RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 NischQ80TM9 1593 aa15.68■□□□□ 0.1
Sf3b1-201ENSMUST00000027127 Rhox8Q6VSS7 320 aa15.26■□□□□ 0.03
Sf3b1-201ENSMUST00000027127 Abcc9P70170 1546 aa15.08■□□□□ 0.01
Sf3b1-201ENSMUST00000027127 Gm35339A0A140LHH9 1649 aa15.01□□□□□ -0.01
Sf3b1-201ENSMUST00000027127 Abcc8B2RUS7 1588 aa14.76□□□□□ -0.05
Sf3b1-201ENSMUST00000027127 Rtl1Q7M732 1744 aa14.38□□□□□ -0.11
Sf3b1-201ENSMUST00000027127 Ccdc180J3QNE4 1664 aa14.19□□□□□ -0.14
Sf3b1-201ENSMUST00000027127 Ccdc136Q3TVA9 1136 aa13.9□□□□□ -0.18
Sf3b1-201ENSMUST00000027127 Rpgrip1Q9EPQ2 1331 aa13.9□□□□□ -0.18
Sf3b1-201ENSMUST00000027127 Dcaf1Q80TR8 1506 aa13.87□□□□□ -0.19
Sf3b1-201ENSMUST00000027127 Trim41Q5NCC3 630 aa13.85□□□□□ -0.19
Sf3b1-201ENSMUST00000027127 HrcG5E8J6 738 aa13.76□□□□□ -0.21
Sf3b1-201ENSMUST00000027127 Rb1cc1Q9ESK9 1588 aa13.74□□□□□ -0.21
Sf3b1-201ENSMUST00000027127 NacadQ5SWP3 1504 aa13.66□□□□□ -0.22
Sf3b1-201ENSMUST00000027127 Zcchc6Q5BLK4 1491 aaKnown RBP13.64□□□□□ -0.23
Sf3b1-201ENSMUST00000027127 Baz1aO88379 1555 aa13.59□□□□□ -0.23
Sf3b1-201ENSMUST00000027127 Kdm5dQ62240 1548 aa13.53□□□□□ -0.24
Sf3b1-201ENSMUST00000027127 Cngb1E1AZ71 1325 aa13.51□□□□□ -0.25
Sf3b1-201ENSMUST00000027127 ScribQ80U72 1612 aa13.49□□□□□ -0.25
Sf3b1-201ENSMUST00000027127 Esf1Q3V1V3 845 aaKnown RBP13.47□□□□□ -0.25
Sf3b1-201ENSMUST00000027127 Crybg2B7ZCC2 1516 aa13.36□□□□□ -0.27
Sf3b1-201ENSMUST00000027127 Acin1Q9JIX8 1338 aaKnown RBP13.34□□□□□ -0.27
Sf3b1-201ENSMUST00000027127 Ehmt2Q9Z148 1263 aaKnown RBP13.32□□□□□ -0.28
Sf3b1-201ENSMUST00000027127 Brd4Q9ESU6 1400 aaKnown RBP13.31□□□□□ -0.28
Sf3b1-201ENSMUST00000027127 Gab3Q8BSM5 595 aa13.23□□□□□ -0.29
Sf3b1-201ENSMUST00000027127 Sycp2Q9CUU3 1500 aa13.22□□□□□ -0.29
Sf3b1-201ENSMUST00000027127 Cep164Q5DU05 1446 aa13.19□□□□□ -0.3
Sf3b1-201ENSMUST00000027127 Smarca2Q6DIC0 1577 aa13.13□□□□□ -0.31
Sf3b1-201ENSMUST00000027127 Npm2Q80W85 207 aa13.02□□□□□ -0.32
Sf3b1-201ENSMUST00000027127 Golga3P55937 1487 aa13□□□□□ -0.33
Sf3b1-201ENSMUST00000027127 NefmP08553 848 aa12.95□□□□□ -0.34
Sf3b1-201ENSMUST00000027127 Chic1Q8CBW7 227 aa12.91□□□□□ -0.34
Sf3b1-201ENSMUST00000027127 Myt1lP97500 1187 aa12.9□□□□□ -0.34
Sf3b1-201ENSMUST00000027127 Las1lA2BE28 776 aaKnown RBP12.82□□□□□ -0.36
Sf3b1-201ENSMUST00000027127 Cecr2E9Q2Z1 1453 aa12.82□□□□□ -0.36
Sf3b1-201ENSMUST00000027127 Zeb1Q64318 1117 aa12.82□□□□□ -0.36
Sf3b1-201ENSMUST00000027127 Rsf1E9PWW9 1441 aaKnown RBP12.81□□□□□ -0.36
Sf3b1-201ENSMUST00000027127 CftrP26361 1476 aa12.81□□□□□ -0.36
Sf3b1-201ENSMUST00000027127 Synj1Q8CHC4 1574 aa12.75□□□□□ -0.37
Sf3b1-201ENSMUST00000027127 UbtfP25976 765 aaKnown RBP12.73□□□□□ -0.37
Sf3b1-201ENSMUST00000027127 Smarca4Q3TKT4 1613 aaKnown RBP12.71□□□□□ -0.37
Sf3b1-201ENSMUST00000027127 Pds5bQ4VA53 1446 aaKnown RBP12.71□□□□□ -0.37
Sf3b1-201ENSMUST00000027127 Ccdc88bQ4QRL3 1481 aa12.69□□□□□ -0.38
Sf3b1-201ENSMUST00000027127 Il27Q8K3I6 234 aa12.69□□□□□ -0.38
Sf3b1-201ENSMUST00000027127 Cttnbp2B9EJA2 1648 aa12.69□□□□□ -0.38
Sf3b1-201ENSMUST00000027127 Fmn1Q05860 1466 aa12.67□□□□□ -0.38
Sf3b1-201ENSMUST00000027127 BicraF8VPZ9 1578 aa12.64□□□□□ -0.39
Sf3b1-201ENSMUST00000027127 Atad2bE9Q166 1460 aaKnown RBP12.63□□□□□ -0.39
Sf3b1-201ENSMUST00000027127 Mier1Q5UAK0 511 aa12.62□□□□□ -0.39
Sf3b1-201ENSMUST00000027127 Pcgf6Q99NA9 353 aa12.61□□□□□ -0.39
Sf3b1-201ENSMUST00000027127 Wdr66E9Q743 1299 aa12.61□□□□□ -0.39
Sf3b1-201ENSMUST00000027127 Ercc6F8VPZ5 1481 aa12.6□□□□□ -0.39
Sf3b1-201ENSMUST00000027127 Npm1Q61937 292 aaKnown RBP12.54□□□□□ -0.4
Sf3b1-201ENSMUST00000027127 Clip1Q922J3 1391 aa12.53□□□□□ -0.4
Sf3b1-201ENSMUST00000027127 Iqgap2Q3UQ44 1575 aa12.51□□□□□ -0.41
Sf3b1-201ENSMUST00000027127 Kif15Q6P9L6 1387 aa12.49□□□□□ -0.41
Sf3b1-201ENSMUST00000027127 Cep162Q6ZQ06 1403 aa12.46□□□□□ -0.41
Sf3b1-201ENSMUST00000027127 Ccdc18Q640L5 1455 aa12.46□□□□□ -0.42
Sf3b1-201ENSMUST00000027127 Top2bQ64511 1612 aa12.44□□□□□ -0.42
Sf3b1-201ENSMUST00000027127 Rapgef2Q8CHG7 1496 aa12.44□□□□□ -0.42
Sf3b1-201ENSMUST00000027127 Ap3b1Q9Z1T1 1105 aa12.42□□□□□ -0.42
Sf3b1-201ENSMUST00000027127 Supt5hO55201 1082 aaKnown RBP12.42□□□□□ -0.42
Sf3b1-201ENSMUST00000027127 Ubl4bQ9CQ84 188 aa12.41□□□□□ -0.42
Sf3b1-201ENSMUST00000027127 Plekhg3Q4VAC9 1341 aa12.4□□□□□ -0.42
Sf3b1-201ENSMUST00000027127 TonslQ6NZL6 1363 aa12.39□□□□□ -0.43
Sf3b1-201ENSMUST00000027127 Ube2uB1AUC4 352 aa12.39□□□□□ -0.43
Sf3b1-201ENSMUST00000027127 Top2aQ01320 1528 aaKnown RBP12.38□□□□□ -0.43
Sf3b1-201ENSMUST00000027127 Pelp1Q9DBD5 1123 aaKnown RBP12.37□□□□□ -0.43
Sf3b1-201ENSMUST00000027127 Eea1Q8BL66 1411 aa12.36□□□□□ -0.43
Sf3b1-201ENSMUST00000027127 Cc2d2aQ8CFW7 1633 aa12.34□□□□□ -0.43
Sf3b1-201ENSMUST00000027127 Setd5Q5XJV7 1441 aa12.33□□□□□ -0.44
Sf3b1-201ENSMUST00000027127 Phldb1Q6PDH0 1371 aaKnown RBP12.3□□□□□ -0.44
Sf3b1-201ENSMUST00000027127 Fam50aQ9WV03 339 aaKnown RBP12.29□□□□□ -0.44
Sf3b1-201ENSMUST00000027127 ClspnQ80YR7 1315 aa12.26□□□□□ -0.45
Sf3b1-201ENSMUST00000027127 Frmpd1A2AKB4 1549 aa12.23□□□□□ -0.45
Sf3b1-201ENSMUST00000027127 Ccer2J3QPU5 274 aa12.22□□□□□ -0.45
Sf3b1-201ENSMUST00000027127 Cdk11bP24788 784 aaKnown RBP12.22□□□□□ -0.45
Sf3b1-201ENSMUST00000027127 Wdr62Q3U3T8 1523 aa12.21□□□□□ -0.45
Sf3b1-201ENSMUST00000027127 BlmO88700 1416 aa12.21□□□□□ -0.45
Sf3b1-201ENSMUST00000027127 Cux2P70298 1426 aa12.2□□□□□ -0.46
Sf3b1-201ENSMUST00000027127 Stra8P70278 393 aa12.2□□□□□ -0.46
Sf3b1-201ENSMUST00000027127 Lmod2Q3UHZ5 550 aa12.19□□□□□ -0.46
Sf3b1-201ENSMUST00000027127 NrkQ9R0G8 1455 aa12.17□□□□□ -0.46
Sf3b1-201ENSMUST00000027127 Shroom4Q1W617 1475 aa12.16□□□□□ -0.46
Sf3b1-201ENSMUST00000027127 Nop58Q6DFW4 536 aaKnown RBP12.16□□□□□ -0.46
Sf3b1-201ENSMUST00000027127 Sall2Q9QX96 1004 aa12.15□□□□□ -0.46
Sf3b1-201ENSMUST00000027127 Lamc3Q9R0B6 1581 aa12.15□□□□□ -0.47
Sf3b1-201ENSMUST00000027127 Baz1bQ9Z277 1479 aa12.14□□□□□ -0.47
Sf3b1-201ENSMUST00000027127 Map3k1P53349 1493 aa12.13□□□□□ -0.47
Sf3b1-201ENSMUST00000027127 Carmil1Q6EDY6 1374 aa12.13□□□□□ -0.47
Sf3b1-201ENSMUST00000027127 NclP09405 707 aaKnown RBP12.13□□□□□ -0.47
Sf3b1-201ENSMUST00000027127 LrpprcQ6PB66 1392 aaKnown RBP12.11□□□□□ -0.47
Sf3b1-201ENSMUST00000027127 Arhgap35Q91YM2 1499 aa12.11□□□□□ -0.47
Sf3b1-201ENSMUST00000027127 CntlnA2AM05 1397 aa12.09□□□□□ -0.47
Sf3b1-201ENSMUST00000027127 Efcab5A0JP43 1406 aa12.09□□□□□ -0.47
Sf3b1-201ENSMUST00000027127 TnnQ80Z71 1560 aa12.08□□□□□ -0.48
Sf3b1-201ENSMUST00000027127 Grin2bQ01097 1482 aa12.07□□□□□ -0.48
Sf3b1-201ENSMUST00000027127 Camsap1A2AHC3 1581 aa12.05□□□□□ -0.48
Sf3b1-201ENSMUST00000027127 Mia2Q91ZV0 1396 aa12.05□□□□□ -0.48
Sf3b1-201ENSMUST00000027127 Rpap1Q80TE0 1409 aa12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 95.5 ms