RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 AKAP4Q5JQC9 854 aa10.92□□□□□ -0.66
SSXP3-201ENST00000442971 SAGE1Q9NXZ1 904 aa10.92□□□□□ -0.66
SSXP3-201ENST00000442971 HACL1Q9UJ83 578 aa10.92□□□□□ -0.66
SSXP3-201ENST00000442971 TRAPPC3LQ5T215 181 aa10.91□□□□□ -0.66
SSXP3-201ENST00000442971 SAPCD2Q86UD0 394 aa10.91□□□□□ -0.66
SSXP3-201ENST00000442971 SPTBN5Q9NRC6 3674 aaKnown RBP10.91□□□□□ -0.66
SSXP3-201ENST00000442971 CHRDL2Q6WN34 429 aa10.9□□□□□ -0.66
SSXP3-201ENST00000442971 SMARCC1Q92922 1105 aaPredicted RBP10.9□□□□□ -0.66
SSXP3-201ENST00000442971 HHIPL1Q96JK4 782 aa10.9□□□□□ -0.66
SSXP3-201ENST00000442971 ZIC5Q96T25 663 aa10.9□□□□□ -0.66
SSXP3-201ENST00000442971 NOGQ13253 232 aa10.89□□□□□ -0.67
SSXP3-201ENST00000442971 TTLL6Q8N841 843 aa10.89□□□□□ -0.67
SSXP3-201ENST00000442971 RBM27Q9P2N5 1060 aaKnown RBP10.89□□□□□ -0.67
SSXP3-201ENST00000442971 BRCA2P51587 3418 aa10.89□□□□□ -0.67
SSXP3-201ENST00000442971 ZCRB1Q8TBF4 217 aaKnown RBP10.88□□□□□ -0.67
SSXP3-201ENST00000442971 ANKRD24Q8TF21 1146 aa10.88□□□□□ -0.67
SSXP3-201ENST00000442971 POTEFA5A3E0 1075 aa10.87□□□□□ -0.67
SSXP3-201ENST00000442971 H0YGN5 161 aa10.87□□□□□ -0.67
SSXP3-201ENST00000442971 TRPA1O75762 1119 aa10.87□□□□□ -0.67
SSXP3-201ENST00000442971 MPRIPQ6WCQ1 1025 aa10.87□□□□□ -0.67
SSXP3-201ENST00000442971 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.87□□□□□ -0.67
SSXP3-201ENST00000442971 CCDC24Q8N4L8 307 aa10.87□□□□□ -0.67
SSXP3-201ENST00000442971 ERBB4Q15303 1308 aa10.87□□□□□ -0.67
SSXP3-201ENST00000442971 NFAT5O94916 1531 aa10.87□□□□□ -0.67
SSXP3-201ENST00000442971 TRAF5O00463 557 aa10.86□□□□□ -0.67
SSXP3-201ENST00000442971 ARHGEF1Q92888 912 aaKnown RBP10.86□□□□□ -0.67
SSXP3-201ENST00000442971 CABP2Q9NPB3 220 aa10.86□□□□□ -0.67
SSXP3-201ENST00000442971 RNF186Q9NXI6 227 aa10.86□□□□□ -0.67
SSXP3-201ENST00000442971 RTCBQ9Y3I0 505 aaKnown RBP10.86□□□□□ -0.67
SSXP3-201ENST00000442971 FER1L6Q2WGJ9 1857 aa10.86□□□□□ -0.67
SSXP3-201ENST00000442971 ADGRB1O14514 1584 aa10.86□□□□□ -0.67
SSXP3-201ENST00000442971 MAP2P11137 1827 aaKnown RBP10.86□□□□□ -0.67
SSXP3-201ENST00000442971 LOC102724428A0A0B4J2F2 783 aa10.85□□□□□ -0.67
SSXP3-201ENST00000442971 SIK1P57059 783 aa10.85□□□□□ -0.67
SSXP3-201ENST00000442971 DDR1Q08345 913 aa10.85□□□□□ -0.67
SSXP3-201ENST00000442971 DLEC1Q9Y238 1755 aa10.85□□□□□ -0.67
SSXP3-201ENST00000442971 RFC4P35249 363 aa10.84□□□□□ -0.67
SSXP3-201ENST00000442971 ITPK1Q13572 414 aa10.84□□□□□ -0.67
SSXP3-201ENST00000442971 FBXO46Q6PJ61 603 aaPredicted RBP10.84□□□□□ -0.67
SSXP3-201ENST00000442971 STXBP5LQ9Y2K9 1186 aa10.84□□□□□ -0.67
SSXP3-201ENST00000442971 INSRP06213 1382 aa10.84□□□□□ -0.67
SSXP3-201ENST00000442971 AKAP11Q9UKA4 1901 aa10.84□□□□□ -0.67
SSXP3-201ENST00000442971 HDAC9Q9UKV0 1011 aa10.84□□□□□ -0.67
SSXP3-201ENST00000442971 RNF123Q5XPI4 1314 aa10.83□□□□□ -0.68
SSXP3-201ENST00000442971 LTBP3Q9NS15 1303 aa10.83□□□□□ -0.68
SSXP3-201ENST00000442971 TAOK3Q9H2K8 898 aa10.83□□□□□ -0.68
SSXP3-201ENST00000442971 LAMB4A4D0S4 1761 aa10.82□□□□□ -0.68
SSXP3-201ENST00000442971 PAPPA2Q9BXP8 1791 aa10.82□□□□□ -0.68
SSXP3-201ENST00000442971 SCN11AQ9UI33 1791 aa10.82□□□□□ -0.68
SSXP3-201ENST00000442971 KIAA0100Q14667 2235 aaKnown RBP10.82□□□□□ -0.68
SSXP3-201ENST00000442971 CELF2O95319 508 aaKnown RBP10.82□□□□□ -0.68
SSXP3-201ENST00000442971 ANKRD13DQ6ZTN6 518 aa10.82□□□□□ -0.68
SSXP3-201ENST00000442971 SYNE4Q8N205 404 aa10.82□□□□□ -0.68
SSXP3-201ENST00000442971 C21orf2O43822 256 aa10.81□□□□□ -0.68
SSXP3-201ENST00000442971 ATP6V1AP38606 617 aa10.81□□□□□ -0.68
SSXP3-201ENST00000442971 ZNF541Q9H0D2 1346 aa10.81□□□□□ -0.68
SSXP3-201ENST00000442971 RBBP6Q7Z6E9 1792 aaKnown RBP10.8□□□□□ -0.68
SSXP3-201ENST00000442971 POLRMTO00411 1230 aaKnown RBP10.8□□□□□ -0.68
SSXP3-201ENST00000442971 SOX1O00570 391 aaPredicted RBP10.8□□□□□ -0.68
SSXP3-201ENST00000442971 ITGB4P16144 1822 aa10.8□□□□□ -0.68
SSXP3-201ENST00000442971 FKBP8Q14318 412 aa10.8□□□□□ -0.68
SSXP3-201ENST00000442971 INTS3Q68E01 1043 aaKnown RBP10.8□□□□□ -0.68
SSXP3-201ENST00000442971 BICDL1Q6ZP65 573 aa10.8□□□□□ -0.68
SSXP3-201ENST00000442971 LRCH3Q96II8 777 aa10.8□□□□□ -0.68
SSXP3-201ENST00000442971 LAMA3Q16787 3333 aa10.79□□□□□ -0.68
SSXP3-201ENST00000442971 TTC28Q96AY4 2481 aa10.79□□□□□ -0.68
SSXP3-201ENST00000442971 EN2P19622 333 aaPredicted RBP10.79□□□□□ -0.68
SSXP3-201ENST00000442971 C2CD5Q86YS7 1000 aa10.79□□□□□ -0.68
SSXP3-201ENST00000442971 KIF23Q02241 960 aaPredicted RBP10.78□□□□□ -0.68
SSXP3-201ENST00000442971 PIGBQ92521 554 aa10.78□□□□□ -0.68
SSXP3-201ENST00000442971 LTN1O94822 1766 aa10.78□□□□□ -0.68
SSXP3-201ENST00000442971 SMG6Q86US8 1419 aaKnown RBP10.77□□□□□ -0.69
SSXP3-201ENST00000442971 USP31Q70CQ4 1352 aa10.77□□□□□ -0.69
SSXP3-201ENST00000442971 H0YIN7 160 aa10.77□□□□□ -0.69
SSXP3-201ENST00000442971 PRO3102Q9H379 93 aa10.77□□□□□ -0.69
SSXP3-201ENST00000442971 FAM208AQ9UK61 1670 aaKnown RBP10.76□□□□□ -0.69
SSXP3-201ENST00000442971 TTC21BQ7Z4L5 1316 aa10.76□□□□□ -0.69
SSXP3-201ENST00000442971 FAM155AB1AL88 458 aaPredicted RBP10.76□□□□□ -0.69
SSXP3-201ENST00000442971 DEFB123Q8N688 67 aa10.76□□□□□ -0.69
SSXP3-201ENST00000442971 ZNF296Q8WUU4 475 aaPredicted RBP10.76□□□□□ -0.69
SSXP3-201ENST00000442971 CABP1Q9NZU7 370 aa10.76□□□□□ -0.69
SSXP3-201ENST00000442971 RPS6KA4O75676 772 aa10.75□□□□□ -0.69
SSXP3-201ENST00000442971 TM4SF1P30408 202 aa10.75□□□□□ -0.69
SSXP3-201ENST00000442971 SRPK2P78362 688 aaKnown RBP10.75□□□□□ -0.69
SSXP3-201ENST00000442971 SRP68Q9UHB9 627 aaKnown RBP10.75□□□□□ -0.69
SSXP3-201ENST00000442971 CENPFP49454 3210 aa10.75□□□□□ -0.69
SSXP3-201ENST00000442971 SYNGAP1Q96PV0 1343 aa10.74□□□□□ -0.69
SSXP3-201ENST00000442971 ITGAEP38570 1179 aa10.74□□□□□ -0.69
SSXP3-201ENST00000442971 HUNKP57058 714 aa10.74□□□□□ -0.69
SSXP3-201ENST00000442971 RC3H1Q5TC82 1133 aaKnown RBP10.74□□□□□ -0.69
SSXP3-201ENST00000442971 LTV1Q96GA3 475 aaPredicted RBP10.74□□□□□ -0.69
SSXP3-201ENST00000442971 ZNF408Q9H9D4 720 aa10.74□□□□□ -0.69
SSXP3-201ENST00000442971 AFDNP55196 1824 aaKnown RBP10.74□□□□□ -0.69
SSXP3-201ENST00000442971 MUC3AQ02505 3323 aa10.73□□□□□ -0.69
SSXP3-201ENST00000442971 PIEZO1Q92508 2521 aa10.73□□□□□ -0.69
SSXP3-201ENST00000442971 HTTP42858 3142 aa10.73□□□□□ -0.69
SSXP3-201ENST00000442971 GPC2Q8N158 579 aa10.73□□□□□ -0.69
SSXP3-201ENST00000442971 ZNF622Q969S3 477 aaKnown RBP eCLIP10.73□□□□□ -0.69
SSXP3-201ENST00000442971 CSRNP1Q96S65 589 aa10.73□□□□□ -0.69
SSXP3-201ENST00000442971 TTC21AQ8NDW8 1320 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms