RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 SDSP20132 328 aa18.78■□□□□ 0.6
ARHGEF28-201ENST00000296794 U3KPZ7 1027 aaPredicted RBP18.78■□□□□ 0.6
ARHGEF28-201ENST00000296794 MCM5P33992 734 aa18.78■□□□□ 0.6
ARHGEF28-201ENST00000296794 IFNL2Q8IZJ0 200 aa18.78■□□□□ 0.6
ARHGEF28-201ENST00000296794 ANO10Q9NW15 660 aa18.78■□□□□ 0.6
ARHGEF28-201ENST00000296794 SFPQP23246 707 aaKnown RBP eCLIP18.77■□□□□ 0.6
ARHGEF28-201ENST00000296794 ABCF2Q9UG63 623 aa18.77■□□□□ 0.6
ARHGEF28-201ENST00000296794 PLCH2O75038 1416 aa18.77■□□□□ 0.6
ARHGEF28-201ENST00000296794 TDO2P48775 406 aa18.77■□□□□ 0.6
ARHGEF28-201ENST00000296794 TCOF1Q13428 1488 aaKnown RBP18.77■□□□□ 0.6
ARHGEF28-201ENST00000296794 ACEP12821 1306 aa18.77■□□□□ 0.6
ARHGEF28-201ENST00000296794 H0YHG0 523 aa18.77■□□□□ 0.6
ARHGEF28-201ENST00000296794 IFIT1P09914 478 aaKnown RBP18.77■□□□□ 0.6
ARHGEF28-201ENST00000296794 ERLIN1O75477 346 aa18.77■□□□□ 0.59
ARHGEF28-201ENST00000296794 IDH1O75874 414 aaKnown RBP18.77■□□□□ 0.59
ARHGEF28-201ENST00000296794 ADCY5O95622 1261 aa18.77■□□□□ 0.59
ARHGEF28-201ENST00000296794 GJB2P29033 226 aa18.77■□□□□ 0.59
ARHGEF28-201ENST00000296794 UBXN4Q92575 508 aa18.77■□□□□ 0.59
ARHGEF28-201ENST00000296794 SNX21Q969T3 373 aa18.77■□□□□ 0.59
ARHGEF28-201ENST00000296794 TMX3Q96JJ7 454 aa18.77■□□□□ 0.59
ARHGEF28-201ENST00000296794 CLIP2Q9UDT6 1046 aa18.77■□□□□ 0.59
ARHGEF28-201ENST00000296794 AKAP2Q9Y2D5 859 aa18.77■□□□□ 0.59
ARHGEF28-201ENST00000296794 CLCN1P35523 988 aa18.77■□□□□ 0.59
ARHGEF28-201ENST00000296794 PDCL3Q9H2J4 239 aa18.77■□□□□ 0.59
ARHGEF28-201ENST00000296794 FBLN1P23142 703 aa18.76■□□□□ 0.59
ARHGEF28-201ENST00000296794 TEX13AQ9BXU3 409 aaPredicted RBP18.76■□□□□ 0.59
ARHGEF28-201ENST00000296794 NOL7Q9UMY1 257 aaKnown RBP18.76■□□□□ 0.59
ARHGEF28-201ENST00000296794 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
ARHGEF28-201ENST00000296794 POLR3AO14802 1390 aaPredicted RBP18.76■□□□□ 0.59
ARHGEF28-201ENST00000296794 CT47A1Q5JQC4 288 aaPredicted RBP18.76■□□□□ 0.59
ARHGEF28-201ENST00000296794 KDM5BQ9UGL1 1544 aa18.76■□□□□ 0.59
ARHGEF28-201ENST00000296794 UHRF1BP1LA0JNW5 1464 aa18.76■□□□□ 0.59
ARHGEF28-201ENST00000296794 STIM1Q13586 685 aa18.76■□□□□ 0.59
ARHGEF28-201ENST00000296794 KIF2AO00139 706 aaPredicted RBP18.76■□□□□ 0.59
ARHGEF28-201ENST00000296794 SEC24BO95487 1268 aa18.75■□□□□ 0.59
ARHGEF28-201ENST00000296794 DBF4Q9UBU7 674 aaPredicted RBP18.75■□□□□ 0.59
ARHGEF28-201ENST00000296794 CBX1P83916 185 aa18.75■□□□□ 0.59
ARHGEF28-201ENST00000296794 CAVIN4Q5BKX8 364 aa18.75■□□□□ 0.59
ARHGEF28-201ENST00000296794 ECHDC1Q9NTX5 307 aa18.75■□□□□ 0.59
ARHGEF28-201ENST00000296794 PRKCSHP14314 528 aaPredicted RBP18.75■□□□□ 0.59
ARHGEF28-201ENST00000296794 LRSAM1Q6UWE0 723 aa18.75■□□□□ 0.59
ARHGEF28-201ENST00000296794 MEIS3Q99687 375 aa18.75■□□□□ 0.59
ARHGEF28-201ENST00000296794 UBAC1Q9BSL1 405 aa18.75■□□□□ 0.59
ARHGEF28-201ENST00000296794 DDX19AQ9NUU7 478 aaKnown RBP18.75■□□□□ 0.59
ARHGEF28-201ENST00000296794 TRMT112Q9UI30 125 aaKnown RBP18.75■□□□□ 0.59
ARHGEF28-201ENST00000296794 MYD88Q99836 296 aa18.74■□□□□ 0.59
ARHGEF28-201ENST00000296794 GUCY1B3Q02153 619 aa18.74■□□□□ 0.59
ARHGEF28-201ENST00000296794 SOGA3Q5TF21 947 aa18.74■□□□□ 0.59
ARHGEF28-201ENST00000296794 TFIP11Q9UBB9 837 aaKnown RBP18.74■□□□□ 0.59
ARHGEF28-201ENST00000296794 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
ARHGEF28-201ENST00000296794 PRDM10Q9NQV6 1147 aa18.74■□□□□ 0.59
ARHGEF28-201ENST00000296794 PER1O15534 1290 aaPredicted RBP18.74■□□□□ 0.59
ARHGEF28-201ENST00000296794 EVI5LQ96CN4 794 aa18.74■□□□□ 0.59
ARHGEF28-201ENST00000296794 UBE2HP62256 183 aa18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 CHRNA2Q15822 529 aa18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 KIF18AQ8NI77 898 aa18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 EIF3JO75822 258 aaKnown RBP18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 IFIT5Q13325 482 aaKnown RBP18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 PPP1R42Q7Z4L9 355 aa18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 WASF1Q92558 559 aa18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 HYPKQ9NX55 129 aa18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 ATP10BO94823 1461 aa18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 SKIDA1Q1XH10 827 aa18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 TMEM132AQ24JP5 1023 aa18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 MRPL50Q8N5N7 158 aaKnown RBP18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 C16orf45Q96MC5 204 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF28-201ENST00000296794 NUP153P49790 1475 aaKnown RBP18.72■□□□□ 0.59
ARHGEF28-201ENST00000296794 TNNT1P13805 278 aa18.72■□□□□ 0.59
ARHGEF28-201ENST00000296794 ANKRD24Q8TF21 1146 aa18.72■□□□□ 0.59
ARHGEF28-201ENST00000296794 AIDAQ96BJ3 306 aa18.72■□□□□ 0.59
ARHGEF28-201ENST00000296794 DEF6Q9H4E7 631 aa18.72■□□□□ 0.59
ARHGEF28-201ENST00000296794 RAPGEF6Q8TEU7 1601 aa18.72■□□□□ 0.59
ARHGEF28-201ENST00000296794 HMGB1P09429 215 aaKnown RBP18.72■□□□□ 0.59
ARHGEF28-201ENST00000296794 ANKRD44Q8N8A2 993 aa18.72■□□□□ 0.59
ARHGEF28-201ENST00000296794 C8orf76Q96K31 380 aa18.72■□□□□ 0.59
ARHGEF28-201ENST00000296794 PIK3C2GO75747 1445 aa18.72■□□□□ 0.59
ARHGEF28-201ENST00000296794 CTAGE5O15320 804 aa18.72■□□□□ 0.59
ARHGEF28-201ENST00000296794 UVSSAQ2YD98 709 aa18.72■□□□□ 0.59
ARHGEF28-201ENST00000296794 CFAP43Q8NDM7 1665 aa18.71■□□□□ 0.59
ARHGEF28-201ENST00000296794 HCLS1P14317 486 aaPredicted RBP18.71■□□□□ 0.59
ARHGEF28-201ENST00000296794 WWC2Q6AWC2 1192 aa18.71■□□□□ 0.59
ARHGEF28-201ENST00000296794 PDE1AP54750 535 aa18.71■□□□□ 0.59
ARHGEF28-201ENST00000296794 ANKIB1Q9P2G1 1089 aa18.71■□□□□ 0.59
ARHGEF28-201ENST00000296794 A2MP01023 1474 aa18.71■□□□□ 0.58
ARHGEF28-201ENST00000296794 ERICH4A6NGS2 130 aa18.7■□□□□ 0.58
ARHGEF28-201ENST00000296794 KRT18P05783 430 aaKnown RBP18.7■□□□□ 0.58
ARHGEF28-201ENST00000296794 ARHGAP29Q52LW3 1261 aa18.7■□□□□ 0.58
ARHGEF28-201ENST00000296794 TMCO3Q6UWJ1 677 aa18.7■□□□□ 0.58
ARHGEF28-201ENST00000296794 EPB41L2O43491 1005 aaKnown RBP18.7■□□□□ 0.58
ARHGEF28-201ENST00000296794 ZNF287Q9HBT7 754 aa18.7■□□□□ 0.58
ARHGEF28-201ENST00000296794 CCDC181Q5TID7 509 aa18.7■□□□□ 0.58
ARHGEF28-201ENST00000296794 C8orf58Q8NAV2 365 aa18.7■□□□□ 0.58
ARHGEF28-201ENST00000296794 RPGRQ92834 1020 aaKnown RBP18.69■□□□□ 0.58
ARHGEF28-201ENST00000296794 SMC5Q8IY18 1101 aa18.69■□□□□ 0.58
ARHGEF28-201ENST00000296794 ZSCAN22P10073 491 aaPredicted RBP18.69■□□□□ 0.58
ARHGEF28-201ENST00000296794 HSP90AB2PQ58FF8 381 aa18.69■□□□□ 0.58
ARHGEF28-201ENST00000296794 C16orf71Q8IYS4 520 aaPredicted RBP18.69■□□□□ 0.58
ARHGEF28-201ENST00000296794 FSIP1Q8NA03 581 aa18.69■□□□□ 0.58
ARHGEF28-201ENST00000296794 RAB3GAP1Q15042 981 aa18.69■□□□□ 0.58
ARHGEF28-201ENST00000296794 TRMT1Q9NXH9 659 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms