RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	OXLD1	Q5BKU9	147 aa		11.08	□□□□□ -0.64
MARK3-223	ENST00000561071	USP17L2	Q6R6M4	530 aa		11.08	□□□□□ -0.64
MARK3-223	ENST00000561071	USP17L1	Q7RTZ2	530 aa		11.08	□□□□□ -0.64
MARK3-223	ENST00000561071	HPS1	Q92902	700 aa		11.08	□□□□□ -0.64
MARK3-223	ENST00000561071	SETD1B	Q9UPS6	1966 aa	Known RBP	11.08	□□□□□ -0.64
MARK3-223	ENST00000561071	CNTLN	Q9NXG0	1405 aa		11.08	□□□□□ -0.64
MARK3-223	ENST00000561071	GFRA3	O60609	400 aa		11.07	□□□□□ -0.64
MARK3-223	ENST00000561071	DHX9	Q08211	1270 aa	Known RBP	11.07	□□□□□ -0.64
MARK3-223	ENST00000561071	NCOA4	Q13772	614 aa		11.07	□□□□□ -0.64
MARK3-223	ENST00000561071	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.07	□□□□□ -0.64
MARK3-223	ENST00000561071	STRC	Q7RTU9	1775 aa		11.07	□□□□□ -0.64
MARK3-223	ENST00000561071	VPS8	Q8N3P4	1428 aa		11.07	□□□□□ -0.64
MARK3-223	ENST00000561071	SCTR	P47872	440 aa		11.06	□□□□□ -0.64
MARK3-223	ENST00000561071	MAP7D1	Q3KQU3	841 aa		11.06	□□□□□ -0.64
MARK3-223	ENST00000561071	PLXNC1	O60486	1568 aa		11.06	□□□□□ -0.64
MARK3-223	ENST00000561071	CAMSAP2	Q08AD1	1489 aa		11.06	□□□□□ -0.64
MARK3-223	ENST00000561071	CLTC	Q00610	1675 aa	Known RBP	11.05	□□□□□ -0.64
MARK3-223	ENST00000561071	FAM187A	A6NFU0	413 aa		11.05	□□□□□ -0.64
MARK3-223	ENST00000561071	KIF3B	O15066	747 aa		11.05	□□□□□ -0.64
MARK3-223	ENST00000561071	ITPKC	Q96DU7	683 aa		11.05	□□□□□ -0.64
MARK3-223	ENST00000561071	KLF16	Q9BXK1	252 aa	Predicted RBP	11.05	□□□□□ -0.64
MARK3-223	ENST00000561071	CYLD	Q9NQC7	956 aa		11.05	□□□□□ -0.64
MARK3-223	ENST00000561071	LRRC9	Q6ZRR7	1453 aa		11.05	□□□□□ -0.64
MARK3-223	ENST00000561071	DHX29	Q7Z478	1369 aa	Known RBP	11.04	□□□□□ -0.64
MARK3-223	ENST00000561071	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.04	□□□□□ -0.64
MARK3-223	ENST00000561071	WDR4	P57081	412 aa	Known RBP	11.04	□□□□□ -0.64
MARK3-223	ENST00000561071	PLEKHM2	Q8IWE5	1019 aa		11.04	□□□□□ -0.64
MARK3-223	ENST00000561071	ZFAND3	Q9H8U3	227 aa		11.04	□□□□□ -0.64
MARK3-223	ENST00000561071	EMILIN1	Q9Y6C2	1016 aa		11.04	□□□□□ -0.64
MARK3-223	ENST00000561071	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.03	□□□□□ -0.64
MARK3-223	ENST00000561071	EML3	Q32P44	896 aa		11.03	□□□□□ -0.64
MARK3-223	ENST00000561071	CDCA8	Q53HL2	280 aa		11.03	□□□□□ -0.64
MARK3-223	ENST00000561071	CCDC125	Q86Z20	511 aa		11.03	□□□□□ -0.64
MARK3-223	ENST00000561071	CCDC141	Q6ZP82	1450 aa		11.03	□□□□□ -0.64
MARK3-223	ENST00000561071	NPAT	Q14207	1427 aa		11.02	□□□□□ -0.64
MARK3-223	ENST00000561071	PTPRK	Q15262	1439 aa		11.02	□□□□□ -0.64
MARK3-223	ENST00000561071	ADGB	Q8N7X0	1667 aa		11.02	□□□□□ -0.64
MARK3-223	ENST00000561071	LILRA1	O75019	489 aa		11.02	□□□□□ -0.65
MARK3-223	ENST00000561071	ZIC2	O95409	532 aa	Predicted RBP	11.02	□□□□□ -0.65
MARK3-223	ENST00000561071	TIMP2	P16035	220 aa		11.02	□□□□□ -0.65
MARK3-223	ENST00000561071	PGPEP1	Q9NXJ5	209 aa		11.02	□□□□□ -0.65
MARK3-223	ENST00000561071	MROH2A	A6NES4	1674 aa		11.01	□□□□□ -0.65
MARK3-223	ENST00000561071	NCOA1	Q15788	1441 aa		11.01	□□□□□ -0.65
MARK3-223	ENST00000561071	NRG2	O14511	850 aa	Predicted RBP	11.01	□□□□□ -0.65
MARK3-223	ENST00000561071	TSPY4	P0CV99	314 aa		11.01	□□□□□ -0.65
MARK3-223	ENST00000561071	TSPY10	P0CW01	314 aa		11.01	□□□□□ -0.65
MARK3-223	ENST00000561071	ADD1	P35611	737 aa	Known RBP	11.01	□□□□□ -0.65
MARK3-223	ENST00000561071	ERVK-9	P63128	1117 aa		11.01	□□□□□ -0.65
MARK3-223	ENST00000561071	MYT1	Q01538	1121 aa		11.01	□□□□□ -0.65
MARK3-223	ENST00000561071	CBLB	Q13191	982 aa		11.01	□□□□□ -0.65
MARK3-223	ENST00000561071	CC2D2B	Q6DHV5	1058 aa		11.01	□□□□□ -0.65
MARK3-223	ENST00000561071	MKRN1	Q9UHC7	482 aa	Known RBP	11.01	□□□□□ -0.65
MARK3-223	ENST00000561071	CAMSAP1	Q5T5Y3	1602 aa		11	□□□□□ -0.65
MARK3-223	ENST00000561071	SRPK2	P78362	688 aa	Known RBP	11	□□□□□ -0.65
MARK3-223	ENST00000561071	PTPRT	O14522	1441 aa		11	□□□□□ -0.65
MARK3-223	ENST00000561071	LZTS3	O60299	673 aa	Predicted RBP	10.99	□□□□□ -0.65
MARK3-223	ENST00000561071	USP4	Q13107	963 aa		10.99	□□□□□ -0.65
MARK3-223	ENST00000561071	OSBPL3	Q9H4L5	887 aa		10.99	□□□□□ -0.65
MARK3-223	ENST00000561071	NOD1	Q9Y239	953 aa		10.99	□□□□□ -0.65
MARK3-223	ENST00000561071	WASHC2C	Q9Y4E1	1318 aa		10.99	□□□□□ -0.65
MARK3-223	ENST00000561071	MYC	P01106	439 aa	Predicted RBP	10.98	□□□□□ -0.65
MARK3-223	ENST00000561071	PKDCC	Q504Y2	493 aa		10.98	□□□□□ -0.65
MARK3-223	ENST00000561071	IRX2	Q9BZI1	471 aa	Predicted RBP	10.98	□□□□□ -0.65
MARK3-223	ENST00000561071	VRTN	Q9H8Y1	702 aa		10.98	□□□□□ -0.65
MARK3-223	ENST00000561071	ARHGEF5	Q12774	1597 aa		10.98	□□□□□ -0.65
MARK3-223	ENST00000561071	PBXIP1	Q96AQ6	731 aa		10.97	□□□□□ -0.65
MARK3-223	ENST00000561071	MYOM3	Q5VTT5	1437 aa		10.97	□□□□□ -0.65
MARK3-223	ENST00000561071	MAP3K1	Q13233	1512 aa		10.97	□□□□□ -0.65
MARK3-223	ENST00000561071	MYO3A	Q8NEV4	1616 aa		10.96	□□□□□ -0.65
MARK3-223	ENST00000561071	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.96	□□□□□ -0.65
MARK3-223	ENST00000561071	CAPN5	O15484	640 aa	Predicted RBP	10.96	□□□□□ -0.65
MARK3-223	ENST00000561071	DGAT1	O75907	488 aa		10.96	□□□□□ -0.65
MARK3-223	ENST00000561071	AVP	P01185	164 aa		10.96	□□□□□ -0.65
MARK3-223	ENST00000561071	SIRT1	Q96EB6	747 aa		10.96	□□□□□ -0.65
MARK3-223	ENST00000561071	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.95	□□□□□ -0.66
MARK3-223	ENST00000561071	TNR	Q92752	1358 aa		10.95	□□□□□ -0.66
MARK3-223	ENST00000561071	STAU1	O95793	577 aa	Known RBP	10.95	□□□□□ -0.66
MARK3-223	ENST00000561071	GTF2I	P78347	998 aa		10.95	□□□□□ -0.66
MARK3-223	ENST00000561071	CLDN10	P78369	228 aa		10.95	□□□□□ -0.66
MARK3-223	ENST00000561071	KIAA1024	Q9UPX6	916 aa		10.95	□□□□□ -0.66
MARK3-223	ENST00000561071	PCDHGA11	Q9Y5H2	935 aa		10.95	□□□□□ -0.66
MARK3-223	ENST00000561071	LTBP4	Q8N2S1	1624 aa		10.95	□□□□□ -0.66
MARK3-223	ENST00000561071	MIA2	Q96PC5	1412 aa		10.94	□□□□□ -0.66
MARK3-223	ENST00000561071	ATP5J2-PTCD1	G3V325	749 aa		10.94	□□□□□ -0.66
MARK3-223	ENST00000561071	RASA1	P20936	1047 aa		10.94	□□□□□ -0.66
MARK3-223	ENST00000561071	LAPTM4A	Q15012	233 aa		10.94	□□□□□ -0.66
MARK3-223	ENST00000561071	CRTC2	Q53ET0	693 aa	Predicted RBP	10.94	□□□□□ -0.66
MARK3-223	ENST00000561071		Q6ZVU0	165 aa		10.94	□□□□□ -0.66
MARK3-223	ENST00000561071	OGFOD1	Q8N543	542 aa		10.94	□□□□□ -0.66
MARK3-223	ENST00000561071	AGBL1	Q96MI9	1066 aa		10.94	□□□□□ -0.66
MARK3-223	ENST00000561071	RRP7BP	Q9NSQ0	103 aa		10.94	□□□□□ -0.66
MARK3-223	ENST00000561071	KDM5D	Q9BY66	1539 aa		10.94	□□□□□ -0.66
MARK3-223	ENST00000561071	A2ML1	A8K2U0	1454 aa		10.93	□□□□□ -0.66
MARK3-223	ENST00000561071	KDF1	Q8NAX2	398 aa	Predicted RBP	10.93	□□□□□ -0.66
MARK3-223	ENST00000561071	ZNF594	Q96JF6	807 aa	Predicted RBP	10.93	□□□□□ -0.66
MARK3-223	ENST00000561071	ZBTB7B	O15156	539 aa	Predicted RBP	10.92	□□□□□ -0.66
MARK3-223	ENST00000561071	ADH1A	P07327	375 aa		10.92	□□□□□ -0.66
MARK3-223	ENST00000561071	TRIM50	Q86XT4	487 aa		10.92	□□□□□ -0.66
MARK3-223	ENST00000561071	MEIOB	Q8N635	442 aa		10.92	□□□□□ -0.66
MARK3-223	ENST00000561071	PZP	P20742	1482 aa		10.92	□□□□□ -0.66

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