RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Exoc5Q3TPX4 708 aa19.45■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Ccdc27Q3V036 639 aa19.45■□□□□ 0.7
Ubp1-206ENSMUST00000216558 4930567H17RikQ3V0K5 233 aa19.45■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Ccnl1Q52KE7 532 aaKnown RBP19.45■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Mphosph10Q810V0 681 aaKnown RBP19.45■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Ppm1mQ8BU27 406 aa19.45■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Trim52Q8CDV4 233 aa19.45■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Eif3aP23116 1344 aaKnown RBP19.45■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Ddx60E9PZQ1 1711 aa19.45■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Ppp1r42Q8R1Z4 357 aa19.44■□□□□ 0.7
Ubp1-206ENSMUST00000216558 ApobrQ8VBT6 942 aa19.44■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Mylk2Q8VCR8 613 aa19.44■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Bicc1Q99MQ1 977 aaKnown RBP19.44■□□□□ 0.7
Ubp1-206ENSMUST00000216558 KnstrnQ9D9Z1 312 aaKnown RBP19.44■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Cfdp1O88271 295 aaKnown RBP19.43■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Ankle2Q6P1H6 964 aa19.43■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Srgap3Q812A2 1099 aa19.43■□□□□ 0.7
Ubp1-206ENSMUST00000216558 FanclQ9CR14 375 aa19.43■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Nwd2Q6P5U7 1742 aa19.43■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Mmp8O70138 465 aa19.43■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Ipo8Q7TMY7 1010 aa19.43■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Ak7Q9D2H2 614 aa19.43■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Ttll7A4Q9F0 912 aa19.42■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Wdr63B2RY71 923 aa19.42■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Mum1Q6DID5 682 aa19.42■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Nphp1Q9QY53 687 aa19.42■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Slc39a6Q8C145 765 aa19.41■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Psrc1Q9D0P7 329 aa19.41■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Cwc27Q3TKY6 469 aa19.4■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Ggt6Q6PDE7 497 aa19.4■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Atg4a-psA0A0G2JFS9 396 aa19.4■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Ier5O89113 308 aa19.4■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Hoxa7P02830 229 aa19.4■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Atg4aQ8C9S8 396 aa19.4■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Hdac6Q9Z2V5 1149 aa19.4■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Nav1Q8CH77 1875 aa19.39■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Emilin2Q8K482 1074 aa19.39■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Cog6Q8R3I3 657 aa19.39■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Ipo9Q91YE6 1041 aa19.39■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Mcmdc2E9Q956 681 aa19.38■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Cap2Q9CYT6 476 aa19.38■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Col4a1P02463 1669 aa19.37■□□□□ 0.69
Ubp1-206ENSMUST00000216558 MypnQ5DTJ9 1315 aa19.37■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Grm8P47743 908 aa19.37■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Ddb1Q3U1J4 1140 aaKnown RBP19.37■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Smg7Q5RJH6 1138 aaKnown RBP19.37■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Tnrc6cQ3UHC0 1690 aaKnown RBP19.37■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Tlr7P58681 1050 aa19.36■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Map3k13Q1HKZ5 959 aa19.36■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Gm12185Q5NCB2 835 aa19.36■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Tceal9Q9DD24 104 aa19.36■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Kndc1Q0KK55 1742 aa19.36■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Zbtb40Q6PCS8 1258 aa19.36■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Smarca5Q91ZW3 1051 aaKnown RBP19.36■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Lmbr1lQ9D1E5 489 aa19.36■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Ddx58Q6Q899 926 aa19.35■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Ccdc146E9Q9F7 977 aa19.34■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Sf3b2Q3UJB0 878 aaKnown RBP19.34■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Dcaf5Q80T85 946 aa19.34■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Nhsl1Q8CAF4 1587 aa19.34■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Sipa1l3G3X9J0 1776 aa19.34■□□□□ 0.69
Ubp1-206ENSMUST00000216558 InhbeO08717 350 aa19.33■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Tbc1d32Q3URV1 1296 aa19.33■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Ripor2Q80U16 1078 aa19.33■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Jmjd4Q8BFT6 427 aa19.33■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Cyp46a1Q9WVK8 500 aa19.33■□□□□ 0.69
Ubp1-206ENSMUST00000216558 Ank1Q02357 1862 aa19.32■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Syde2E9PUP1 1314 aa19.32■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Pde4dQ01063 747 aa19.32■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Tgfb1i1Q62219 461 aa19.32■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Hspa2P17156 633 aa19.31■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Cntnap1O54991 1385 aa19.31■□□□□ 0.68
Ubp1-206ENSMUST00000216558 VgfQ0VGU4 617 aa19.3■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Gigyf1Q99MR1 1044 aaKnown RBP19.3■□□□□ 0.68
Ubp1-206ENSMUST00000216558 CenppQ9CZ92 286 aa19.3■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Sema6bO54951 886 aa19.29■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Kiaa0232Q80U59 1396 aaKnown RBP19.29■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Ppm1gQ61074 542 aa19.29■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Fkbp5Q64378 456 aa19.29■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Nlrp9bQ66X22 1003 aa19.29■□□□□ 0.68
Ubp1-206ENSMUST00000216558 AbraQ8BUZ1 375 aa19.29■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Eno4Q8C042 619 aa19.29■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Sos2Q02384 1333 aa19.28■□□□□ 0.68
Ubp1-206ENSMUST00000216558 MetP16056 1379 aa19.28■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Hsp90ab1P11499 724 aaKnown RBP19.28■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Nkx1-2P42580 305 aa19.28■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Slc4a10Q5DTL9 1118 aa19.28■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Mrc1Q61830 1456 aa19.28■□□□□ 0.68
Ubp1-206ENSMUST00000216558 AK157302I3ITR1 129 aa19.27■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Cct4P80315 539 aaKnown RBP19.27■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Gnl3lQ6PGG6 577 aaKnown RBP19.27■□□□□ 0.68
Ubp1-206ENSMUST00000216558 MypopQ8R4U1 393 aa19.27■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Isca1Q9D924 129 aa19.27■□□□□ 0.68
Ubp1-206ENSMUST00000216558 Anapc15-psA0A140T8L6 141 aa19.26■□□□□ 0.67
Ubp1-206ENSMUST00000216558 Ehd4Q9EQP2 541 aa19.26■□□□□ 0.67
Ubp1-206ENSMUST00000216558 Abcc4E9Q236 1325 aa19.26■□□□□ 0.67
Ubp1-206ENSMUST00000216558 Ltbp1Q8CG19 1712 aa19.26■□□□□ 0.67
Ubp1-206ENSMUST00000216558 Tbc1d9Q3UYK3 1264 aa19.25■□□□□ 0.67
Ubp1-206ENSMUST00000216558 Clcn1Q64347 994 aa19.25■□□□□ 0.67
Ubp1-206ENSMUST00000216558 Soga3Q6NZL0 945 aa19.25■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms