RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 LAMB4A4D0S4 1761 aa26.15■■□□□ 1.78
CDC42SE2-206ENST00000503291 TJP1Q07157 1748 aa26.15■■□□□ 1.78
CDC42SE2-206ENST00000503291 ZNF831Q5JPB2 1677 aa26.15■■□□□ 1.78
CDC42SE2-206ENST00000503291 A1BGP04217 495 aa26.15■■□□□ 1.78
CDC42SE2-206ENST00000503291 SUPT16HQ9Y5B9 1047 aaKnown RBP26.15■■□□□ 1.78
CDC42SE2-206ENST00000503291 PROM2Q8N271 834 aa26.14■■□□□ 1.78
CDC42SE2-206ENST00000503291 SF3B2Q13435 895 aaKnown RBP26.14■■□□□ 1.77
CDC42SE2-206ENST00000503291 PDIA6Q15084 440 aa26.14■■□□□ 1.77
CDC42SE2-206ENST00000503291 LRRC4BQ9NT99 713 aa26.14■■□□□ 1.77
CDC42SE2-206ENST00000503291 PIP4K2AP48426 406 aaPredicted RBP26.13■■□□□ 1.77
CDC42SE2-206ENST00000503291 TXNRD1Q16881 649 aa26.13■■□□□ 1.77
CDC42SE2-206ENST00000503291 SLC27A3Q5K4L6 730 aa26.13■■□□□ 1.77
CDC42SE2-206ENST00000503291 DDX21Q9NR30 783 aaKnown RBP eCLIP26.13■■□□□ 1.77
CDC42SE2-206ENST00000503291 ANXA1P04083 346 aa26.12■■□□□ 1.77
CDC42SE2-206ENST00000503291 BRPF1P55201 1214 aaPredicted RBP26.12■■□□□ 1.77
CDC42SE2-206ENST00000503291 PROSER3Q2NL68 480 aa26.12■■□□□ 1.77
CDC42SE2-206ENST00000503291 CICQ96RK0 1608 aaPredicted RBP26.12■■□□□ 1.77
CDC42SE2-206ENST00000503291 LINC00116Q8NCU8 138 aa26.12■■□□□ 1.77
CDC42SE2-206ENST00000503291 NBPF26B4DH59 902 aa26.11■■□□□ 1.77
CDC42SE2-206ENST00000503291 NBPF14Q5TI25 921 aa26.11■■□□□ 1.77
CDC42SE2-206ENST00000503291 NBPF10Q6P3W6 841 aaKnown RBP26.11■■□□□ 1.77
CDC42SE2-206ENST00000503291 NBPF15Q8N660 670 aa26.11■■□□□ 1.77
CDC42SE2-206ENST00000503291 ERBB4Q15303 1308 aa26.11■■□□□ 1.77
CDC42SE2-206ENST00000503291 MYL6BP14649 208 aa26.1■■□□□ 1.77
CDC42SE2-206ENST00000503291 CRKLP46109 303 aaKnown RBP26.1■■□□□ 1.77
CDC42SE2-206ENST00000503291 CCDC125Q86Z20 511 aa26.1■■□□□ 1.77
CDC42SE2-206ENST00000503291 EN1Q05925 392 aaPredicted RBP26.09■■□□□ 1.77
CDC42SE2-206ENST00000503291 INTS5Q6P9B9 1019 aaKnown RBP26.09■■□□□ 1.77
CDC42SE2-206ENST00000503291 G2E3Q7L622 706 aa26.09■■□□□ 1.77
CDC42SE2-206ENST00000503291 FRAT1Q92837 279 aaPredicted RBP26.09■■□□□ 1.77
CDC42SE2-206ENST00000503291 HYPKQ9NX55 129 aa26.09■■□□□ 1.77
CDC42SE2-206ENST00000503291 NOB1Q9ULX3 412 aaKnown RBP26.09■■□□□ 1.77
CDC42SE2-206ENST00000503291 PHAXQ9H814 394 aaKnown RBP26.09■■□□□ 1.77
CDC42SE2-206ENST00000503291 CCDC87Q9NVE4 849 aa26.08■■□□□ 1.77
CDC42SE2-206ENST00000503291 CACNA1FO60840 1977 aa26.08■■□□□ 1.77
CDC42SE2-206ENST00000503291 COL5A3P25940 1745 aaPredicted RBP26.08■■□□□ 1.76
CDC42SE2-206ENST00000503291 CANXP27824 592 aaKnown RBP26.07■■□□□ 1.76
CDC42SE2-206ENST00000503291 BAG6P46379 1132 aa26.07■■□□□ 1.76
CDC42SE2-206ENST00000503291 LRP10Q7Z4F1 713 aa26.07■■□□□ 1.76
CDC42SE2-206ENST00000503291 ZBTB1Q9Y2K1 713 aa26.07■■□□□ 1.76
CDC42SE2-206ENST00000503291 KIF16BQ96L93 1317 aa26.07■■□□□ 1.76
CDC42SE2-206ENST00000503291 CAMKK2Q96RR4 588 aa26.07■■□□□ 1.76
CDC42SE2-206ENST00000503291 PLIN1O60240 522 aa26.06■■□□□ 1.76
CDC42SE2-206ENST00000503291 ILDR2Q71H61 639 aa26.06■■□□□ 1.76
CDC42SE2-206ENST00000503291 DEFB132Q7Z7B7 95 aa26.06■■□□□ 1.76
CDC42SE2-206ENST00000503291 TAF1LQ8IZX4 1826 aa26.06■■□□□ 1.76
CDC42SE2-206ENST00000503291 FLIIQ13045 1269 aa26.05■■□□□ 1.76
CDC42SE2-206ENST00000503291 EZH2Q15910 746 aaKnown RBP26.05■■□□□ 1.76
CDC42SE2-206ENST00000503291 RNF123Q5XPI4 1314 aa26.05■■□□□ 1.76
CDC42SE2-206ENST00000503291 CNTNAP4Q9C0A0 1308 aa26.05■■□□□ 1.76
CDC42SE2-206ENST00000503291 MYH14Q7Z406 1995 aaKnown RBP26.05■■□□□ 1.76
CDC42SE2-206ENST00000503291 RRP1P56182 461 aaKnown RBP26.05■■□□□ 1.76
CDC42SE2-206ENST00000503291 RC3H1Q5TC82 1133 aaKnown RBP26.05■■□□□ 1.76
CDC42SE2-206ENST00000503291 RGPD3A6NKT7 1758 aaPredicted RBP26.05■■□□□ 1.76
CDC42SE2-206ENST00000503291 RGPD4Q7Z3J3 1758 aa26.05■■□□□ 1.76
CDC42SE2-206ENST00000503291 IPO8O15397 1037 aaKnown RBP26.04■■□□□ 1.76
CDC42SE2-206ENST00000503291 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.04■■□□□ 1.76
CDC42SE2-206ENST00000503291 AIMP1Q12904 312 aaKnown RBP26.03■■□□□ 1.76
CDC42SE2-206ENST00000503291 ZKSCAN2Q63HK3 967 aa26.03■■□□□ 1.76
CDC42SE2-206ENST00000503291 COPS6Q7L5N1 327 aa26.03■■□□□ 1.76
CDC42SE2-206ENST00000503291 ZNF330Q9Y3S2 320 aaPredicted RBP26.03■■□□□ 1.76
CDC42SE2-206ENST00000503291 HMGB2P26583 209 aaKnown RBP26.02■■□□□ 1.76
CDC42SE2-206ENST00000503291 IL6STP40189 918 aaPredicted RBP26.02■■□□□ 1.76
CDC42SE2-206ENST00000503291 UPF1Q92900 1129 aaKnown RBP eCLIP26.02■■□□□ 1.76
CDC42SE2-206ENST00000503291 FKBP5Q13451 457 aaPredicted RBP26.02■■□□□ 1.76
CDC42SE2-206ENST00000503291 XAGE3Q8WTP9 111 aa26.02■■□□□ 1.76
CDC42SE2-206ENST00000503291 ARHGAP45Q92619 1136 aa26.02■■□□□ 1.76
CDC42SE2-206ENST00000503291 PTPRCP08575 1304 aa26.02■■□□□ 1.76
CDC42SE2-206ENST00000503291 ATF7IPQ6VMQ6 1270 aa26.01■■□□□ 1.75
CDC42SE2-206ENST00000503291 C4BP0C0L5 1744 aa26.01■■□□□ 1.75
CDC42SE2-206ENST00000503291 EIF5P55010 431 aaKnown RBP26■■□□□ 1.75
CDC42SE2-206ENST00000503291 RREB1Q92766 1687 aa26■■□□□ 1.75
CDC42SE2-206ENST00000503291 GNPATO15228 680 aa25.99■■□□□ 1.75
CDC42SE2-206ENST00000503291 TRIM27P14373 513 aa25.99■■□□□ 1.75
CDC42SE2-206ENST00000503291 NPM2Q86SE8 214 aaKnown RBP25.98■■□□□ 1.75
CDC42SE2-206ENST00000503291 AK7Q96M32 723 aa25.98■■□□□ 1.75
CDC42SE2-206ENST00000503291 TNNQ9UQP3 1299 aa25.98■■□□□ 1.75
CDC42SE2-206ENST00000503291 RPS6KA4O75676 772 aa25.98■■□□□ 1.75
CDC42SE2-206ENST00000503291 TTLL7Q6ZT98 887 aa25.97■■□□□ 1.75
CDC42SE2-206ENST00000503291 CLUAP1Q96AJ1 413 aa25.97■■□□□ 1.75
CDC42SE2-206ENST00000503291 API5Q9BZZ5 524 aaKnown RBP25.97■■□□□ 1.75
CDC42SE2-206ENST00000503291 RTCBQ9Y3I0 505 aaKnown RBP25.97■■□□□ 1.75
CDC42SE2-206ENST00000503291 PI4KAP2A4QPH2 592 aa25.96■■□□□ 1.75
CDC42SE2-206ENST00000503291 ANKRD13DQ6ZTN6 518 aa25.96■■□□□ 1.75
CDC42SE2-206ENST00000503291 PI4KAP1Q8N8J0 262 aa25.96■■□□□ 1.75
CDC42SE2-206ENST00000503291 ARXQ96QS3 562 aa25.96■■□□□ 1.75
CDC42SE2-206ENST00000503291 F6X3S4 739 aa25.95■■□□□ 1.75
CDC42SE2-206ENST00000503291 DDX58O95786 925 aaKnown RBP25.95■■□□□ 1.75
CDC42SE2-206ENST00000503291 SMIM5Q71RC9 77 aa25.95■■□□□ 1.75
CDC42SE2-206ENST00000503291 C20orf194Q5TEA3 1177 aa25.95■■□□□ 1.74
CDC42SE2-206ENST00000503291 KSR2Q6VAB6 950 aa25.95■■□□□ 1.74
CDC42SE2-206ENST00000503291 AMIGO3Q86WK7 504 aa25.95■■□□□ 1.74
CDC42SE2-206ENST00000503291 DZIP1LQ8IYY4 767 aaKnown RBP25.93■■□□□ 1.74
CDC42SE2-206ENST00000503291 AKT1S1Q96B36 256 aa25.93■■□□□ 1.74
CDC42SE2-206ENST00000503291 TBC1D2BQ9UPU7 963 aa25.93■■□□□ 1.74
CDC42SE2-206ENST00000503291 ADCY9O60503 1353 aa25.93■■□□□ 1.74
CDC42SE2-206ENST00000503291 COL15A1P39059 1388 aa25.93■■□□□ 1.74
CDC42SE2-206ENST00000503291 PDE3AQ14432 1141 aa25.93■■□□□ 1.74
CDC42SE2-206ENST00000503291 ZNF827Q17R98 1081 aa25.93■■□□□ 1.74
CDC42SE2-206ENST00000503291 RIC3Q7Z5B4 369 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms