RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 ERBB4Q15303 1308 aa26.61■■□□□ 1.85
RXRB-204ENST00000483281 EIF2S2P20042 333 aaKnown RBP26.6■■□□□ 1.85
RXRB-204ENST00000483281 CYP19A1P11511 503 aaPredicted RBP26.6■■□□□ 1.85
RXRB-204ENST00000483281 SSH1Q8WYL5 1049 aa26.6■■□□□ 1.85
RXRB-204ENST00000483281 ITPK1Q13572 414 aa26.59■■□□□ 1.85
RXRB-204ENST00000483281 CCNL1Q9UK58 526 aaPredicted RBP26.59■■□□□ 1.85
RXRB-204ENST00000483281 SF3B2Q13435 895 aaKnown RBP26.58■■□□□ 1.85
RXRB-204ENST00000483281 DBF4Q9UBU7 674 aaPredicted RBP26.58■■□□□ 1.85
RXRB-204ENST00000483281 TAF1LQ8IZX4 1826 aa26.58■■□□□ 1.85
RXRB-204ENST00000483281 COL5A3P25940 1745 aaPredicted RBP26.58■■□□□ 1.85
RXRB-204ENST00000483281 STK31Q9BXU1 1019 aa26.58■■□□□ 1.85
RXRB-204ENST00000483281 PROM2Q8N271 834 aa26.57■■□□□ 1.84
RXRB-204ENST00000483281 TXNRD1Q16881 649 aa26.57■■□□□ 1.84
RXRB-204ENST00000483281 MRPL50Q8N5N7 158 aaKnown RBP26.57■■□□□ 1.84
RXRB-204ENST00000483281 DDX21Q9NR30 783 aaKnown RBP eCLIP26.57■■□□□ 1.84
RXRB-204ENST00000483281 PDIA6Q15084 440 aa26.56■■□□□ 1.84
RXRB-204ENST00000483281 RC3H1Q5TC82 1133 aaKnown RBP26.55■■□□□ 1.84
RXRB-204ENST00000483281 SLC4A2P04920 1241 aa26.55■■□□□ 1.84
RXRB-204ENST00000483281 NECTIN2Q92692 538 aa26.55■■□□□ 1.84
RXRB-204ENST00000483281 BCAR3O75815 825 aa26.54■■□□□ 1.84
RXRB-204ENST00000483281 BAG6P46379 1132 aa26.54■■□□□ 1.84
RXRB-204ENST00000483281 CAMKK2Q96RR4 588 aa26.54■■□□□ 1.84
RXRB-204ENST00000483281 LRRC4BQ9NT99 713 aa26.54■■□□□ 1.84
RXRB-204ENST00000483281 SMC4Q9NTJ3 1288 aa26.54■■□□□ 1.84
RXRB-204ENST00000483281 HYPKQ9NX55 129 aa26.53■■□□□ 1.84
RXRB-204ENST00000483281 CHPF2Q9P2E5 772 aa26.53■■□□□ 1.84
RXRB-204ENST00000483281 RREB1Q92766 1687 aa26.53■■□□□ 1.84
RXRB-204ENST00000483281 A1BGP04217 495 aa26.53■■□□□ 1.84
RXRB-204ENST00000483281 LINC00116Q8NCU8 138 aa26.53■■□□□ 1.84
RXRB-204ENST00000483281 MYH14Q7Z406 1995 aaKnown RBP26.52■■□□□ 1.84
RXRB-204ENST00000483281 CNTNAP4Q9C0A0 1308 aa26.52■■□□□ 1.84
RXRB-204ENST00000483281 NBPF26B4DH59 902 aa26.51■■□□□ 1.83
RXRB-204ENST00000483281 NBPF14Q5TI25 921 aa26.51■■□□□ 1.83
RXRB-204ENST00000483281 NBPF10Q6P3W6 841 aaKnown RBP26.51■■□□□ 1.83
RXRB-204ENST00000483281 INTS5Q6P9B9 1019 aaKnown RBP26.51■■□□□ 1.83
RXRB-204ENST00000483281 NBPF15Q8N660 670 aa26.51■■□□□ 1.83
RXRB-204ENST00000483281 CCDC87Q9NVE4 849 aa26.51■■□□□ 1.83
RXRB-204ENST00000483281 TCERG1O14776 1098 aaKnown RBP26.51■■□□□ 1.83
RXRB-204ENST00000483281 CRKLP46109 303 aaKnown RBP26.51■■□□□ 1.83
RXRB-204ENST00000483281 KCNQ4P56696 695 aa26.5■■□□□ 1.83
RXRB-204ENST00000483281 LRP10Q7Z4F1 713 aa26.5■■□□□ 1.83
RXRB-204ENST00000483281 BCL2L13Q9BXK5 485 aa26.49■■□□□ 1.83
RXRB-204ENST00000483281 RNF123Q5XPI4 1314 aa26.49■■□□□ 1.83
RXRB-204ENST00000483281 KIF16BQ96L93 1317 aa26.49■■□□□ 1.83
RXRB-204ENST00000483281 EN1Q05925 392 aaPredicted RBP26.49■■□□□ 1.83
RXRB-204ENST00000483281 ARHGAP45Q92619 1136 aa26.49■■□□□ 1.83
RXRB-204ENST00000483281 UPF1Q92900 1129 aaKnown RBP eCLIP26.49■■□□□ 1.83
RXRB-204ENST00000483281 IL6STP40189 918 aaPredicted RBP26.48■■□□□ 1.83
RXRB-204ENST00000483281 PROSER3Q2NL68 480 aa26.47■■□□□ 1.83
RXRB-204ENST00000483281 C4BP0C0L5 1744 aa26.47■■□□□ 1.83
RXRB-204ENST00000483281 IPO8O15397 1037 aaKnown RBP26.47■■□□□ 1.83
RXRB-204ENST00000483281 ILDR2Q71H61 639 aa26.47■■□□□ 1.83
RXRB-204ENST00000483281 ZBTB1Q9Y2K1 713 aa26.47■■□□□ 1.83
RXRB-204ENST00000483281 PTPRCP08575 1304 aa26.46■■□□□ 1.83
RXRB-204ENST00000483281 EZH2Q15910 746 aaKnown RBP26.46■■□□□ 1.83
RXRB-204ENST00000483281 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.46■■□□□ 1.83
RXRB-204ENST00000483281 MYL6BP14649 208 aa26.46■■□□□ 1.83
RXRB-204ENST00000483281 G2E3Q7L622 706 aa26.46■■□□□ 1.83
RXRB-204ENST00000483281 NOB1Q9ULX3 412 aaKnown RBP26.46■■□□□ 1.83
RXRB-204ENST00000483281 ANXA1P04083 346 aa26.45■■□□□ 1.82
RXRB-204ENST00000483281 EIF5P55010 431 aaKnown RBP26.45■■□□□ 1.82
RXRB-204ENST00000483281 PHAXQ9H814 394 aaKnown RBP26.45■■□□□ 1.82
RXRB-204ENST00000483281 RPS6KA4O75676 772 aa26.44■■□□□ 1.82
RXRB-204ENST00000483281 CANXP27824 592 aaKnown RBP26.44■■□□□ 1.82
RXRB-204ENST00000483281 FLIIQ13045 1269 aa26.44■■□□□ 1.82
RXRB-204ENST00000483281 DEFB132Q7Z7B7 95 aa26.43■■□□□ 1.82
RXRB-204ENST00000483281 PIP4K2AP48426 406 aaPredicted RBP26.42■■□□□ 1.82
RXRB-204ENST00000483281 ZKSCAN2Q63HK3 967 aa26.42■■□□□ 1.82
RXRB-204ENST00000483281 COPS6Q7L5N1 327 aa26.42■■□□□ 1.82
RXRB-204ENST00000483281 RRP1P56182 461 aaKnown RBP26.41■■□□□ 1.82
RXRB-204ENST00000483281 XAGE3Q8WTP9 111 aa26.4■■□□□ 1.82
RXRB-204ENST00000483281 FRAT1Q92837 279 aaPredicted RBP26.4■■□□□ 1.82
RXRB-204ENST00000483281 API5Q9BZZ5 524 aaKnown RBP26.4■■□□□ 1.82
RXRB-204ENST00000483281 ATF7IPQ6VMQ6 1270 aa26.4■■□□□ 1.82
RXRB-204ENST00000483281 AKT1S1Q96B36 256 aa26.4■■□□□ 1.82
RXRB-204ENST00000483281 AK7Q96M32 723 aa26.4■■□□□ 1.82
RXRB-204ENST00000483281 DDX58O95786 925 aaKnown RBP26.39■■□□□ 1.82
RXRB-204ENST00000483281 RTCBQ9Y3I0 505 aaKnown RBP26.39■■□□□ 1.82
RXRB-204ENST00000483281 UBR3Q6ZT12 1888 aa26.39■■□□□ 1.81
RXRB-204ENST00000483281 A0A087WZG4 1122 aa26.38■■□□□ 1.81
RXRB-204ENST00000483281 MS4A1P11836 297 aa26.38■■□□□ 1.81
RXRB-204ENST00000483281 NPM2Q86SE8 214 aaKnown RBP26.38■■□□□ 1.81
RXRB-204ENST00000483281 FKBP5Q13451 457 aaPredicted RBP26.38■■□□□ 1.81
RXRB-204ENST00000483281 ANKRD13DQ6ZTN6 518 aa26.38■■□□□ 1.81
RXRB-204ENST00000483281 GNPATO15228 680 aa26.37■■□□□ 1.81
RXRB-204ENST00000483281 KSR2Q6VAB6 950 aa26.37■■□□□ 1.81
RXRB-204ENST00000483281 NUP188Q5SRE5 1749 aa26.37■■□□□ 1.81
RXRB-204ENST00000483281 ADRA2BP18089 450 aa26.37■■□□□ 1.81
RXRB-204ENST00000483281 AIMP1Q12904 312 aaKnown RBP26.37■■□□□ 1.81
RXRB-204ENST00000483281 PDE3AQ14432 1141 aa26.37■■□□□ 1.81
RXRB-204ENST00000483281 TRIM27P14373 513 aa26.36■■□□□ 1.81
RXRB-204ENST00000483281 PLBD2Q8NHP8 589 aa26.36■■□□□ 1.81
RXRB-204ENST00000483281 PLIN1O60240 522 aa26.35■■□□□ 1.81
RXRB-204ENST00000483281 TTLL7Q6ZT98 887 aa26.35■■□□□ 1.81
RXRB-204ENST00000483281 RGL2O15211 777 aa26.35■■□□□ 1.81
RXRB-204ENST00000483281 SSFA2P28290 1259 aa26.35■■□□□ 1.81
RXRB-204ENST00000483281 COL15A1P39059 1388 aa26.35■■□□□ 1.81
RXRB-204ENST00000483281 PI4KAP2A4QPH2 592 aa26.34■■□□□ 1.81
RXRB-204ENST00000483281 ERVV-1B6SEH8 477 aa26.34■■□□□ 1.81
RXRB-204ENST00000483281 TRAPPC3LQ5T215 181 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms