RNA–Protein interactions for RNA: ENST00000544862.5

TNFSF11-205, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-205ENST00000544862 RIMS2Q9UQ26 1411 aa9.95□□□□□ -0.82
TNFSF11-205ENST00000544862 GCC2Q8IWJ2 1684 aa9.94□□□□□ -0.82
TNFSF11-205ENST00000544862 NLGN2Q8NFZ4 835 aa9.94□□□□□ -0.82
TNFSF11-205ENST00000544862 NKX2-3Q8TAU0 364 aa9.94□□□□□ -0.82
TNFSF11-205ENST00000544862 BEGAINQ9BUH8 593 aa9.94□□□□□ -0.82
TNFSF11-205ENST00000544862 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.94□□□□□ -0.82
TNFSF11-205ENST00000544862 MS4A1P11836 297 aa9.93□□□□□ -0.82
TNFSF11-205ENST00000544862 PPP1R18Q6NYC8 613 aa9.93□□□□□ -0.82
TNFSF11-205ENST00000544862 THAP11Q96EK4 314 aa9.93□□□□□ -0.82
TNFSF11-205ENST00000544862 SPSB2Q99619 263 aa9.93□□□□□ -0.82
TNFSF11-205ENST00000544862 SPIRE2Q8WWL2 714 aa9.92□□□□□ -0.82
TNFSF11-205ENST00000544862 TLL1O43897 1013 aa9.91□□□□□ -0.82
TNFSF11-205ENST00000544862 GJA5P36382 358 aa9.91□□□□□ -0.82
TNFSF11-205ENST00000544862 BRICD5Q6PL45 260 aa9.91□□□□□ -0.82
TNFSF11-205ENST00000544862 SLC6A16Q9GZN6 736 aa9.91□□□□□ -0.82
TNFSF11-205ENST00000544862 FYCO1Q9BQS8 1478 aa9.91□□□□□ -0.82
TNFSF11-205ENST00000544862 NPHP3Q7Z494 1330 aa9.9□□□□□ -0.82
TNFSF11-205ENST00000544862 CCDC141Q6ZP82 1450 aa9.9□□□□□ -0.83
TNFSF11-205ENST00000544862 SBF2Q86WG5 1849 aa9.89□□□□□ -0.83
TNFSF11-205ENST00000544862 SPATA31A5Q5VU36 1347 aa9.89□□□□□ -0.83
TNFSF11-205ENST00000544862 SPATA31A7Q8IWB4 1347 aa9.89□□□□□ -0.83
TNFSF11-205ENST00000544862 MSS51Q4VC12 460 aa9.89□□□□□ -0.83
TNFSF11-205ENST00000544862 COL24A1Q17RW2 1714 aa9.88□□□□□ -0.83
TNFSF11-205ENST00000544862 CCDC18Q5T9S5 1454 aa9.88□□□□□ -0.83
TNFSF11-205ENST00000544862 CABLES1Q8TDN4 633 aa9.88□□□□□ -0.83
TNFSF11-205ENST00000544862 CUL9Q8IWT3 2517 aa9.87□□□□□ -0.83
TNFSF11-205ENST00000544862 NRXN3Q9Y4C0 1643 aa9.87□□□□□ -0.83
TNFSF11-205ENST00000544862 ANKLE1Q8NAG6 615 aa9.87□□□□□ -0.83
TNFSF11-205ENST00000544862 PRDM10Q9NQV6 1147 aa9.87□□□□□ -0.83
TNFSF11-205ENST00000544862 TULP4Q9NRJ4 1543 aa9.87□□□□□ -0.83
TNFSF11-205ENST00000544862 CCDC85CA6NKD9 419 aa9.86□□□□□ -0.83
TNFSF11-205ENST00000544862 DLL1O00548 723 aa9.86□□□□□ -0.83
TNFSF11-205ENST00000544862 FOXN1O15353 648 aa9.86□□□□□ -0.83
TNFSF11-205ENST00000544862 FOXO3O43524 673 aa9.86□□□□□ -0.83
TNFSF11-205ENST00000544862 FDX1P10109 184 aa9.86□□□□□ -0.83
TNFSF11-205ENST00000544862 USB1Q9BQ65 265 aaKnown RBP9.86□□□□□ -0.83
TNFSF11-205ENST00000544862 TBC1D2Q9BYX2 928 aa9.86□□□□□ -0.83
TNFSF11-205ENST00000544862 DHX57Q6P158 1386 aaKnown RBP9.86□□□□□ -0.83
TNFSF11-205ENST00000544862 CCNB3Q8WWL7 1395 aa9.86□□□□□ -0.83
TNFSF11-205ENST00000544862 ARHGEF5Q12774 1597 aa9.85□□□□□ -0.83
TNFSF11-205ENST00000544862 RNF223E7ERA6 249 aa9.85□□□□□ -0.83
TNFSF11-205ENST00000544862 S1PR4O95977 384 aa9.85□□□□□ -0.83
TNFSF11-205ENST00000544862 SLC15A2Q16348 729 aa9.85□□□□□ -0.83
TNFSF11-205ENST00000544862 RNF19BQ6ZMZ0 732 aa9.85□□□□□ -0.83
TNFSF11-205ENST00000544862 DDRGK1Q96HY6 314 aa9.85□□□□□ -0.83
TNFSF11-205ENST00000544862 RSPH6AQ9H0K4 717 aa9.85□□□□□ -0.83
TNFSF11-205ENST00000544862 KDM4CQ9H3R0 1056 aa9.85□□□□□ -0.83
TNFSF11-205ENST00000544862 BTG4Q9NY30 223 aa9.85□□□□□ -0.83
TNFSF11-205ENST00000544862 V9GY48 417 aaPredicted RBP9.85□□□□□ -0.83
TNFSF11-205ENST00000544862 SPATA31A3Q5VYP0 1347 aa9.84□□□□□ -0.83
TNFSF11-205ENST00000544862 MOXD2PA6NHM9 499 aa9.84□□□□□ -0.83
TNFSF11-205ENST00000544862 PLSCR1O15162 318 aa9.84□□□□□ -0.83
TNFSF11-205ENST00000544862 FAM160A2Q8N612 972 aaPredicted RBP9.84□□□□□ -0.83
TNFSF11-205ENST00000544862 STK32BQ9NY57 414 aa9.84□□□□□ -0.83
TNFSF11-205ENST00000544862 TOPAZ1Q8N9V7 1692 aa9.83□□□□□ -0.84
TNFSF11-205ENST00000544862 COL14A1Q05707 1796 aaKnown RBP9.83□□□□□ -0.84
TNFSF11-205ENST00000544862 SPDYE5A6NIY4 337 aa9.83□□□□□ -0.84
TNFSF11-205ENST00000544862 TUSC1Q2TAM9 212 aa9.83□□□□□ -0.84
TNFSF11-205ENST00000544862 RETREG3Q86VR2 466 aa9.83□□□□□ -0.84
TNFSF11-205ENST00000544862 HLA-CQ95604 372 aa9.83□□□□□ -0.84
TNFSF11-205ENST00000544862 NMRK2Q9NPI5 230 aa9.83□□□□□ -0.84
TNFSF11-205ENST00000544862 LMTK2Q8IWU2 1503 aa9.82□□□□□ -0.84
TNFSF11-205ENST00000544862 SPTLC1O15269 473 aa9.82□□□□□ -0.84
TNFSF11-205ENST00000544862 RSBN1LQ6PCB5 846 aaPredicted RBP9.82□□□□□ -0.84
TNFSF11-205ENST00000544862 PEAK1Q9H792 1746 aa9.82□□□□□ -0.84
TNFSF11-205ENST00000544862 MMP16P51512 607 aa9.81□□□□□ -0.84
TNFSF11-205ENST00000544862 GUCA2AQ02747 115 aa9.81□□□□□ -0.84
TNFSF11-205ENST00000544862 ESCO1Q5FWF5 840 aa9.81□□□□□ -0.84
TNFSF11-205ENST00000544862 PCDHGC3Q9UN70 934 aa9.81□□□□□ -0.84
TNFSF11-205ENST00000544862 NDUFV2P19404 249 aa9.8□□□□□ -0.84
TNFSF11-205ENST00000544862 FSTL1Q12841 308 aa9.8□□□□□ -0.84
TNFSF11-205ENST00000544862 PRPF38BQ5VTL8 546 aaKnown RBP9.8□□□□□ -0.84
TNFSF11-205ENST00000544862 PTF1AQ7RTS3 328 aa9.8□□□□□ -0.84
TNFSF11-205ENST00000544862 RIC3Q7Z5B4 369 aa9.8□□□□□ -0.84
TNFSF11-205ENST00000544862 DUOX2Q9NRD8 1548 aa9.8□□□□□ -0.84
TNFSF11-205ENST00000544862 PRAG1Q86YV5 1406 aa9.8□□□□□ -0.84
TNFSF11-205ENST00000544862 RRBP1Q9P2E9 1410 aaKnown RBP9.8□□□□□ -0.84
TNFSF11-205ENST00000544862 PITPNM2Q9BZ72 1349 aa9.8□□□□□ -0.84
TNFSF11-205ENST00000544862 METP08581 1390 aa9.79□□□□□ -0.84
TNFSF11-205ENST00000544862 PDE3BQ13370 1112 aa9.79□□□□□ -0.84
TNFSF11-205ENST00000544862 MTMR2Q13614 643 aa9.79□□□□□ -0.84
TNFSF11-205ENST00000544862 MYSM1Q5VVJ2 828 aa9.79□□□□□ -0.84
TNFSF11-205ENST00000544862 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.79□□□□□ -0.84
TNFSF11-205ENST00000544862 PRKD2Q9BZL6 878 aa9.79□□□□□ -0.84
TNFSF11-205ENST00000544862 SLC52A1Q9NWF4 448 aa9.79□□□□□ -0.84
TNFSF11-205ENST00000544862 SPATA31A1Q5TZJ5 1347 aa9.79□□□□□ -0.84
TNFSF11-205ENST00000544862 C6orf229H3BNL8 230 aa9.78□□□□□ -0.84
TNFSF11-205ENST00000544862 DXOO77932 396 aaKnown RBP9.78□□□□□ -0.84
TNFSF11-205ENST00000544862 TECPR2O15040 1411 aa9.77□□□□□ -0.85
TNFSF11-205ENST00000544862 DESI1Q6ICB0 168 aa9.77□□□□□ -0.85
TNFSF11-205ENST00000544862 MPNDQ8N594 471 aa9.77□□□□□ -0.85
TNFSF11-205ENST00000544862 ZBTB3Q9H5J0 574 aa9.77□□□□□ -0.85
TNFSF11-205ENST00000544862 PAPPAQ13219 1627 aa9.76□□□□□ -0.85
TNFSF11-205ENST00000544862 PPEF1O14829 653 aaPredicted RBP9.76□□□□□ -0.85
TNFSF11-205ENST00000544862 JUNDP17535 347 aa9.76□□□□□ -0.85
TNFSF11-205ENST00000544862 FAM117AQ9C073 453 aa9.76□□□□□ -0.85
TNFSF11-205ENST00000544862 LRPPRCP42704 1394 aaKnown RBP9.75□□□□□ -0.85
TNFSF11-205ENST00000544862 TNS3Q68CZ2 1445 aa9.75□□□□□ -0.85
TNFSF11-205ENST00000544862 SLC19A1P41440 591 aa9.75□□□□□ -0.85
TNFSF11-205ENST00000544862 RPIAP49247 311 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms