RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Atg4aQ8C9S8 396 aa10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Pnmal2G3X9N3 661 aa10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Smg7Q5RJH6 1138 aaKnown RBP10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Fkbp5Q64378 456 aa10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 PogkQ80TC5 607 aa10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Ppp6r3Q922D4 844 aa10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Ccdc155Q80VJ8 648 aa10.17□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Disp3A3KFU9 1347 aa10.17□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Fam50bQ9WTJ8 334 aa10.17□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Abcc10Q8R4P9 1501 aa10.17□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 CgnP59242 1191 aa10.17□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Nwd1A6H603 1563 aa10.17□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Kif13aQ9EQW7 1749 aa10.17□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Card10P58660 1021 aa10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 CoilQ5SU73 570 aa10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Sf3a1Q8K4Z5 791 aaKnown RBP10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 RestQ8VIG1 1082 aa10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 NaspQ99MD9 773 aaKnown RBP10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Bag3Q9JLV1 577 aaKnown RBP10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Tmem119Q8R138 280 aa10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Stk11ipQ3TAA7 1072 aa10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 CrklP47941 303 aa10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Adam1bQ8R534 806 aa10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Gm973E9Q295 1059 aa10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Snap23O09044 210 aa10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Grm8P47743 908 aa10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Gnat3Q3V3I2 354 aa10.16□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Cspp1B2RX88 1205 aa10.15□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Kif20aP97329 887 aa10.15□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Plcd4Q8K3R3 807 aa10.15□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Ccdc47Q9D024 483 aaKnown RBP10.15□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 HellsQ60848 821 aa10.15□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Slc26a8Q8R0C3 999 aa10.15□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Ccdc173A0JLY1 547 aa10.15□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Ppfia1B2RXQ2 1266 aa10.15□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Mctp2Q5RJH2 878 aa10.15□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Itsn1Q9Z0R4 1714 aa10.15□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Cadps2Q8BYR5 1297 aa10.15□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Srek1Q8BZX4 494 aaKnown RBP10.15□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Mybbp1aQ7TPV4 1344 aaKnown RBP10.15□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 RictorQ6QI06 1708 aa10.15□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Gsdma2Q32M21 443 aa10.14□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Slc35g1Q8BY79 368 aa10.14□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Bag4Q8CI61 457 aa10.14□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Erc1Q99MI1 1120 aa10.14□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Gjb2Q00977 226 aa10.14□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 TnrQ8BYI9 1358 aa10.14□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Phkg2Q9DB30 406 aa10.14□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 GpkowQ56A08 488 aa10.13□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Bcl9Q9D219 1425 aa10.13□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Col1a2Q01149 1372 aa10.13□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Becn1O88597 448 aa10.13□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 SympkQ80X82 1284 aa10.13□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Soga3Q6NZL0 945 aa10.13□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Pdzd9Q9D9M4 266 aa10.13□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 PdcQ9QW08 244 aa10.12□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Kif3aP28741 701 aa10.12□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 EvcP57680 1005 aa10.12□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Ppp6r1Q7TSI3 856 aa10.12□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Lmbr1lQ9D1E5 489 aa10.12□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Ush1cQ9ES64 910 aa10.12□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Hmg20bQ9Z104 317 aa10.12□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 IghaA0A0A6YXW6 389 aa10.12□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Ppp4r3aQ6P2K6 820 aa10.12□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Rapgef3Q8VCC8 918 aa10.12□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Bicc1Q99MQ1 977 aaKnown RBP10.12□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Bend3Q6PAL0 825 aa10.12□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Zkscan16A2ALW2 728 aa10.11□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Rasa1E9PYG6 1038 aa10.11□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Cep57l1Q8VDS7 400 aa10.11□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Efcab2Q9CQ46 164 aa10.11□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Simc1E9Q6E9 1354 aa10.11□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Ggt6Q6PDE7 497 aa10.11□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Nphp3Q7TNH6 1325 aa10.11□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Cyp27a1Q9DBG1 533 aa10.11□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Cplx2P84086 134 aa10.11□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 SrrtQ99MR6 875 aaKnown RBP10.11□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Med4Q9CQA5 270 aa10.11□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Spef2Q8C9J3 1734 aa10.1□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Zbtb3Q91X45 518 aa10.1□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Chmp4cQ9D7F7 232 aa10.1□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Cwc25Q9DBF7 416 aa10.1□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Kdm3aQ6PCM1 1323 aa10.1□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Pik3c2bE9QAN8 1632 aa10.1□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Znf692Q3U381 531 aa10.1□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Pde4dQ01063 747 aa10.1□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Atf7Q8R0S1 413 aa10.1□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 ApobrQ8VBT6 942 aa10.1□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Fam184aE9PW83 1143 aa10.09□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Nol8Q3UHX0 1147 aaKnown RBP10.09□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Ccer1Q9CQL2 403 aa10.09□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Usp48Q3V0C5 1052 aa10.09□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Mad1l1Q9WTX8 717 aaKnown RBP10.09□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Myd88P22366 296 aa10.09□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Evc2Q8K1G2 1220 aa10.09□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Sh3bgrQ9WUZ7 214 aa10.09□□□□□ -0.79
Sf3b1-201ENSMUST00000027127 Trim34bJ3QNR8 485 aa10.08□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Fez1Q8K0X8 392 aa10.08□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Riok1Q922Q2 567 aa10.08□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 EzrP26040 586 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms