RNA–Protein interactions for RNA: ENST00000370214.8

ABCD3-202, Transcript of ATP binding cassette subfamily D member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD3, Length 3,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-202ENST00000370214 FAM227BQ96M60 508 aa8.88□□□□□ -0.99
ABCD3-202ENST00000370214 DNAJC2Q99543 621 aaKnown RBP8.88□□□□□ -0.99
ABCD3-202ENST00000370214 PRDM10Q9NQV6 1147 aa8.88□□□□□ -0.99
ABCD3-202ENST00000370214 MAP3K2Q9Y2U5 619 aa8.88□□□□□ -0.99
ABCD3-202ENST00000370214 ARHGEF40Q8TER5 1519 aa8.88□□□□□ -0.99
ABCD3-202ENST00000370214 IFIT2P09913 472 aaKnown RBP8.88□□□□□ -0.99
ABCD3-202ENST00000370214 CKAP2LQ8IYA6 745 aa8.88□□□□□ -0.99
ABCD3-202ENST00000370214 PUS7Q96PZ0 661 aaKnown RBP8.88□□□□□ -0.99
ABCD3-202ENST00000370214 CIZ1Q9ULV3 898 aaPredicted RBP8.88□□□□□ -0.99
ABCD3-202ENST00000370214 ZC3H13Q5T200 1668 aaKnown RBP8.88□□□□□ -0.99
ABCD3-202ENST00000370214 GNAI3P08754 354 aa8.88□□□□□ -0.99
ABCD3-202ENST00000370214 AK2P54819 239 aa8.88□□□□□ -0.99
ABCD3-202ENST00000370214 ERCC4Q92889 916 aaPredicted RBP8.88□□□□□ -0.99
ABCD3-202ENST00000370214 TLR7Q9NYK1 1049 aaKnown RBP8.88□□□□□ -0.99
ABCD3-202ENST00000370214 TAF6LQ9Y6J9 622 aa8.88□□□□□ -0.99
ABCD3-202ENST00000370214 ATP8B2P98198 1209 aa8.87□□□□□ -0.99
ABCD3-202ENST00000370214 DNM1Q05193 864 aaKnown RBP8.87□□□□□ -0.99
ABCD3-202ENST00000370214 CHST3Q7LGC8 479 aa8.87□□□□□ -0.99
ABCD3-202ENST00000370214 PIK3C2BO00750 1634 aa8.87□□□□□ -0.99
ABCD3-202ENST00000370214 ALKQ9UM73 1620 aa8.87□□□□□ -0.99
ABCD3-202ENST00000370214 GUCY1B3Q02153 619 aa8.87□□□□□ -0.99
ABCD3-202ENST00000370214 CCDC129Q6ZRS4 1044 aa8.87□□□□□ -0.99
ABCD3-202ENST00000370214 SMC3Q9UQE7 1217 aa8.87□□□□□ -0.99
ABCD3-202ENST00000370214 CFAP74Q9C0B2 1584 aa8.87□□□□□ -0.99
ABCD3-202ENST00000370214 HSP90AB3PQ58FF7 597 aa8.87□□□□□ -0.99
ABCD3-202ENST00000370214 NEUROD6Q96NK8 337 aa8.87□□□□□ -0.99
ABCD3-202ENST00000370214 EDC4Q6P2E9 1401 aaKnown RBP8.86□□□□□ -0.99
ABCD3-202ENST00000370214 USP32Q8NFA0 1604 aa8.86□□□□□ -0.99
ABCD3-202ENST00000370214 RIC3Q7Z5B4 369 aa8.86□□□□□ -0.99
ABCD3-202ENST00000370214 MYO5BQ9ULV0 1848 aa8.86□□□□□ -0.99
ABCD3-202ENST00000370214 HECW2Q9P2P5 1572 aa8.86□□□□□ -0.99
ABCD3-202ENST00000370214 HSP90B1P14625 803 aaKnown RBP8.85□□□□□ -0.99
ABCD3-202ENST00000370214 DNAAF4Q8WXU2 420 aa8.85□□□□□ -0.99
ABCD3-202ENST00000370214 CHMP4CQ96CF2 233 aa8.85□□□□□ -0.99
ABCD3-202ENST00000370214 SEC62Q99442 399 aaKnown RBP8.85□□□□□ -0.99
ABCD3-202ENST00000370214 FSD1Q9BTV5 496 aa8.85□□□□□ -0.99
ABCD3-202ENST00000370214 SETBP1Q9Y6X0 1596 aa8.85□□□□□ -0.99
ABCD3-202ENST00000370214 PTPRCP08575 1304 aa8.85□□□□□ -0.99
ABCD3-202ENST00000370214 C1orf141Q5JVX7 400 aa8.85□□□□□ -0.99
ABCD3-202ENST00000370214 ZSCAN30Q86W11 494 aa8.85□□□□□ -0.99
ABCD3-202ENST00000370214 DRC7Q8IY82 874 aa8.85□□□□□ -0.99
ABCD3-202ENST00000370214 MAP2P11137 1827 aaKnown RBP8.85□□□□□ -0.99
ABCD3-202ENST00000370214 PIK3R4Q99570 1358 aa8.85□□□□□ -0.99
ABCD3-202ENST00000370214 HAP1P54257 671 aaPredicted RBP8.85□□□□□ -0.99
ABCD3-202ENST00000370214 CCDC173Q0VFZ6 552 aa8.85□□□□□ -0.99
ABCD3-202ENST00000370214 CLASRPQ8N2M8 674 aaKnown RBP8.85□□□□□ -0.99
ABCD3-202ENST00000370214 A2ML1A8K2U0 1454 aa8.85□□□□□ -0.99
ABCD3-202ENST00000370214 ATP10DQ9P241 1426 aa8.84□□□□□ -0.99
ABCD3-202ENST00000370214 GJB2P29033 226 aa8.84□□□□□ -0.99
ABCD3-202ENST00000370214 ZFYVE9O95405 1425 aa8.84□□□□□ -0.99
ABCD3-202ENST00000370214 IGSF3O75054 1194 aa8.84□□□□□ -0.99
ABCD3-202ENST00000370214 SNX14Q9Y5W7 946 aa8.84□□□□□ -0.99
ABCD3-202ENST00000370214 PPLO60437 1756 aa8.84□□□□□ -0.99
ABCD3-202ENST00000370214 PTCH1Q13635 1447 aa8.84□□□□□ -0.99
ABCD3-202ENST00000370214 TNRQ92752 1358 aa8.84□□□□□ -0.99
ABCD3-202ENST00000370214 SYT1P21579 422 aa8.84□□□□□ -0.99
ABCD3-202ENST00000370214 NFATC2IPQ8NCF5 419 aa8.84□□□□□ -0.99
ABCD3-202ENST00000370214 ARHGEF28Q8N1W1 1705 aaKnown RBP8.83□□□□□ -1
ABCD3-202ENST00000370214 UQCRHLA0A096LP55 91 aa8.83□□□□□ -1
ABCD3-202ENST00000370214 GOLGA6L4A6NEF3 574 aa8.83□□□□□ -1
ABCD3-202ENST00000370214 UQCRHP07919 91 aa8.83□□□□□ -1
ABCD3-202ENST00000370214 DDX46Q7L014 1031 aaKnown RBP8.83□□□□□ -1
ABCD3-202ENST00000370214 MYD88Q99836 296 aa8.83□□□□□ -1
ABCD3-202ENST00000370214 TSPY26PQ9H489 355 aa8.83□□□□□ -1
ABCD3-202ENST00000370214 SNRKQ9NRH2 765 aa8.83□□□□□ -1
ABCD3-202ENST00000370214 PHF8Q9UPP1 1060 aa8.83□□□□□ -1
ABCD3-202ENST00000370214 G3BP1Q13283 466 aaKnown RBP eCLIP8.83□□□□□ -14e-6■□□□□ 9.4
ABCD3-202ENST00000370214 RUFY3Q7L099 469 aa8.83□□□□□ -1
ABCD3-202ENST00000370214 CNTROBQ8N137 903 aa8.83□□□□□ -1
ABCD3-202ENST00000370214 PDRG1Q9NUG6 133 aa8.83□□□□□ -1
ABCD3-202ENST00000370214 AXIN2Q9Y2T1 843 aa8.83□□□□□ -1
ABCD3-202ENST00000370214 NPHP1O15259 732 aa8.83□□□□□ -1
ABCD3-202ENST00000370214 BICC1Q9H694 974 aaKnown RBP8.83□□□□□ -1
ABCD3-202ENST00000370214 RAB11FIP3O75154 756 aa8.82□□□□□ -1
ABCD3-202ENST00000370214 CCT2P78371 535 aaKnown RBP8.82□□□□□ -1
ABCD3-202ENST00000370214 SYTL4Q96C24 671 aaPredicted RBP8.82□□□□□ -1
ABCD3-202ENST00000370214 DIP2CQ9Y2E4 1556 aa8.82□□□□□ -1
ABCD3-202ENST00000370214 BRPF1P55201 1214 aaPredicted RBP8.82□□□□□ -1
ABCD3-202ENST00000370214 LARP1BQ659C4 914 aaKnown RBP8.82□□□□□ -1
ABCD3-202ENST00000370214 LRSAM1Q6UWE0 723 aa8.82□□□□□ -1
ABCD3-202ENST00000370214 RIMBP3CA6NJZ7 1639 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 RIMBP3BA6NNM3 1639 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 RIMBP3Q9UFD9 1639 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 NMIQ13287 307 aaPredicted RBP8.81□□□□□ -1
ABCD3-202ENST00000370214 COPS6Q7L5N1 327 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 UBE3BQ7Z3V4 1068 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 ZNF592Q92610 1267 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 EAF2Q96CJ1 260 aaPredicted RBP8.81□□□□□ -1
ABCD3-202ENST00000370214 SUCLG2Q96I99 432 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 FTOQ9C0B1 505 aaKnown RBP eCLIP8.81□□□□□ -1
ABCD3-202ENST00000370214 CWC22Q9HCG8 908 aaKnown RBP8.81□□□□□ -1
ABCD3-202ENST00000370214 RGS12O14924 1447 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 CPSF1Q10570 1443 aaKnown RBP8.81□□□□□ -1
ABCD3-202ENST00000370214 STX6O43752 255 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 ADCY5O95622 1261 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 ISM2Q6H9L7 571 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 KIF1BPQ96EK5 621 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 KAT6BQ8WYB5 2073 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 FLT4P35916 1363 aa8.81□□□□□ -1
ABCD3-202ENST00000370214 A0A0G2JLW4 131 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 725.5 ms