RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 EspnQ9ET47 871 aa26.59■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Prkab2Q6PAM0 271 aa26.59■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Cap2Q9CYT6 476 aa26.58■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Adcy9P51830 1353 aa26.57■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Ccdc6D3YZP9 469 aa26.56■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 AU019823E9PUQ3 292 aa26.56■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Irf9Q61179 399 aa26.56■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 B4galnt3Q6L8S8 986 aa26.56■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Prkar2bP31324 416 aa26.56■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Tm6sf1P58749 370 aa26.55■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Vars2Q3U2A8 1060 aa26.55■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Jmjd4Q8BFT6 427 aa26.55■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 HnrnpuQ8VEK3 800 aaKnown RBP26.55■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Dbr1Q923B1 550 aa26.55■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Dcaf5Q80T85 946 aa26.54■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Kiaa0319lQ8K135 1048 aa26.54■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Triml2E9PW10 424 aa26.53■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Smg7Q5RJH6 1138 aaKnown RBP26.53■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Adamtsl1Q8BLI0 1745 aa26.53■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Nav1Q8CH77 1875 aa26.52■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Cers3Q1A3B0 383 aa26.52■■□□□ 1.84
Ccdc88a-202ENSMUST00000109477 Exoc6bA6H5Z3 810 aa26.51■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Map3k2Q61083 619 aa26.51■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Erbb4Q61527 1308 aa26.51■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Stk36Q69ZM6 1316 aa26.51■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Gnai2P08752 355 aaKnown RBP26.51■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Bend3Q6PAL0 825 aa26.51■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Wwc1Q5SXA9 1104 aa26.5■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Slc39a6Q8C145 765 aa26.49■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Mylk2Q8VCR8 613 aa26.49■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 SkilQ60665 675 aa26.48■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Mphosph10Q810V0 681 aaKnown RBP26.48■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Snapc4Q8BP86 1333 aa26.48■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Trim27Q62158 513 aa26.48■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Ddx60E9PZQ1 1711 aa26.47■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Igfbp6P47880 238 aa26.47■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 HellsQ60848 821 aa26.47■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Trim52Q8CDV4 233 aa26.47■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Zap70P43404 618 aa26.46■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Ankle2Q6P1H6 964 aa26.45■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Liat1Q810M6 228 aa26.45■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Bicc1Q99MQ1 977 aaKnown RBP26.45■■□□□ 1.83
Ccdc88a-202ENSMUST00000109477 Fam13aQ8BGI4 693 aa26.45■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Ttll7A4Q9F0 912 aa26.44■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Cfdp1O88271 295 aaKnown RBP26.44■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Pim2Q62070 370 aa26.44■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Eif3aP23116 1344 aaKnown RBP26.44■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Col4a1P02463 1669 aa26.43■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Bicdl1A0JNT9 577 aa26.43■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Q8BT18 775 aa26.43■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Kndc1Q0KK55 1742 aa26.43■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 ScaperF8VQ70 1398 aaKnown RBP26.43■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Pde4dQ01063 747 aa26.42■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Gm12185Q5NCB2 835 aa26.42■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Ankrd13dQ6PD24 605 aa26.42■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Ppm1mQ8BU27 406 aa26.41■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 LifrP42703 1092 aa26.39■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Sart3Q9JLI8 962 aaKnown RBP26.39■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Syde2E9PUP1 1314 aa26.39■■□□□ 1.82
Ccdc88a-202ENSMUST00000109477 Apba2P98084 750 aa26.39■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Ric1Q69ZJ7 1422 aa26.39■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 CarsQ9ER72 831 aaKnown RBP26.39■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Eif4g2Q62448 906 aaKnown RBP26.38■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Atp8b2P98199 1209 aa26.37■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Clcn1Q64347 994 aa26.37■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Miga2Q8BK03 593 aa26.37■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Sipa1l3G3X9J0 1776 aa26.37■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Ppp2r3aB2RXC8 1150 aa26.36■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Map3k13Q1HKZ5 959 aa26.36■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Cetn4Q8K4K1 168 aa26.36■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Mum1Q6DID5 682 aa26.36■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Srgap3Q812A2 1099 aa26.36■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Ppp1r42Q8R1Z4 357 aa26.36■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 MypnQ5DTJ9 1315 aa26.35■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 CoblQ5NBX1 1337 aaKnown RBP26.35■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Hmgb2P30681 210 aaKnown RBP26.35■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Zbtb40Q6PCS8 1258 aa26.35■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Cgnl1Q6AW69 1298 aa26.34■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Ddx58Q6Q899 926 aa26.34■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Brd1E9PZ26 1189 aaKnown RBP26.34■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Hspa2P17156 633 aa26.34■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 DiexfQ8BTT6 772 aaKnown RBP26.34■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Map7O88735 730 aa26.33■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Grm8P47743 908 aa26.33■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Smarcc1P97496 1104 aa26.33■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Cwc27Q3TKY6 469 aa26.33■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Aldh8a1Q8BH00 487 aa26.33■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Gigyf1Q99MR1 1044 aaKnown RBP26.33■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 Lmbr1lQ9D1E5 489 aa26.33■■□□□ 1.81
Ccdc88a-202ENSMUST00000109477 MetP16056 1379 aa26.33■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Gm13023A2A8N2 498 aa26.32■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Tceal9Q9DD24 104 aa26.31■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Nphp1Q9QY53 687 aa26.31■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Ank1Q02357 1862 aa26.31■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Ier5O89113 308 aa26.3■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Tlr7P58681 1050 aa26.3■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Phlpp2Q8BXA7 1320 aa26.29■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Mmp8O70138 465 aa26.29■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Gcc1Q9D4H2 778 aa26.29■■□□□ 1.8
Ccdc88a-202ENSMUST00000109477 Ccdc27Q3V036 639 aa26.28■■□□□ 1.8
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms