RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 DACH1Q9UI36 760 aa10.36□□□□□ -0.75
SMC4-217ENST00000485867 IQGAP3Q86VI3 1631 aa10.36□□□□□ -0.75
SMC4-217ENST00000485867 ADGRL2O95490 1459 aa10.36□□□□□ -0.75
SMC4-217ENST00000485867 SOS2Q07890 1332 aaPredicted RBP10.35□□□□□ -0.75
SMC4-217ENST00000485867 CTC1Q2NKJ3 1217 aa10.35□□□□□ -0.75
SMC4-217ENST00000485867 PTCRAQ6ISU1 281 aaPredicted RBP10.35□□□□□ -0.75
SMC4-217ENST00000485867 DEFB132Q7Z7B7 95 aa10.35□□□□□ -0.75
SMC4-217ENST00000485867 CHIC2Q9UKJ5 165 aa10.35□□□□□ -0.75
SMC4-217ENST00000485867 AXIN1O15169 862 aa10.34□□□□□ -0.75
SMC4-217ENST00000485867 MS4A1P11836 297 aa10.34□□□□□ -0.75
SMC4-217ENST00000485867 RC3H1Q5TC82 1133 aaKnown RBP10.34□□□□□ -0.75
SMC4-217ENST00000485867 AK7Q96M32 723 aa10.34□□□□□ -0.75
SMC4-217ENST00000485867 J3QL48 77 aa10.33□□□□□ -0.76
SMC4-217ENST00000485867 GJD4Q96KN9 370 aaPredicted RBP10.33□□□□□ -0.76
SMC4-217ENST00000485867 METP08581 1390 aa10.33□□□□□ -0.76
SMC4-217ENST00000485867 RALGAPBQ86X10 1494 aa10.32□□□□□ -0.76
SMC4-217ENST00000485867 CCNYL3P0C7X3 344 aa10.32□□□□□ -0.76
SMC4-217ENST00000485867 GJA5P36382 358 aa10.32□□□□□ -0.76
SMC4-217ENST00000485867 TBC1D2Q9BYX2 928 aa10.32□□□□□ -0.76
SMC4-217ENST00000485867 ANKRD50Q9ULJ7 1429 aa10.32□□□□□ -0.76
SMC4-217ENST00000485867 HRCP23327 699 aa10.31□□□□□ -0.76
SMC4-217ENST00000485867 MTMR2Q13614 643 aa10.31□□□□□ -0.76
SMC4-217ENST00000485867 PTPRNQ16849 979 aa10.31□□□□□ -0.76
SMC4-217ENST00000485867 PRR7Q8TB68 274 aa10.31□□□□□ -0.76
SMC4-217ENST00000485867 ORAI2Q96SN7 254 aa10.31□□□□□ -0.76
SMC4-217ENST00000485867 SPDYE5A6NIY4 337 aa10.3□□□□□ -0.76
SMC4-217ENST00000485867 DIXDC1Q155Q3 683 aa10.3□□□□□ -0.76
SMC4-217ENST00000485867 RSBN1LQ6PCB5 846 aaPredicted RBP10.3□□□□□ -0.76
SMC4-217ENST00000485867 SLIT2O94813 1529 aa10.29□□□□□ -0.76
SMC4-217ENST00000485867 SF3B2Q13435 895 aaKnown RBP10.29□□□□□ -0.76
SMC4-217ENST00000485867 DESI1Q6ICB0 168 aa10.29□□□□□ -0.76
SMC4-217ENST00000485867 PXDNQ92626 1479 aa10.29□□□□□ -0.76
SMC4-217ENST00000485867 EVA1BQ9NVM1 165 aa10.28□□□□□ -0.76
SMC4-217ENST00000485867 GMPR2Q9P2T1 348 aaKnown RBP10.28□□□□□ -0.76
SMC4-217ENST00000485867 USP32Q8NFA0 1604 aa10.27□□□□□ -0.77
SMC4-217ENST00000485867 SPTLC1O15269 473 aa10.27□□□□□ -0.77
SMC4-217ENST00000485867 SIAH2O43255 324 aa10.27□□□□□ -0.77
SMC4-217ENST00000485867 HPS1Q92902 700 aa10.27□□□□□ -0.77
SMC4-217ENST00000485867 PCDHB15Q9Y5E8 787 aa10.27□□□□□ -0.77
SMC4-217ENST00000485867 NEXMIFQ5QGS0 1516 aa10.27□□□□□ -0.77
SMC4-217ENST00000485867 PLCH1Q4KWH8 1693 aa10.26□□□□□ -0.77
SMC4-217ENST00000485867 SH3BP2P78314 561 aa10.26□□□□□ -0.77
SMC4-217ENST00000485867 UNC5CLQ8IV45 518 aa10.26□□□□□ -0.77
SMC4-217ENST00000485867 UNC93B1Q9H1C4 597 aa10.26□□□□□ -0.77
SMC4-217ENST00000485867 RGPD1P0DJD0 1748 aa10.26□□□□□ -0.77
SMC4-217ENST00000485867 PRAG1Q86YV5 1406 aa10.25□□□□□ -0.77
SMC4-217ENST00000485867 NWD2Q9ULI1 1742 aa10.25□□□□□ -0.77
SMC4-217ENST00000485867 YY1P25490 414 aa10.25□□□□□ -0.77
SMC4-217ENST00000485867 PDE4DQ08499 809 aa10.25□□□□□ -0.77
SMC4-217ENST00000485867 KCNH2Q12809 1159 aa10.25□□□□□ -0.77
SMC4-217ENST00000485867 SEPT12Q8IYM1 358 aa10.25□□□□□ -0.77
SMC4-217ENST00000485867 CDC42BPGQ6DT37 1551 aa10.25□□□□□ -0.77
SMC4-217ENST00000485867 NPHP3Q7Z494 1330 aa10.25□□□□□ -0.77
SMC4-217ENST00000485867 ROBO2Q9HCK4 1378 aa10.25□□□□□ -0.77
SMC4-217ENST00000485867 BAG6P46379 1132 aa10.24□□□□□ -0.77
SMC4-217ENST00000485867 EHBP1Q8NDI1 1231 aa10.24□□□□□ -0.77
SMC4-217ENST00000485867 CFAP99D6REC4 459 aa10.23□□□□□ -0.77
SMC4-217ENST00000485867 ALDH1A1P00352 501 aa10.23□□□□□ -0.77
SMC4-217ENST00000485867 RIC3Q7Z5B4 369 aa10.23□□□□□ -0.77
SMC4-217ENST00000485867 SLC24A3Q9HC58 644 aa10.23□□□□□ -0.77
SMC4-217ENST00000485867 ATP13A2Q9NQ11 1180 aa10.23□□□□□ -0.77
SMC4-217ENST00000485867 TNS1Q9HBL0 1735 aaKnown RBP10.23□□□□□ -0.77
SMC4-217ENST00000485867 ABCA3Q99758 1704 aa10.22□□□□□ -0.77
SMC4-217ENST00000485867 C11orf95C9JLR9 678 aaPredicted RBP10.22□□□□□ -0.77
SMC4-217ENST00000485867 LYPD8Q6UX82 237 aa10.22□□□□□ -0.77
SMC4-217ENST00000485867 KRT27Q7Z3Y8 459 aa10.22□□□□□ -0.77
SMC4-217ENST00000485867 ZBTB3Q9H5J0 574 aa10.22□□□□□ -0.77
SMC4-217ENST00000485867 CLTCL1P53675 1640 aa10.22□□□□□ -0.77
SMC4-217ENST00000485867 KIF1BO60333 1816 aa10.21□□□□□ -0.77
SMC4-217ENST00000485867 XPCQ01831 940 aaPredicted RBP10.21□□□□□ -0.77
SMC4-217ENST00000485867 R3HDM1Q15032 1099 aaKnown RBP10.21□□□□□ -0.77
SMC4-217ENST00000485867 VPS72Q15906 364 aa10.21□□□□□ -0.77
SMC4-217ENST00000485867 LINC01559Q495D7 138 aa10.21□□□□□ -0.77
SMC4-217ENST00000485867 ZNF326Q5BKZ1 582 aaKnown RBP10.21□□□□□ -0.77
SMC4-217ENST00000485867 PRPF38BQ5VTL8 546 aaKnown RBP10.21□□□□□ -0.77
SMC4-217ENST00000485867 BAP1Q92560 729 aa10.21□□□□□ -0.77
SMC4-217ENST00000485867 HFM1A2PYH4 1435 aa10.21□□□□□ -0.78
SMC4-217ENST00000485867 DISP2A7MBM2 1401 aa10.2□□□□□ -0.78
SMC4-217ENST00000485867 ESCO1Q5FWF5 840 aa10.2□□□□□ -0.78
SMC4-217ENST00000485867 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
SMC4-217ENST00000485867 NRAPQ86VF7 1730 aa10.2□□□□□ -0.78
SMC4-217ENST00000485867 ZNF511Q8NB15 262 aa10.2□□□□□ -0.78
SMC4-217ENST00000485867 CABLES1Q8TDN4 633 aa10.2□□□□□ -0.78
SMC4-217ENST00000485867 KIF1AQ12756 1690 aa10.19□□□□□ -0.78
SMC4-217ENST00000485867 FOXO3O43524 673 aa10.19□□□□□ -0.78
SMC4-217ENST00000485867 MYSM1Q5VVJ2 828 aa10.19□□□□□ -0.78
SMC4-217ENST00000485867 LIMD1Q9UGP4 676 aa10.19□□□□□ -0.78
SMC4-217ENST00000485867 NUP155O75694 1391 aa10.18□□□□□ -0.78
SMC4-217ENST00000485867 LRPPRCP42704 1394 aaKnown RBP10.18□□□□□ -0.78
SMC4-217ENST00000485867 SPATA31A3Q5VYP0 1347 aa10.18□□□□□ -0.78
SMC4-217ENST00000485867 TREML4Q6UXN2 200 aa10.18□□□□□ -0.78
SMC4-217ENST00000485867 FMN2Q9NZ56 1722 aa10.17□□□□□ -0.78
SMC4-217ENST00000485867 F12P00748 615 aaPredicted RBP10.17□□□□□ -0.78
SMC4-217ENST00000485867 FAM50AQ14320 339 aaKnown RBP10.17□□□□□ -0.78
SMC4-217ENST00000485867 CSPP1Q1MSJ5 1256 aa10.17□□□□□ -0.78
SMC4-217ENST00000485867 TUSC1Q2TAM9 212 aa10.17□□□□□ -0.78
SMC4-217ENST00000485867 TRIM47Q96LD4 638 aa10.17□□□□□ -0.78
SMC4-217ENST00000485867 RREB1Q92766 1687 aa10.16□□□□□ -0.78
SMC4-217ENST00000485867 SNRPBP14678 240 aaKnown RBP10.16□□□□□ -0.78
SMC4-217ENST00000485867 CTHP32929 405 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms