RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
LINC01089-204ENST00000535643 SCN4AP35499 1836 aa16.19■□□□□ 0.18
LINC01089-204ENST00000535643 GYS1P13807 737 aa16.18■□□□□ 0.18
LINC01089-204ENST00000535643 CST9Q5W186 159 aa16.17■□□□□ 0.18
LINC01089-204ENST00000535643 NFAT5O94916 1531 aa16.17■□□□□ 0.18
LINC01089-204ENST00000535643 ANKRD24Q8TF21 1146 aa16.16■□□□□ 0.18
LINC01089-204ENST00000535643 SIN3AQ96ST3 1273 aa16.16■□□□□ 0.18
LINC01089-204ENST00000535643 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
LINC01089-204ENST00000535643 LAMA3Q16787 3333 aa16.15■□□□□ 0.18
LINC01089-204ENST00000535643 EPHX2P34913 555 aa16.14■□□□□ 0.17
LINC01089-204ENST00000535643 PLA2G5P39877 138 aa16.14■□□□□ 0.17
LINC01089-204ENST00000535643 TRAPPC3LQ5T215 181 aa16.14■□□□□ 0.17
LINC01089-204ENST00000535643 ZIC5Q96T25 663 aa16.14■□□□□ 0.17
LINC01089-204ENST00000535643 DICER1Q9UPY3 1922 aaKnown RBP16.13■□□□□ 0.17
LINC01089-204ENST00000535643 MPRIPQ6WCQ1 1025 aa16.13■□□□□ 0.17
LINC01089-204ENST00000535643 ZCRB1Q8TBF4 217 aaKnown RBP16.13■□□□□ 0.17
LINC01089-204ENST00000535643 HACL1Q9UJ83 578 aa16.13■□□□□ 0.17
LINC01089-204ENST00000535643 FANCIQ9NVI1 1328 aa16.13■□□□□ 0.17
LINC01089-204ENST00000535643 SAPCD2Q86UD0 394 aa16.12■□□□□ 0.17
LINC01089-204ENST00000535643 PNMA8AQ86V59 439 aaPredicted RBP16.12■□□□□ 0.17
LINC01089-204ENST00000535643 SMARCC1Q92922 1105 aaPredicted RBP16.12■□□□□ 0.17
LINC01089-204ENST00000535643 RBM19Q9Y4C8 960 aaKnown RBP16.12■□□□□ 0.17
LINC01089-204ENST00000535643 DDR1Q08345 913 aa16.11■□□□□ 0.17
LINC01089-204ENST00000535643 RAPGEFL1Q9UHV5 662 aa16.11■□□□□ 0.17
LINC01089-204ENST00000535643 ITPK1Q13572 414 aa16.1■□□□□ 0.17
LINC01089-204ENST00000535643 TTLL6Q8N841 843 aa16.1■□□□□ 0.17
LINC01089-204ENST00000535643 ARHGEF1Q92888 912 aaKnown RBP16.1■□□□□ 0.17
LINC01089-204ENST00000535643 SAGE1Q9NXZ1 904 aa16.1■□□□□ 0.17
LINC01089-204ENST00000535643 LOC102724428A0A0B4J2F2 783 aa16.09■□□□□ 0.17
LINC01089-204ENST00000535643 SIK1P57059 783 aa16.09■□□□□ 0.17
LINC01089-204ENST00000535643 SNX27Q96L92 541 aa16.09■□□□□ 0.17
LINC01089-204ENST00000535643 TRAF5O00463 557 aa16.08■□□□□ 0.16
LINC01089-204ENST00000535643 PKN2Q16513 984 aaKnown RBP16.08■□□□□ 0.16
LINC01089-204ENST00000535643 AKAP4Q5JQC9 854 aa16.08■□□□□ 0.16
LINC01089-204ENST00000535643 RTCBQ9Y3I0 505 aaKnown RBP16.08■□□□□ 0.16
LINC01089-204ENST00000535643 CHRDL2Q6WN34 429 aa16.07■□□□□ 0.16
LINC01089-204ENST00000535643 HHIPL1Q96JK4 782 aa16.07■□□□□ 0.16
LINC01089-204ENST00000535643 MAP2P11137 1827 aaKnown RBP16.06■□□□□ 0.16
LINC01089-204ENST00000535643 NOGQ13253 232 aa16.06■□□□□ 0.16
LINC01089-204ENST00000535643 FAM122AQ96E09 287 aa16.06■□□□□ 0.16
LINC01089-204ENST00000535643 POTEFA5A3E0 1075 aa16.05■□□□□ 0.16
LINC01089-204ENST00000535643 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
LINC01089-204ENST00000535643 RBM27Q9P2N5 1060 aaKnown RBP16.05■□□□□ 0.16
LINC01089-204ENST00000535643 RNF123Q5XPI4 1314 aa16.04■□□□□ 0.16
LINC01089-204ENST00000535643 TRPA1O75762 1119 aa16.04■□□□□ 0.16
LINC01089-204ENST00000535643 RFC4P35249 363 aa16.04■□□□□ 0.16
LINC01089-204ENST00000535643 MUC3AQ02505 3323 aa16.04■□□□□ 0.16
LINC01089-204ENST00000535643 H0YGN5 161 aa16.03■□□□□ 0.16
LINC01089-204ENST00000535643 CABP2Q9NPB3 220 aa16.03■□□□□ 0.16
LINC01089-204ENST00000535643 RNF186Q9NXI6 227 aa16.03■□□□□ 0.16
LINC01089-204ENST00000535643 TRPM7Q96QT4 1865 aa16.03■□□□□ 0.16
LINC01089-204ENST00000535643 INSRP06213 1382 aa16.02■□□□□ 0.16
LINC01089-204ENST00000535643 TAOK3Q9H2K8 898 aa16.02■□□□□ 0.16
LINC01089-204ENST00000535643 ZNF541Q9H0D2 1346 aa16.01■□□□□ 0.15
LINC01089-204ENST00000535643 LTBP3Q9NS15 1303 aa16.01■□□□□ 0.15
LINC01089-204ENST00000535643 POLRMTO00411 1230 aaKnown RBP16.01■□□□□ 0.15
LINC01089-204ENST00000535643 ATP6V1AP38606 617 aa16.01■□□□□ 0.15
LINC01089-204ENST00000535643 CENPFP49454 3210 aa16.01■□□□□ 0.15
LINC01089-204ENST00000535643 TTC21BQ7Z4L5 1316 aa16■□□□□ 0.15
LINC01089-204ENST00000535643 FER1L6Q2WGJ9 1857 aa16■□□□□ 0.15
LINC01089-204ENST00000535643 C21orf2O43822 256 aa16■□□□□ 0.15
LINC01089-204ENST00000535643 CCDC24Q8N4L8 307 aa16■□□□□ 0.15
LINC01089-204ENST00000535643 CABP1Q9NZU7 370 aa16■□□□□ 0.15
LINC01089-204ENST00000535643 TTC28Q96AY4 2481 aa15.99■□□□□ 0.15
LINC01089-204ENST00000535643 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.99■□□□□ 0.152e-6■■■□□ 17
LINC01089-204ENST00000535643 PIGBQ92521 554 aa15.99■□□□□ 0.15
LINC01089-204ENST00000535643 DLEC1Q9Y238 1755 aa15.99■□□□□ 0.15
LINC01089-204ENST00000535643 ERBB4Q15303 1308 aa15.98■□□□□ 0.15
LINC01089-204ENST00000535643 KIAA0100Q14667 2235 aaKnown RBP15.98■□□□□ 0.15
LINC01089-204ENST00000535643 HTTP42858 3142 aa15.98■□□□□ 0.15
LINC01089-204ENST00000535643 CELF2O95319 508 aaKnown RBP15.98■□□□□ 0.15
LINC01089-204ENST00000535643 SRPK2P78362 688 aaKnown RBP15.98■□□□□ 0.15
LINC01089-204ENST00000535643 FBXO46Q6PJ61 603 aaPredicted RBP15.97■□□□□ 0.15
LINC01089-204ENST00000535643 SYNE4Q8N205 404 aa15.96■□□□□ 0.15
LINC01089-204ENST00000535643 LTV1Q96GA3 475 aaPredicted RBP15.96■□□□□ 0.15
LINC01089-204ENST00000535643 BCL11AQ9H165 835 aa15.96■□□□□ 0.15
LINC01089-204ENST00000535643 PPP4R2Q9NY27 417 aa15.96■□□□□ 0.15
LINC01089-204ENST00000535643 SRP68Q9UHB9 627 aaKnown RBP15.96■□□□□ 0.15
LINC01089-204ENST00000535643 HDAC9Q9UKV0 1011 aa15.96■□□□□ 0.15
LINC01089-204ENST00000535643 USP31Q70CQ4 1352 aa15.96■□□□□ 0.15
LINC01089-204ENST00000535643 SCN11AQ9UI33 1791 aa15.95■□□□□ 0.14
LINC01089-204ENST00000535643 SOX1O00570 391 aaPredicted RBP15.95■□□□□ 0.14
LINC01089-204ENST00000535643 BICDL1Q6ZP65 573 aa15.95■□□□□ 0.14
LINC01089-204ENST00000535643 C2CD5Q86YS7 1000 aa15.95■□□□□ 0.14
LINC01089-204ENST00000535643 FAM208AQ9UK61 1670 aaKnown RBP15.95■□□□□ 0.14
LINC01089-204ENST00000535643 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
LINC01089-204ENST00000535643 EIF4G2P78344 907 aaKnown RBP eCLIP15.94■□□□□ 0.14
LINC01089-204ENST00000535643 LRCH3Q96II8 777 aa15.94■□□□□ 0.14
LINC01089-204ENST00000535643 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
LINC01089-204ENST00000535643 TM4SF1P30408 202 aa15.93■□□□□ 0.14
LINC01089-204ENST00000535643 HNRNPUQ00839 825 aaKnown RBP eCLIP15.93■□□□□ 0.14
LINC01089-204ENST00000535643 STXBP5LQ9Y2K9 1186 aa15.93■□□□□ 0.14
LINC01089-204ENST00000535643 ZBED9Q6R2W3 1325 aa15.93■□□□□ 0.14
LINC01089-204ENST00000535643 LTN1O94822 1766 aa15.92■□□□□ 0.14
LINC01089-204ENST00000535643 RPS6KA4O75676 772 aa15.92■□□□□ 0.14
LINC01089-204ENST00000535643 EN2P19622 333 aaPredicted RBP15.92■□□□□ 0.14
LINC01089-204ENST00000535643 KIF23Q02241 960 aaPredicted RBP15.92■□□□□ 0.14
LINC01089-204ENST00000535643 ITGB4P16144 1822 aa15.91■□□□□ 0.14
LINC01089-204ENST00000535643 FAM155AB1AL88 458 aaPredicted RBP15.91■□□□□ 0.14
LINC01089-204ENST00000535643 H0YIN7 160 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms