RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 IRS2Q9Y4H2 1338 aa9.03□□□□□ -0.96
CSDE1-204ENST00000369530 SSFA2P28290 1259 aa9.03□□□□□ -0.96
CSDE1-204ENST00000369530 COL15A1P39059 1388 aa9.03□□□□□ -0.96
CSDE1-204ENST00000369530 EIF5P55010 431 aaKnown RBP9.03□□□□□ -0.96
CSDE1-204ENST00000369530 AAMPQ13685 434 aa9.03□□□□□ -0.96
CSDE1-204ENST00000369530 ZBTB22O15209 634 aa9.02□□□□□ -0.96
CSDE1-204ENST00000369530 RTL5Q5HYW3 569 aaPredicted RBP9.02□□□□□ -0.96
CSDE1-204ENST00000369530 PPP4R2Q9NY27 417 aa9.02□□□□□ -0.96
CSDE1-204ENST00000369530 USP42Q9H9J4 1324 aaKnown RBP9.02□□□□□ -0.97
CSDE1-204ENST00000369530 CARMIL3Q8ND23 1372 aa9.02□□□□□ -0.97
CSDE1-204ENST00000369530 PRELPP51888 382 aa9.01□□□□□ -0.97
CSDE1-204ENST00000369530 SLC16A10Q8TF71 515 aa9.01□□□□□ -0.97
CSDE1-204ENST00000369530 MAST2Q6P0Q8 1798 aa9.01□□□□□ -0.97
CSDE1-204ENST00000369530 TRPM7Q96QT4 1865 aa9.01□□□□□ -0.97
CSDE1-204ENST00000369530 SIPA1L1O43166 1804 aa9.01□□□□□ -0.97
CSDE1-204ENST00000369530 PHIPQ8WWQ0 1821 aa9.01□□□□□ -0.97
CSDE1-204ENST00000369530 CHL1O00533 1208 aa9.01□□□□□ -0.97
CSDE1-204ENST00000369530 RRP9O43818 475 aaKnown RBP9.01□□□□□ -0.97
CSDE1-204ENST00000369530 OTOFQ9HC10 1997 aa9.01□□□□□ -0.97
CSDE1-204ENST00000369530 NBPF26B4DH59 902 aa9□□□□□ -0.97
CSDE1-204ENST00000369530 ADRA2BP18089 450 aa9□□□□□ -0.97
CSDE1-204ENST00000369530 NBPF14Q5TI25 921 aa9□□□□□ -0.97
CSDE1-204ENST00000369530 NBPF10Q6P3W6 841 aaKnown RBP9□□□□□ -0.97
CSDE1-204ENST00000369530 NBPF15Q8N660 670 aa9□□□□□ -0.97
CSDE1-204ENST00000369530 ANP32CO43423 234 aa9□□□□□ -0.97
CSDE1-204ENST00000369530 DIAPH1O60610 1272 aaKnown RBP9□□□□□ -0.97
CSDE1-204ENST00000369530 APBA3O96018 575 aa9□□□□□ -0.97
CSDE1-204ENST00000369530 TATP17735 454 aaPredicted RBP9□□□□□ -0.97
CSDE1-204ENST00000369530 BAG6P46379 1132 aa9□□□□□ -0.97
CSDE1-204ENST00000369530 LOC102724428A0A0B4J2F2 783 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 GYS1P13807 737 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 SIK1P57059 783 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 SULT6B1Q6IMI4 303 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 C7orf43Q8WVR3 580 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 SPG7Q9UQ90 795 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 MORC1Q86VD1 984 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 MTFR1LQ9H019 292 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 KNSTRNQ9Y448 316 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 MYH13Q9UKX3 1938 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 AMPHP49418 695 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 EVA1CP58658 441 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 LOC285556D6RIA3 1793 aa8.99□□□□□ -0.97
CSDE1-204ENST00000369530 POLRMTO00411 1230 aaKnown RBP8.98□□□□□ -0.97
CSDE1-204ENST00000369530 EIF4A1P60842 406 aaKnown RBP8.98□□□□□ -0.97
CSDE1-204ENST00000369530 AKAP11Q9UKA4 1901 aa8.98□□□□□ -0.97
CSDE1-204ENST00000369530 CAMTA2O94983 1202 aa8.98□□□□□ -0.97
CSDE1-204ENST00000369530 KCNQ3O43525 872 aa8.97□□□□□ -0.97
CSDE1-204ENST00000369530 DDR1Q08345 913 aa8.97□□□□□ -0.97
CSDE1-204ENST00000369530 NLRP2Q9NX02 1062 aa8.97□□□□□ -0.97
CSDE1-204ENST00000369530 RPS6KA4O75676 772 aa8.97□□□□□ -0.97
CSDE1-204ENST00000369530 IL16Q14005 1332 aa8.97□□□□□ -0.97
CSDE1-204ENST00000369530 NBR1Q14596 966 aa8.96□□□□□ -0.97
CSDE1-204ENST00000369530 NFE2L2Q16236 605 aa8.96□□□□□ -0.97
CSDE1-204ENST00000369530 RBBP6Q7Z6E9 1792 aaKnown RBP8.96□□□□□ -0.97
CSDE1-204ENST00000369530 HSP90AB1P08238 724 aaKnown RBP8.96□□□□□ -0.98
CSDE1-204ENST00000369530 BRPF1P55201 1214 aaPredicted RBP8.96□□□□□ -0.98
CSDE1-204ENST00000369530 ERBB4Q15303 1308 aa8.96□□□□□ -0.98
CSDE1-204ENST00000369530 ZNF790Q6PG37 636 aa8.96□□□□□ -0.98
CSDE1-204ENST00000369530 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.98
CSDE1-204ENST00000369530 CRY2Q49AN0 593 aa8.95□□□□□ -0.98
CSDE1-204ENST00000369530 PRAMEF22A3QJZ6 481 aa8.95□□□□□ -0.98
CSDE1-204ENST00000369530 PDE4CQ08493 712 aa8.95□□□□□ -0.98
CSDE1-204ENST00000369530 PDE3BQ13370 1112 aa8.95□□□□□ -0.98
CSDE1-204ENST00000369530 GIGYF1O75420 1035 aaPredicted RBP8.95□□□□□ -0.98
CSDE1-204ENST00000369530 PLEKHO1Q53GL0 409 aaPredicted RBP8.95□□□□□ -0.98
CSDE1-204ENST00000369530 NFATC2IPQ8NCF5 419 aa8.95□□□□□ -0.98
CSDE1-204ENST00000369530 GNAT3A8MTJ3 354 aa8.94□□□□□ -0.98
CSDE1-204ENST00000369530 SMARCC1Q92922 1105 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-204ENST00000369530 HOXB7P09629 217 aa8.94□□□□□ -0.98
CSDE1-204ENST00000369530 CASP7P55210 303 aa8.94□□□□□ -0.98
CSDE1-204ENST00000369530 R3HDM1Q15032 1099 aaKnown RBP8.94□□□□□ -0.98
CSDE1-204ENST00000369530 ACSBG1Q96GR2 724 aa8.94□□□□□ -0.98
CSDE1-204ENST00000369530 PARP14Q460N5 1801 aa8.94□□□□□ -0.98
CSDE1-204ENST00000369530 PDIA4P13667 645 aaKnown RBP8.93□□□□□ -0.98
CSDE1-204ENST00000369530 TMPOP42166 694 aaKnown RBP8.93□□□□□ -0.98
CSDE1-204ENST00000369530 CEP350Q5VT06 3117 aa8.93□□□□□ -0.98
CSDE1-204ENST00000369530 PPM1GO15355 546 aaPredicted RBP8.93□□□□□ -0.98
CSDE1-204ENST00000369530 RBM10P98175 930 aaKnown RBP8.93□□□□□ -0.98
CSDE1-204ENST00000369530 CC2D1BQ5T0F9 858 aaKnown RBP8.93□□□□□ -0.98
CSDE1-204ENST00000369530 ARHGEF1Q92888 912 aaKnown RBP8.93□□□□□ -0.98
CSDE1-204ENST00000369530 MYO5AQ9Y4I1 1855 aaKnown RBP8.93□□□□□ -0.98
CSDE1-204ENST00000369530 YBX3P16989 372 aaKnown RBP eCLIP8.93□□□□□ -0.989e-10■■□□□ 13.4
CSDE1-204ENST00000369530 LMOD2Q6P5Q4 547 aa8.93□□□□□ -0.98
CSDE1-204ENST00000369530 ZNF496Q96IT1 587 aaPredicted RBP8.93□□□□□ -0.98
CSDE1-204ENST00000369530 PRKAR2BP31323 418 aa8.92□□□□□ -0.98
CSDE1-204ENST00000369530 CRKLP46109 303 aaKnown RBP8.92□□□□□ -0.98
CSDE1-204ENST00000369530 SPINK5Q9NQ38 1064 aaPredicted RBP8.92□□□□□ -0.98
CSDE1-204ENST00000369530 ADAMTS8Q9UP79 889 aa8.92□□□□□ -0.98
CSDE1-204ENST00000369530 CD2APQ9Y5K6 639 aa8.92□□□□□ -0.98
CSDE1-204ENST00000369530 RTL9Q8NET4 1388 aa8.92□□□□□ -0.98
CSDE1-204ENST00000369530 UBN2Q6ZU65 1347 aa8.92□□□□□ -0.98
CSDE1-204ENST00000369530 PCNTO95613 3336 aa8.92□□□□□ -0.98
CSDE1-204ENST00000369530 HTTP42858 3142 aa8.92□□□□□ -0.98
CSDE1-204ENST00000369530 GREB1LQ9C091 1923 aaPredicted RBP8.92□□□□□ -0.98
CSDE1-204ENST00000369530 GSE1Q14687 1217 aa8.92□□□□□ -0.98
CSDE1-204ENST00000369530 ZNF34Q8IZ26 560 aa8.92□□□□□ -0.98
CSDE1-204ENST00000369530 UTYO14607 1347 aa8.91□□□□□ -0.98
CSDE1-204ENST00000369530 LTBP3Q9NS15 1303 aa8.91□□□□□ -0.98
CSDE1-204ENST00000369530 IL6STP40189 918 aaPredicted RBP8.91□□□□□ -0.98
CSDE1-204ENST00000369530 GAS2L2Q8NHY3 880 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms