RNA–Protein interactions for RNA: ENSMUST00000037011.4

Trim36-201, Transcript of E3 ubiquitin-protein ligase Trim36, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim36, Length 4,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36-201ENSMUST00000037011 BcanQ61361 883 aa11.1□□□□□ -0.63
Trim36-201ENSMUST00000037011 Ddx19aQ61655 478 aaKnown RBP11.1□□□□□ -0.63
Trim36-201ENSMUST00000037011 Ddx58Q6Q899 926 aa11.1□□□□□ -0.63
Trim36-201ENSMUST00000037011 CrebrfQ8CDG5 640 aaKnown RBP11.1□□□□□ -0.63
Trim36-201ENSMUST00000037011 Ythdc1E9Q5K9 736 aaKnown RBP11.1□□□□□ -0.63
Trim36-201ENSMUST00000037011 Dnajc5gQ8C632 165 aa11.1□□□□□ -0.63
Trim36-201ENSMUST00000037011 Atg3Q9CPX6 314 aa11.1□□□□□ -0.63
Trim36-201ENSMUST00000037011 Soga3Q6NZL0 945 aa11.09□□□□□ -0.63
Trim36-201ENSMUST00000037011 Pof1bQ8K4L4 587 aa11.09□□□□□ -0.63
Trim36-201ENSMUST00000037011 Ankle2Q6P1H6 964 aa11.09□□□□□ -0.63
Trim36-201ENSMUST00000037011 Rnf214Q8BFU3 668 aaKnown RBP11.09□□□□□ -0.63
Trim36-201ENSMUST00000037011 ImpactO55091 318 aa11.08□□□□□ -0.63
Trim36-201ENSMUST00000037011 NaspQ99MD9 773 aaKnown RBP11.08□□□□□ -0.63
Trim36-201ENSMUST00000037011 Lmbr1lQ9D1E5 489 aa11.08□□□□□ -0.63
Trim36-201ENSMUST00000037011 IghaA0A0A6YXW6 389 aa11.08□□□□□ -0.64
Trim36-201ENSMUST00000037011 Becn1O88597 448 aa11.08□□□□□ -0.64
Trim36-201ENSMUST00000037011 Cpa2Q504N0 417 aa11.08□□□□□ -0.64
Trim36-201ENSMUST00000037011 Zc3h13E9Q784 1729 aaKnown RBP11.08□□□□□ -0.64
Trim36-201ENSMUST00000037011 Sipa1l1Q8C0T5 1782 aa11.08□□□□□ -0.64
Trim36-201ENSMUST00000037011 CrklP47941 303 aa11.08□□□□□ -0.64
Trim36-201ENSMUST00000037011 Kcna6Q61923 529 aa11.08□□□□□ -0.64
Trim36-201ENSMUST00000037011 Tmem87bQ8BKU8 555 aa11.08□□□□□ -0.64
Trim36-201ENSMUST00000037011 Ccer1Q9CQL2 403 aa11.08□□□□□ -0.64
Trim36-201ENSMUST00000037011 Ush1cQ9ES64 910 aa11.08□□□□□ -0.64
Trim36-201ENSMUST00000037011 Sh3bgrQ9WUZ7 214 aa11.08□□□□□ -0.64
Trim36-201ENSMUST00000037011 Zkscan16A2ALW2 728 aa11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 Ppfia1B2RXQ2 1266 aa11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 Pa2g4P50580 394 aaKnown RBP11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 CoilQ5SU73 570 aa11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 Tubb6Q922F4 447 aa11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 Il1rapl2Q9ERS6 686 aa11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 PrkcshO08795 521 aa11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 SympkQ80X82 1284 aa11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 Ttc19Q8CC21 365 aa11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 Utp3Q9JI13 469 aaKnown RBP11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 Cspp1B2RX88 1205 aa11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 Tns3Q5SSZ5 1440 aa11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 Q8BT18 775 aa11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 Bicc1Q99MQ1 977 aaKnown RBP11.07□□□□□ -0.64
Trim36-201ENSMUST00000037011 Tpx2A2APB8 745 aaKnown RBP11.06□□□□□ -0.64
Trim36-201ENSMUST00000037011 PnnO35691 725 aaKnown RBP11.06□□□□□ -0.64
Trim36-201ENSMUST00000037011 Gnat3Q3V3I2 354 aa11.06□□□□□ -0.64
Trim36-201ENSMUST00000037011 Cyp27a1Q9DBG1 533 aa11.06□□□□□ -0.64
Trim36-201ENSMUST00000037011 Kif13aQ9EQW7 1749 aa11.06□□□□□ -0.64
Trim36-201ENSMUST00000037011 Gm973E9Q295 1059 aa11.06□□□□□ -0.64
Trim36-201ENSMUST00000037011 Bloc1s4Q8VED2 215 aa11.06□□□□□ -0.64
Trim36-201ENSMUST00000037011 Nsfl1cQ9CZ44 370 aaKnown RBP11.06□□□□□ -0.64
Trim36-201ENSMUST00000037011 Ankib1Q6ZPS6 1085 aa11.06□□□□□ -0.64
Trim36-201ENSMUST00000037011 Ddx54Q8K4L0 874 aaKnown RBP11.06□□□□□ -0.64
Trim36-201ENSMUST00000037011 Bicd2Q921C5 820 aa11.06□□□□□ -0.64
Trim36-201ENSMUST00000037011 Acsbg1Q99PU5 721 aa11.06□□□□□ -0.64
Trim36-201ENSMUST00000037011 Gsdma2Q32M21 443 aa11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 Cps1Q8C196 1500 aa11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 Babam1Q3UI43 333 aa11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 Rrs1Q9CYH6 365 aaKnown RBP11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 Phkg2Q9DB30 406 aa11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 Plcd4Q8K3R3 807 aa11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 ApobrQ8VBT6 942 aa11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 Zbtb3Q91X45 518 aa11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 Slx4ipQ9D7Y9 413 aa11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 Clstn1Q9EPL2 979 aa11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 NktrP30415 1453 aa11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 Erc1Q99MI1 1120 aa11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 Efcab2Q9CQ46 164 aa11.05□□□□□ -0.64
Trim36-201ENSMUST00000037011 Adam1bQ8R534 806 aa11.04□□□□□ -0.64
Trim36-201ENSMUST00000037011 Pdzd9Q9D9M4 266 aa11.04□□□□□ -0.64
Trim36-201ENSMUST00000037011 Tmem2Q5FWI3 1383 aa11.04□□□□□ -0.64
Trim36-201ENSMUST00000037011 Abcc12Q80WJ6 1366 aa11.04□□□□□ -0.64
Trim36-201ENSMUST00000037011 Syce3B5KM66 88 aa11.04□□□□□ -0.64
Trim36-201ENSMUST00000037011 Cep57l1Q8VDS7 400 aa11.04□□□□□ -0.64
Trim36-201ENSMUST00000037011 Irgm2A0A140LIF8 407 aa11.04□□□□□ -0.64
Trim36-201ENSMUST00000037011 Ccdc173A0JLY1 547 aa11.04□□□□□ -0.64
Trim36-201ENSMUST00000037011 Kif20aP97329 887 aa11.04□□□□□ -0.64
Trim36-201ENSMUST00000037011 Ccdc47Q9D024 483 aaKnown RBP11.04□□□□□ -0.64
Trim36-201ENSMUST00000037011 PplQ9R269 1755 aa11.04□□□□□ -0.64
Trim36-201ENSMUST00000037011 Abcc10Q8R4P9 1501 aa11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 PdcQ9QW08 244 aa11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 Hap1O35668 628 aa11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 Card10P58660 1021 aa11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 Arhgef1Q61210 920 aaKnown RBP11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 Prune1Q8BIW1 454 aa11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 FosbP13346 338 aa11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 Myd88P22366 296 aa11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 Cplx2P84086 134 aa11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 Bend3Q6PAL0 825 aa11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 Prkab2Q6PAM0 271 aa11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 Ppp6r1Q7TSI3 856 aa11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 Zeb2Q9R0G7 1215 aa11.03□□□□□ -0.64
Trim36-201ENSMUST00000037011 Cnnm3Q32NY4 713 aa11.02□□□□□ -0.64
Trim36-201ENSMUST00000037011 Polr3gQ6NXY9 223 aa11.02□□□□□ -0.64
Trim36-201ENSMUST00000037011 Srek1Q8BZX4 494 aaKnown RBP11.02□□□□□ -0.64
Trim36-201ENSMUST00000037011 Slit3Q9WVB4 1523 aa11.02□□□□□ -0.64
Trim36-201ENSMUST00000037011 Col1a2Q01149 1372 aa11.02□□□□□ -0.65
Trim36-201ENSMUST00000037011 Kif1aP33173 1695 aa11.02□□□□□ -0.65
Trim36-201ENSMUST00000037011 Cwc25Q9DBF7 416 aa11.02□□□□□ -0.65
Trim36-201ENSMUST00000037011 Gdpd2Q9ESM6 539 aa11.02□□□□□ -0.65
Trim36-201ENSMUST00000037011 Polr3dQ91WD1 398 aa11.02□□□□□ -0.65
Trim36-201ENSMUST00000037011 Pdzrn3Q69ZS0 1063 aa11.01□□□□□ -0.65
Trim36-201ENSMUST00000037011 Atf7Q8R0S1 413 aa11.01□□□□□ -0.65
Trim36-201ENSMUST00000037011 Rbm8a2A0A0N4SUH6 174 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms