558 1636 aa2.52□□□□□ -2.01
VPS8YAL002W RFA1P22336 621 aaKnown RBP2.52□□□□□ -2.01
VPS8YAL002W MEF1P25039 761 aa2.52□□□□□ -2.01
VPS8YAL002W HIR1P32479 840 aa2.52□□□□□ -2.01
VPS8YAL002W AIM21P40563 679 aa2.52□□□□□ -2.01
VPS8YAL002W UTP8P53276 713 aaKnown RBP2.52□□□□□ -2.01
VPS8YAL002W HFD1Q04458 532 aa2.52□□□□□ -2.01
VPS8YAL002W OPT2Q06593 877 aa2.52□□□□□ -2.01
VPS8YAL002W GUD1Q07729 489 aa2.52□□□□□ -2.01
VPS8YAL002W SLX4Q12098 748 aa2.52□□□□□ -2.01
VPS8YAL002W MRP10O75012 95 aa2.51□□□□□ -2.01
VPS8YAL002W MRS6P32864 603 aaKnown RBP2.51□□□□□ -2.01
VPS8YAL002W ENP1P38333 483 aaKnown RBP2.51□□□□□ -2.01
VPS8YAL002W NEM1P38757 446 aa2.51□□□□□ -2.01
VPS8YAL002W CEM1P39525 442 aa2.51□□□□□ -2.01
VPS8YAL002W INP51P40559 946 aaKnown RBP2.51□□□□□ -2.01
VPS8YAL002W ALG2P43636 503 aa2.51□□□□□ -2.01
VPS8YAL002W SHE9Q04172 456 aa2.51□□□□□ -2.01
VPS8YAL002W UTP5Q04177 643 aaKnown RBP2.51□□□□□ -2.01
VPS8YAL002W NTE1Q04958 1679 aa2.51□□□□□ -2.01
VPS8YAL002W PRP5P21372 849 aaPredicted RBP2.51□□□□□ -2.01
VPS8YAL002W RPA135P22138 1203 aaKnown RBP2.51□□□□□ -2.01
VPS8YAL002W SLA1P32790 1244 aa2.51□□□□□ -2.01
VPS8YAL002W MXR1P40029 184 aa2.51□□□□□ -2.01
VPS8YAL002W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
VPS8YAL002W MSH6Q03834 1242 aa2.51□□□□□ -2.01
VPS8YAL002W DNF2Q12675 1612 aa2.51□□□□□ -2.01
VPS8YAL002W HCA4P20448 770 aaKnown RBP2.51□□□□□ -2.01
VPS8YAL002W VMA4P22203 233 aaKnown RBP2.51□□□□□ -2.01
VPS8YAL002W PEA2P40091 420 aa2.51□□□□□ -2.01
VPS8YAL002W PFD1P46988 109 aa2.51□□□□□ -2.01
VPS8YAL002W ALY2P47029 1046 aa2.51□□□□□ -2.01
VPS8YAL002W GCR2Q01722 534 aa2.51□□□□□ -2.01
VPS8YAL002W SRP1Q02821 542 aaKnown RBP2.51□□□□□ -2.01
VPS8YAL002W HIM1Q06674 414 aa2.51□□□□□ -2.01
VPS8YAL002W BRE1Q07457 700 aaKnown RBP2.51□□□□□ -2.01
VPS8YAL002W RPP1AP05318 106 aaPredicted RBP2.5□□□□□ -2.01
VPS8YAL002W ERP2P39704 215 aa2.5□□□□□ -2.01
VPS8YAL002W BOI2P39969 1040 aa2.5□□□□□ -2.01
VPS8YAL002W NIT3P49954 291 aa2.5□□□□□ -2.01
VPS8YAL002W AIM14P53109 570 aa2.5□□□□□ -2.01
VPS8YAL002W RSB1Q08417 382 aa2.5□□□□□ -2.01
VPS8YAL002W SNT2P53127 1403 aa2.5□□□□□ -2.01
VPS8YAL002W SPO14P36126 1683 aa2.5□□□□□ -2.01
VPS8YAL002W GEA2P39993 1459 aaKnown RBP2.5□□□□□ -2.01
VPS8YAL002W DPS1P04802 557 aaKnown RBP2.5□□□□□ -2.01
VPS8YAL002W DBP5P20449 482 aaKnown RBP2.5□□□□□ -2.01
VPS8YAL002W FUI1P38196 639 aa2.5□□□□□ -2.01
VPS8YAL002W ALG14P38242 237 aa2.5□□□□□ -2.01
VPS8YAL002W EXO5P38289 585 aa2.5□□□□□ -2.01
VPS8YAL002W TAT2P38967 592 aa2.5□□□□□ -2.01
VPS8YAL002W TY4A-JP47023 414 aa2.5□□□□□ -2.01
VPS8YAL002W YNR065CP53751 1116 aa2.5□□□□□ -2.01
VPS8YAL002W CEF1Q03654 590 aaPredicted RBP2.5□□□□□ -2.01
VPS8YAL002W TMA64Q04600 565 aaKnown RBP2.5□□□□□ -2.01
VPS8YAL002W YDL121CQ07541 149 aa2.5□□□□□ -2.01
VPS8YAL002W TY2B-BQ12491 1770 aa2.5□□□□□ -2.01
VPS8YAL002W CDC9P04819 755 aa2.5□□□□□ -2.01
VPS8YAL002W HTS1P07263 546 aaKnown RBP2.5□□□□□ -2.01
VPS8YAL002W TOA1P32773 286 aa2.5□□□□□ -2.01
VPS8YAL002W TFA2P36145 328 aa2.5□□□□□ -2.01
VPS8YAL002W YFL052WP43551 465 aa2.5□□□□□ -2.01
VPS8YAL002W PUS2P53167 370 aa2.5□□□□□ -2.01
VPS8YAL002W UGO1Q03327 502 aa2.5□□□□□ -2.01
VPS8YAL002W ENT2Q05785 613 aa2.5□□□□□ -2.01
VPS8YAL002W YPL066WQ12194 479 aa2.5□□□□□ -2.01
VPS8YAL002W PDR12Q02785 1511 aa2.49□□□□□ -2.01
VPS8YAL002W GAR1P28007 205 aaKnown RBP2.49□□□□□ -2.01
VPS8YAL002W RPN10P38886 268 aaKnown RBP2.49□□□□□ -2.01
VPS8YAL002W CEP3P40969 608 aa2.49□□□□□ -2.01
VPS8YAL002W YGR153WP48238 217 aa2.49□□□□□ -2.01
VPS8YAL002W HAS1Q03532 505 aaKnown RBP2.49□□□□□ -2.01
VPS8YAL002W YHM2Q04013 314 aa2.49□□□□□ -2.01
VPS8YAL002W SCC2Q04002 1493 aa2.49□□□□□ -2.01
VPS8YAL002W SKI3P17883 1432 aaKnown RBP2.49□□□□□ -2.01
VPS8YAL002W MMS1Q06211 1407 aa2.49□□□□□ -2.01
VPS8YAL002W SAC7P17121 654 aa2.49□□□□□ -2.01
VPS8YAL002W DAL1P32375 460 aa2.49□□□□□ -2.01
VPS8YAL002W TDA3P38758 523 aa2.49□□□□□ -2.01
VPS8YAL002W UBC9P50623 157 aaPredicted RBP2.49□□□□□ -2.01
VPS8YAL002W TPP1Q03796 238 aa2.49□□□□□ -2.01
VPS8YAL002W ATG16Q03818 150 aa2.49□□□□□ -2.01
VPS8YAL002W YDR514CQ04408 483 aa2.49□□□□□ -2.01
VPS8YAL002W TY1B-DR3Q99231 1755 aa2.49□□□□□ -2.01
VPS8YAL002W PRK1P40494 810 aa2.49□□□□□ -2.01
VPS8YAL002W KIP3P53086 805 aaKnown RBP2.49□□□□□ -2.01
VPS8YAL002W MLP2P40457 1679 aa2.48□□□□□ -2.01
VPS8YAL002W CDC19P00549 500 aaKnown RBP2.48□□□□□ -2.01
VPS8YAL002W THS1P04801 734 aaKnown RBP2.48□□□□□ -2.01
VPS8YAL002W MRC1P25588 1096 aa2.48□□□□□ -2.01
VPS8YAL002W PWP2P25635 923 aaKnown RBP2.48□□□□□ -2.01
VPS8YAL002W PRO1P32264 428 aa2.48□□□□□ -2.01
VPS8YAL002W MFT1P33441 392 aaKnown RBP2.48□□□□□ -2.01
VPS8YAL002W GIP2P40036 548 aa2.48□□□□□ -2.01
VPS8YAL002W UBP6P43593 499 aaKnown RBP2.48□□□□□ -2.01
VPS8YAL002W NKP1Q12493 238 aa2.48□□□□□ -2.01
VPS8YAL002W PFK1P16861 987 aaKnown RBP2.48□□□□□ -2.01
VPS8YAL002W SFL1P20134 766 aa2.48□□□□□ -2.01
VPS8YAL002W RET1P22276 1149 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms