RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-223ENST00000564343 PRKCSHP14314 528 aaPredicted RBP8.44□□□□□ -1.06
TCF4-223ENST00000564343 HNRNPMP52272 730 aaKnown RBP eCLIP8.44□□□□□ -1.067e-6■■■□□ 17
TCF4-223ENST00000564343 RELBQ01201 579 aa8.44□□□□□ -1.06
TCF4-223ENST00000564343 CCDC125Q86Z20 511 aa8.44□□□□□ -1.06
TCF4-223ENST00000564343 GJD4Q96KN9 370 aaPredicted RBP8.44□□□□□ -1.06
TCF4-223ENST00000564343 TMPRSS4Q9NRS4 437 aa8.44□□□□□ -1.06
TCF4-223ENST00000564343 ZNF777Q9ULD5 760 aaPredicted RBP8.44□□□□□ -1.06
TCF4-223ENST00000564343 ATP7AQ04656 1500 aa8.44□□□□□ -1.06
TCF4-223ENST00000564343 GPATCH8Q9UKJ3 1502 aaKnown RBP8.44□□□□□ -1.06
TCF4-223ENST00000564343 PLXNC1O60486 1568 aa8.44□□□□□ -1.06
TCF4-223ENST00000564343 INO80Q9ULG1 1556 aaPredicted RBP8.44□□□□□ -1.06
TCF4-223ENST00000564343 ERVH48-1M5A8F1 160 aa8.43□□□□□ -1.06
TCF4-223ENST00000564343 MCCD1P59942 119 aaPredicted RBP8.43□□□□□ -1.06
TCF4-223ENST00000564343 PTSQ03393 145 aa8.43□□□□□ -1.06
TCF4-223ENST00000564343 TPRNQ4KMQ1 711 aa8.43□□□□□ -1.06
TCF4-223ENST00000564343 ZNF784Q8NCA9 323 aaPredicted RBP8.43□□□□□ -1.06
TCF4-223ENST00000564343 AGBL1Q96MI9 1066 aa8.43□□□□□ -1.06
TCF4-223ENST00000564343 PCDHB9Q9Y5E1 797 aa8.43□□□□□ -1.06
TCF4-223ENST00000564343 FYCO1Q9BQS8 1478 aa8.43□□□□□ -1.06
TCF4-223ENST00000564343 CEP170BQ9Y4F5 1589 aaPredicted RBP8.43□□□□□ -1.06
TCF4-223ENST00000564343 ADH1AP07327 375 aa8.42□□□□□ -1.06
TCF4-223ENST00000564343 ZNF330Q9Y3S2 320 aaPredicted RBP8.42□□□□□ -1.06
TCF4-223ENST00000564343 SPAG9O60271 1321 aaKnown RBP8.42□□□□□ -1.06
TCF4-223ENST00000564343 ZNF335Q9H4Z2 1342 aaPredicted RBP8.42□□□□□ -1.06
TCF4-223ENST00000564343 ADGBQ8N7X0 1667 aa8.41□□□□□ -1.06
TCF4-223ENST00000564343 GSK3AP49840 483 aa8.41□□□□□ -1.06
TCF4-223ENST00000564343 POLMQ9NP87 494 aaPredicted RBP8.41□□□□□ -1.06
TCF4-223ENST00000564343 A2MP01023 1474 aa8.4□□□□□ -1.06
TCF4-223ENST00000564343 PLA2R1Q13018 1463 aa8.4□□□□□ -1.06
TCF4-223ENST00000564343 TCOF1Q13428 1488 aaKnown RBP8.4□□□□□ -1.06
TCF4-223ENST00000564343 PTPRKQ15262 1439 aa8.4□□□□□ -1.06
TCF4-223ENST00000564343 LILRA1O75019 489 aa8.4□□□□□ -1.06
TCF4-223ENST00000564343 FBXO45P0C2W1 286 aa8.4□□□□□ -1.06
TCF4-223ENST00000564343 RNF20Q5VTR2 975 aa8.4□□□□□ -1.06
TCF4-223ENST00000564343 KCTD17Q8N5Z5 321 aa8.4□□□□□ -1.06
TCF4-223ENST00000564343 INSM2Q96T92 566 aaPredicted RBP8.4□□□□□ -1.06
TCF4-223ENST00000564343 DNMT1P26358 1616 aaKnown RBP8.4□□□□□ -1.07
TCF4-223ENST00000564343 KIAA1107Q9UPP5 1409 aa8.39□□□□□ -1.07
TCF4-223ENST00000564343 PTGIRP43119 386 aa8.39□□□□□ -1.07
TCF4-223ENST00000564343 CTSOP43234 321 aaPredicted RBP8.39□□□□□ -1.07
TCF4-223ENST00000564343 NR1H3Q13133 447 aa8.39□□□□□ -1.07
TCF4-223ENST00000564343 GGT6Q6P531 493 aa8.39□□□□□ -1.07
TCF4-223ENST00000564343 VWA5B2Q8N398 1253 aa8.39□□□□□ -1.07
TCF4-223ENST00000564343 COL25A1Q9BXS0 654 aaPredicted RBP8.39□□□□□ -1.07
TCF4-223ENST00000564343 ZNF395Q9H8N7 513 aaPredicted RBP8.39□□□□□ -1.07
TCF4-223ENST00000564343 NDUFB9Q9Y6M9 179 aa8.39□□□□□ -1.07
TCF4-223ENST00000564343 POLR1AO95602 1720 aaPredicted RBP8.39□□□□□ -1.07
TCF4-223ENST00000564343 ZNF644Q9H582 1327 aaPredicted RBP8.38□□□□□ -1.07
TCF4-223ENST00000564343 UBAP1LF5GYI3 381 aa8.38□□□□□ -1.07
TCF4-223ENST00000564343 GIGYF1O75420 1035 aaPredicted RBP8.38□□□□□ -1.07
TCF4-223ENST00000564343 RNFT1Q5M7Z0 435 aa8.38□□□□□ -1.07
TCF4-223ENST00000564343 CCDC155Q8N6L0 562 aa8.38□□□□□ -1.07
TCF4-223ENST00000564343 CYLDQ9NQC7 956 aa8.38□□□□□ -1.07
TCF4-223ENST00000564343 CFDP1Q9UEE9 299 aaPredicted RBP8.38□□□□□ -1.07
TCF4-223ENST00000564343 PLEKHH2Q8IVE3 1493 aa8.38□□□□□ -1.07
TCF4-223ENST00000564343 TIAM1Q13009 1591 aa8.37□□□□□ -1.07
TCF4-223ENST00000564343 SLC35F4A4IF30 521 aa8.37□□□□□ -1.07
TCF4-223ENST00000564343 ADD1P35611 737 aaKnown RBP8.37□□□□□ -1.07
TCF4-223ENST00000564343 RNF217Q8TC41 542 aa8.37□□□□□ -1.07
TCF4-223ENST00000564343 WHAMMQ8TF30 809 aa8.37□□□□□ -1.07
TCF4-223ENST00000564343 ADAMTS8Q9UP79 889 aa8.37□□□□□ -1.07
TCF4-223ENST00000564343 CCNB3Q8WWL7 1395 aa8.36□□□□□ -1.07
TCF4-223ENST00000564343 NEURL4Q96JN8 1562 aa8.36□□□□□ -1.07
TCF4-223ENST00000564343 KCNMA1Q12791 1236 aa8.36□□□□□ -1.07
TCF4-223ENST00000564343 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
TCF4-223ENST00000564343 PRM3Q9NNZ6 103 aa8.36□□□□□ -1.07
TCF4-223ENST00000564343 A2ML1A8K2U0 1454 aa8.36□□□□□ -1.07
TCF4-223ENST00000564343 MBD5Q9P267 1494 aa8.36□□□□□ -1.07
TCF4-223ENST00000564343 MTMR14Q8NCE2 650 aa8.35□□□□□ -1.07
TCF4-223ENST00000564343 MTUS2Q5JR59 1369 aa8.35□□□□□ -1.07
TCF4-223ENST00000564343 ATP5J2-PTCD1G3V325 749 aa8.34□□□□□ -1.07
TCF4-223ENST00000564343 CC2D2BQ6DHV5 1058 aa8.34□□□□□ -1.07
TCF4-223ENST00000564343 KDF1Q8NAX2 398 aaPredicted RBP8.34□□□□□ -1.07
TCF4-223ENST00000564343 STRCP1A6NGW2 1772 aa8.33□□□□□ -1.08
TCF4-223ENST00000564343 CFAP65Q6ZU64 1925 aaKnown RBP8.33□□□□□ -1.08
TCF4-223ENST00000564343 LOC100996750A0A140TA64 210 aa8.33□□□□□ -1.08
TCF4-223ENST00000564343 CDC14CA4D256 554 aa8.33□□□□□ -1.08
TCF4-223ENST00000564343 RTEL1-TNFRSF6BF6WH68 1400 aa8.33□□□□□ -1.08
TCF4-223ENST00000564343 ITGA6P23229 1130 aa8.33□□□□□ -1.08
TCF4-223ENST00000564343 HSPA1LP34931 641 aa8.33□□□□□ -1.08
TCF4-223ENST00000564343 SUZ12Q15022 739 aaKnown RBP8.33□□□□□ -1.08
TCF4-223ENST00000564343 MED1Q15648 1581 aaPredicted RBP8.33□□□□□ -1.08
TCF4-223ENST00000564343 FOXD4L5Q5VV16 416 aaPredicted RBP8.33□□□□□ -1.08
TCF4-223ENST00000564343 ZNF385CQ66K41 422 aaPredicted RBP8.33□□□□□ -1.08
TCF4-223ENST00000564343 LYSMD3Q7Z3D4 306 aa8.33□□□□□ -1.08
TCF4-223ENST00000564343 KRTAP4-6Q9BYQ5 205 aa8.33□□□□□ -1.08
TCF4-223ENST00000564343 SNRKQ9NRH2 765 aa8.33□□□□□ -1.08
TCF4-223ENST00000564343 EHBP1L1Q8N3D4 1523 aa8.33□□□□□ -1.08
TCF4-223ENST00000564343 DHX29Q7Z478 1369 aaKnown RBP8.33□□□□□ -1.08
TCF4-223ENST00000564343 RNF144AP50876 292 aaPredicted RBP8.32□□□□□ -1.08
TCF4-223ENST00000564343 ERVK-9P63128 1117 aa8.32□□□□□ -1.08
TCF4-223ENST00000564343 PIP4K2BP78356 416 aa8.32□□□□□ -1.08
TCF4-223ENST00000564343 SV2AQ7L0J3 742 aa8.32□□□□□ -1.08
TCF4-223ENST00000564343 KDM5DQ9BY66 1539 aa8.32□□□□□ -1.08
TCF4-223ENST00000564343 ALKQ9UM73 1620 aa8.32□□□□□ -1.08
TCF4-223ENST00000564343 PZPP20742 1482 aa8.32□□□□□ -1.08
TCF4-223ENST00000564343 SHANK2Q9UPX8 1470 aa8.32□□□□□ -1.08
TCF4-223ENST00000564343 VWDEQ8N2E2 1590 aa8.31□□□□□ -1.08
TCF4-223ENST00000564343 CPS1P31327 1500 aa8.31□□□□□ -1.08
TCF4-223ENST00000564343 KIF3BO15066 747 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms