RNA–Protein interactions for RNA: ENSMUST00000037011.4

Trim36-201, Transcript of E3 ubiquitin-protein ligase Trim36, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim36, Length 4,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36-201ENSMUST00000037011 NischQ80TM9 1593 aa16.95■□□□□ 0.3
Trim36-201ENSMUST00000037011 Rhox8Q6VSS7 320 aa16.79■□□□□ 0.28
Trim36-201ENSMUST00000037011 Abcc9P70170 1546 aa16.25■□□□□ 0.19
Trim36-201ENSMUST00000037011 Gm35339A0A140LHH9 1649 aa16.05■□□□□ 0.16
Trim36-201ENSMUST00000037011 Abcc8B2RUS7 1588 aa15.9■□□□□ 0.14
Trim36-201ENSMUST00000037011 Rtl1Q7M732 1744 aa15.49■□□□□ 0.07
Trim36-201ENSMUST00000037011 Ccdc180J3QNE4 1664 aa15.35■□□□□ 0.05
Trim36-201ENSMUST00000037011 Ccdc136Q3TVA9 1136 aa15.32■□□□□ 0.04
Trim36-201ENSMUST00000037011 Rpgrip1Q9EPQ2 1331 aa15.09■□□□□ 0.01
Trim36-201ENSMUST00000037011 Trim41Q5NCC3 630 aa15.04■□□□□ -0
Trim36-201ENSMUST00000037011 Ehmt2Q9Z148 1263 aaKnown RBP14.91□□□□□ -0.02
Trim36-201ENSMUST00000037011 HrcG5E8J6 738 aa14.89□□□□□ -0.03
Trim36-201ENSMUST00000037011 Rb1cc1Q9ESK9 1588 aa14.87□□□□□ -0.03
Trim36-201ENSMUST00000037011 Zcchc6Q5BLK4 1491 aaKnown RBP14.86□□□□□ -0.03
Trim36-201ENSMUST00000037011 Cngb1E1AZ71 1325 aa14.84□□□□□ -0.03
Trim36-201ENSMUST00000037011 Dcaf1Q80TR8 1506 aa14.8□□□□□ -0.04
Trim36-201ENSMUST00000037011 Esf1Q3V1V3 845 aaKnown RBP14.75□□□□□ -0.05
Trim36-201ENSMUST00000037011 NacadQ5SWP3 1504 aa14.68□□□□□ -0.06
Trim36-201ENSMUST00000037011 Baz1aO88379 1555 aa14.65□□□□□ -0.06
Trim36-201ENSMUST00000037011 Gab3Q8BSM5 595 aa14.63□□□□□ -0.07
Trim36-201ENSMUST00000037011 Kdm5dQ62240 1548 aa14.62□□□□□ -0.07
Trim36-201ENSMUST00000037011 Acin1Q9JIX8 1338 aaKnown RBP14.6□□□□□ -0.07
Trim36-201ENSMUST00000037011 ScribQ80U72 1612 aa14.58□□□□□ -0.07
Trim36-201ENSMUST00000037011 Brd4Q9ESU6 1400 aaKnown RBP14.37□□□□□ -0.11
Trim36-201ENSMUST00000037011 Cep164Q5DU05 1446 aa14.3□□□□□ -0.12
Trim36-201ENSMUST00000037011 Npm2Q80W85 207 aa14.28□□□□□ -0.12
Trim36-201ENSMUST00000037011 Crybg2B7ZCC2 1516 aa14.26□□□□□ -0.13
Trim36-201ENSMUST00000037011 Myt1lP97500 1187 aa14.22□□□□□ -0.13
Trim36-201ENSMUST00000037011 Sycp2Q9CUU3 1500 aa14.22□□□□□ -0.13
Trim36-201ENSMUST00000037011 Chic1Q8CBW7 227 aa14.16□□□□□ -0.14
Trim36-201ENSMUST00000037011 Smarca2Q6DIC0 1577 aa14.15□□□□□ -0.14
Trim36-201ENSMUST00000037011 Zeb1Q64318 1117 aa14.11□□□□□ -0.15
Trim36-201ENSMUST00000037011 NefmP08553 848 aa14.1□□□□□ -0.15
Trim36-201ENSMUST00000037011 Golga3P55937 1487 aa14.07□□□□□ -0.16
Trim36-201ENSMUST00000037011 UbtfP25976 765 aaKnown RBP14.05□□□□□ -0.16
Trim36-201ENSMUST00000037011 Las1lA2BE28 776 aaKnown RBP14.04□□□□□ -0.16
Trim36-201ENSMUST00000037011 Rsf1E9PWW9 1441 aaKnown RBP13.98□□□□□ -0.17
Trim36-201ENSMUST00000037011 Il27Q8K3I6 234 aa13.98□□□□□ -0.17
Trim36-201ENSMUST00000037011 Wdr66E9Q743 1299 aa13.95□□□□□ -0.18
Trim36-201ENSMUST00000037011 Cecr2E9Q2Z1 1453 aa13.94□□□□□ -0.18
Trim36-201ENSMUST00000037011 Pcgf6Q99NA9 353 aa13.93□□□□□ -0.18
Trim36-201ENSMUST00000037011 Mier1Q5UAK0 511 aa13.87□□□□□ -0.19
Trim36-201ENSMUST00000037011 Ccdc88bQ4QRL3 1481 aa13.85□□□□□ -0.19
Trim36-201ENSMUST00000037011 CftrP26361 1476 aa13.84□□□□□ -0.19
Trim36-201ENSMUST00000037011 Synj1Q8CHC4 1574 aa13.83□□□□□ -0.2
Trim36-201ENSMUST00000037011 Supt5hO55201 1082 aaKnown RBP13.75□□□□□ -0.21
Trim36-201ENSMUST00000037011 Ap3b1Q9Z1T1 1105 aa13.72□□□□□ -0.21
Trim36-201ENSMUST00000037011 Smarca4Q3TKT4 1613 aaKnown RBP13.69□□□□□ -0.22
Trim36-201ENSMUST00000037011 Cttnbp2B9EJA2 1648 aa13.69□□□□□ -0.22
Trim36-201ENSMUST00000037011 Fmn1Q05860 1466 aa13.68□□□□□ -0.22
Trim36-201ENSMUST00000037011 Plekhg3Q4VAC9 1341 aa13.68□□□□□ -0.22
Trim36-201ENSMUST00000037011 Clip1Q922J3 1391 aa13.67□□□□□ -0.22
Trim36-201ENSMUST00000037011 Ube2uB1AUC4 352 aa13.66□□□□□ -0.22
Trim36-201ENSMUST00000037011 Pds5bQ4VA53 1446 aaKnown RBP13.65□□□□□ -0.22
Trim36-201ENSMUST00000037011 Npm1Q61937 292 aaKnown RBP13.65□□□□□ -0.22
Trim36-201ENSMUST00000037011 BicraF8VPZ9 1578 aa13.64□□□□□ -0.23
Trim36-201ENSMUST00000037011 Atad2bE9Q166 1460 aaKnown RBP13.58□□□□□ -0.24
Trim36-201ENSMUST00000037011 Ercc6F8VPZ5 1481 aa13.57□□□□□ -0.24
Trim36-201ENSMUST00000037011 Kif15Q6P9L6 1387 aa13.57□□□□□ -0.24
Trim36-201ENSMUST00000037011 TonslQ6NZL6 1363 aa13.57□□□□□ -0.24
Trim36-201ENSMUST00000037011 Fam50aQ9WV03 339 aaKnown RBP13.53□□□□□ -0.24
Trim36-201ENSMUST00000037011 Cep162Q6ZQ06 1403 aa13.53□□□□□ -0.24
Trim36-201ENSMUST00000037011 Ubl4bQ9CQ84 188 aa13.51□□□□□ -0.25
Trim36-201ENSMUST00000037011 Iqgap2Q3UQ44 1575 aa13.51□□□□□ -0.25
Trim36-201ENSMUST00000037011 Ccdc18Q640L5 1455 aa13.45□□□□□ -0.26
Trim36-201ENSMUST00000037011 Lmod2Q3UHZ5 550 aa13.45□□□□□ -0.26
Trim36-201ENSMUST00000037011 Rapgef2Q8CHG7 1496 aa13.45□□□□□ -0.26
Trim36-201ENSMUST00000037011 Setd5Q5XJV7 1441 aa13.44□□□□□ -0.26
Trim36-201ENSMUST00000037011 Cc2d2aQ8CFW7 1633 aa13.44□□□□□ -0.26
Trim36-201ENSMUST00000037011 Cdk11bP24788 784 aaKnown RBP13.43□□□□□ -0.26
Trim36-201ENSMUST00000037011 Top2bQ64511 1612 aa13.43□□□□□ -0.26
Trim36-201ENSMUST00000037011 Sall2Q9QX96 1004 aa13.42□□□□□ -0.26
Trim36-201ENSMUST00000037011 Eea1Q8BL66 1411 aa13.42□□□□□ -0.26
Trim36-201ENSMUST00000037011 Ppargc1bQ8VHJ7 1014 aa13.41□□□□□ -0.26
Trim36-201ENSMUST00000037011 ClspnQ80YR7 1315 aa13.4□□□□□ -0.26
Trim36-201ENSMUST00000037011 Nop58Q6DFW4 536 aaKnown RBP13.39□□□□□ -0.27
Trim36-201ENSMUST00000037011 Top2aQ01320 1528 aaKnown RBP13.37□□□□□ -0.27
Trim36-201ENSMUST00000037011 BlmO88700 1416 aa13.34□□□□□ -0.27
Trim36-201ENSMUST00000037011 NclP09405 707 aaKnown RBP13.34□□□□□ -0.27
Trim36-201ENSMUST00000037011 Eid3Q3V124 375 aa13.32□□□□□ -0.28
Trim36-201ENSMUST00000037011 Stra8P70278 393 aa13.26□□□□□ -0.29
Trim36-201ENSMUST00000037011 Neurod1Q60867 357 aa13.25□□□□□ -0.29
Trim36-201ENSMUST00000037011 Phldb1Q6PDH0 1371 aaKnown RBP13.25□□□□□ -0.29
Trim36-201ENSMUST00000037011 Cux2P70298 1426 aa13.22□□□□□ -0.29
Trim36-201ENSMUST00000037011 Frmpd1A2AKB4 1549 aa13.21□□□□□ -0.29
Trim36-201ENSMUST00000037011 Ccer2J3QPU5 274 aa13.21□□□□□ -0.29
Trim36-201ENSMUST00000037011 Aebp2Q9Z248 504 aaKnown RBP13.21□□□□□ -0.29
Trim36-201ENSMUST00000037011 Baz1bQ9Z277 1479 aa13.19□□□□□ -0.3
Trim36-201ENSMUST00000037011 Wdr62Q3U3T8 1523 aa13.15□□□□□ -0.3
Trim36-201ENSMUST00000037011 Shroom4Q1W617 1475 aa13.15□□□□□ -0.31
Trim36-201ENSMUST00000037011 Arhgap35Q91YM2 1499 aa13.13□□□□□ -0.31
Trim36-201ENSMUST00000037011 CenpbP27790 599 aa13.11□□□□□ -0.31
Trim36-201ENSMUST00000037011 NrkQ9R0G8 1455 aa13.1□□□□□ -0.31
Trim36-201ENSMUST00000037011 Carmil1Q6EDY6 1374 aa13.1□□□□□ -0.31
Trim36-201ENSMUST00000037011 LrpprcQ6PB66 1392 aaKnown RBP13.1□□□□□ -0.31
Trim36-201ENSMUST00000037011 Anks4bQ8K3X6 423 aa13.09□□□□□ -0.31
Trim36-201ENSMUST00000037011 Slc24a1Q91WD8 1130 aa13.09□□□□□ -0.31
Trim36-201ENSMUST00000037011 Tnnt3Q9QZ47 272 aa13.09□□□□□ -0.31
Trim36-201ENSMUST00000037011 Chic2Q9D9G3 165 aa13.08□□□□□ -0.32
Trim36-201ENSMUST00000037011 PtprkP35822 1457 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms