RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 RIMS2Q9UQ26 1411 aa24.56■■□□□ 1.52
TMEFF1-201ENST00000374879 CERS3Q8IU89 383 aa24.56■■□□□ 1.52
TMEFF1-201ENST00000374879 DRC7Q8IY82 874 aa24.56■■□□□ 1.52
TMEFF1-201ENST00000374879 CCDC192P0DO97 292 aa24.55■■□□□ 1.52
TMEFF1-201ENST00000374879 ZSCAN25Q6NSZ9 544 aa24.55■■□□□ 1.52
TMEFF1-201ENST00000374879 FBXO38Q6PIJ6 1188 aa24.55■■□□□ 1.52
TMEFF1-201ENST00000374879 C8orf58Q8NAV2 365 aa24.55■■□□□ 1.52
TMEFF1-201ENST00000374879 ANO2Q9NQ90 1003 aa24.55■■□□□ 1.52
TMEFF1-201ENST00000374879 ZNF215Q9UL58 517 aaPredicted RBP24.55■■□□□ 1.52
TMEFF1-201ENST00000374879 PDE1AP54750 535 aa24.55■■□□□ 1.52
TMEFF1-201ENST00000374879 ANAPC15P60006 121 aa24.55■■□□□ 1.52
TMEFF1-201ENST00000374879 TSHZ3Q63HK5 1081 aa24.55■■□□□ 1.52
TMEFF1-201ENST00000374879 LUZP1Q86V48 1076 aa24.55■■□□□ 1.52
TMEFF1-201ENST00000374879 EMILIN1Q9Y6C2 1016 aa24.55■■□□□ 1.52
TMEFF1-201ENST00000374879 CEP135Q66GS9 1140 aa24.54■■□□□ 1.52
TMEFF1-201ENST00000374879 NFE2L2Q16236 605 aa24.54■■□□□ 1.52
TMEFF1-201ENST00000374879 MAP2P11137 1827 aaKnown RBP24.54■■□□□ 1.52
TMEFF1-201ENST00000374879 HNRNPH2P55795 449 aaKnown RBP24.53■■□□□ 1.52
TMEFF1-201ENST00000374879 FAM200AQ8TCP9 573 aa24.53■■□□□ 1.52
TMEFF1-201ENST00000374879 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.53■■□□□ 1.52
TMEFF1-201ENST00000374879 KIF24Q5T7B8 1368 aa24.53■■□□□ 1.52
TMEFF1-201ENST00000374879 MLECQ14165 292 aa24.52■■□□□ 1.52
TMEFF1-201ENST00000374879 RTF1Q92541 710 aaKnown RBP24.52■■□□□ 1.52
TMEFF1-201ENST00000374879 PPP6R1Q9UPN7 881 aa24.52■■□□□ 1.52
TMEFF1-201ENST00000374879 STX6O43752 255 aa24.52■■□□□ 1.52
TMEFF1-201ENST00000374879 SYT1P21579 422 aa24.52■■□□□ 1.52
TMEFF1-201ENST00000374879 GNAI1P63096 354 aa24.52■■□□□ 1.52
TMEFF1-201ENST00000374879 KRT24Q2M2I5 525 aa24.52■■□□□ 1.52
TMEFF1-201ENST00000374879 NME9Q86XW9 330 aa24.51■■□□□ 1.51
TMEFF1-201ENST00000374879 OSBPL3Q9H4L5 887 aa24.51■■□□□ 1.51
TMEFF1-201ENST00000374879 FEZ2Q9UHY8 353 aaPredicted RBP24.51■■□□□ 1.51
TMEFF1-201ENST00000374879 F13A1P00488 732 aa24.51■■□□□ 1.51
TMEFF1-201ENST00000374879 CYP2C19P33261 490 aa24.51■■□□□ 1.51
TMEFF1-201ENST00000374879 ELF2Q15723 593 aa24.5■■□□□ 1.51
TMEFF1-201ENST00000374879 SETD1AO15047 1707 aaKnown RBP24.5■■□□□ 1.51
TMEFF1-201ENST00000374879 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
TMEFF1-201ENST00000374879 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
TMEFF1-201ENST00000374879 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
TMEFF1-201ENST00000374879 WASLO00401 505 aaPredicted RBP24.5■■□□□ 1.51
TMEFF1-201ENST00000374879 KLHL34Q8N239 644 aa24.5■■□□□ 1.51
TMEFF1-201ENST00000374879 CACTINQ8WUQ7 758 aaKnown RBP24.5■■□□□ 1.51
TMEFF1-201ENST00000374879 NOL10Q9BSC4 688 aaKnown RBP24.5■■□□□ 1.51
TMEFF1-201ENST00000374879 IRX3P78415 501 aaPredicted RBP24.49■■□□□ 1.51
TMEFF1-201ENST00000374879 KIF1BPQ96EK5 621 aa24.49■■□□□ 1.51
TMEFF1-201ENST00000374879 ZNF446Q9NWS9 450 aa24.49■■□□□ 1.51
TMEFF1-201ENST00000374879 ZRANB1Q9UGI0 708 aa24.49■■□□□ 1.51
TMEFF1-201ENST00000374879 MRVI1Q9Y6F6 885 aa24.49■■□□□ 1.51
TMEFF1-201ENST00000374879 EDC4Q6P2E9 1401 aaKnown RBP24.49■■□□□ 1.51
TMEFF1-201ENST00000374879 FAM193AP78312 1265 aa24.49■■□□□ 1.51
TMEFF1-201ENST00000374879 DNM1Q05193 864 aaKnown RBP24.49■■□□□ 1.51
TMEFF1-201ENST00000374879 CPSF1Q10570 1443 aaKnown RBP24.49■■□□□ 1.51
TMEFF1-201ENST00000374879 SPATA31D1Q6ZQQ2 1576 aa24.49■■□□□ 1.51
TMEFF1-201ENST00000374879 TSPOAP1O95153 1857 aa24.49■■□□□ 1.51
TMEFF1-201ENST00000374879 IL13P35225 146 aa24.48■■□□□ 1.51
TMEFF1-201ENST00000374879 LARP6Q9BRS8 491 aaKnown RBP24.48■■□□□ 1.51
TMEFF1-201ENST00000374879 AGLP35573 1532 aa24.48■■□□□ 1.51
TMEFF1-201ENST00000374879 ZNF853P0CG23 659 aa24.48■■□□□ 1.51
TMEFF1-201ENST00000374879 TRIM5Q9C035 493 aa24.48■■□□□ 1.51
TMEFF1-201ENST00000374879 TSPYL1Q9H0U9 437 aa24.48■■□□□ 1.51
TMEFF1-201ENST00000374879 DTNBO60941 627 aa24.47■■□□□ 1.51
TMEFF1-201ENST00000374879 CHMLP26374 656 aa24.47■■□□□ 1.51
TMEFF1-201ENST00000374879 ZNF75DP51815 510 aa24.47■■□□□ 1.51
TMEFF1-201ENST00000374879 TYRO3Q06418 890 aa24.47■■□□□ 1.51
TMEFF1-201ENST00000374879 CAMK4Q16566 473 aa24.47■■□□□ 1.51
TMEFF1-201ENST00000374879 AEBP2Q6ZN18 517 aaPredicted RBP24.47■■□□□ 1.51
TMEFF1-201ENST00000374879 TXNDC2Q86VQ3 553 aa24.47■■□□□ 1.51
TMEFF1-201ENST00000374879 USP27XA6NNY8 438 aa24.46■■□□□ 1.51
TMEFF1-201ENST00000374879 PLA2G4DQ86XP0 818 aa24.46■■□□□ 1.51
TMEFF1-201ENST00000374879 MEIS3Q99687 375 aa24.46■■□□□ 1.51
TMEFF1-201ENST00000374879 METP08581 1390 aa24.46■■□□□ 1.51
TMEFF1-201ENST00000374879 CREBRFQ8IUR6 639 aa24.46■■□□□ 1.51
TMEFF1-201ENST00000374879 AEBP1Q8IUX7 1158 aa24.46■■□□□ 1.51
TMEFF1-201ENST00000374879 RILPL2Q969X0 211 aa24.46■■□□□ 1.51
TMEFF1-201ENST00000374879 CBX8Q9HC52 389 aa24.46■■□□□ 1.51
TMEFF1-201ENST00000374879 CHMP3Q9Y3E7 222 aa24.46■■□□□ 1.51
TMEFF1-201ENST00000374879 NCKAP5LQ9HCH0 1330 aa24.45■■□□□ 1.51
TMEFF1-201ENST00000374879 RAD51AP2Q09MP3 1159 aa24.45■■□□□ 1.5
TMEFF1-201ENST00000374879 CCDC144BQ3MJ40 725 aa24.45■■□□□ 1.5
TMEFF1-201ENST00000374879 CCDC144CPQ8IYA2 1237 aa24.45■■□□□ 1.5
TMEFF1-201ENST00000374879 ATP6V1DQ9Y5K8 247 aa24.45■■□□□ 1.5
TMEFF1-201ENST00000374879 NPHP1O15259 732 aa24.45■■□□□ 1.5
TMEFF1-201ENST00000374879 IL17RAQ96F46 866 aa24.45■■□□□ 1.5
TMEFF1-201ENST00000374879 DIP2BQ9P265 1576 aa24.45■■□□□ 1.5
TMEFF1-201ENST00000374879 CDK12Q9NYV4 1490 aaPredicted RBP24.44■■□□□ 1.5
TMEFF1-201ENST00000374879 NUDT16Q96DE0 195 aaKnown RBP24.44■■□□□ 1.5
TMEFF1-201ENST00000374879 ERO1AQ96HE7 468 aa24.44■■□□□ 1.5
TMEFF1-201ENST00000374879 RRS1Q15050 365 aaKnown RBP24.44■■□□□ 1.5
TMEFF1-201ENST00000374879 GTF3C6Q969F1 213 aa24.44■■□□□ 1.5
TMEFF1-201ENST00000374879 ERBB3P21860 1342 aa24.43■■□□□ 1.5
TMEFF1-201ENST00000374879 MAP3K11Q16584 847 aa24.43■■□□□ 1.5
TMEFF1-201ENST00000374879 COG3Q96JB2 828 aa24.43■■□□□ 1.5
TMEFF1-201ENST00000374879 MSH6P52701 1360 aa24.43■■□□□ 1.5
TMEFF1-201ENST00000374879 SLFNL1Q499Z3 407 aa24.43■■□□□ 1.5
TMEFF1-201ENST00000374879 ANO6Q4KMQ2 910 aa24.43■■□□□ 1.5
TMEFF1-201ENST00000374879 ZBTB9Q96C00 473 aa24.43■■□□□ 1.5
TMEFF1-201ENST00000374879 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.42■■□□□ 1.5
TMEFF1-201ENST00000374879 CLIP2Q9UDT6 1046 aa24.42■■□□□ 1.5
TMEFF1-201ENST00000374879 NRXN3Q9Y4C0 1643 aa24.42■■□□□ 1.5
TMEFF1-201ENST00000374879 PTPN14Q15678 1187 aa24.42■■□□□ 1.5
TMEFF1-201ENST00000374879 CKAP2LQ8IYA6 745 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms