RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W RIC1P40395 1056 aa2.42□□□□□ -2.02
SEC16YPL085W YFR018CP43599 363 aa2.42□□□□□ -2.02
SEC16YPL085W HRQ1Q05549 1077 aa2.42□□□□□ -2.02
SEC16YPL085W DDP1Q99321 188 aaKnown RBP2.42□□□□□ -2.02
SEC16YPL085W PGK1P00560 416 aaKnown RBP2.42□□□□□ -2.02
SEC16YPL085W AI3P03877 415 aa2.42□□□□□ -2.02
SEC16YPL085W BUD31P25337 157 aaPredicted RBP2.42□□□□□ -2.02
SEC16YPL085W SHE3P38272 425 aaKnown RBP2.42□□□□□ -2.02
SEC16YPL085W THI6P41835 540 aa2.42□□□□□ -2.02
SEC16YPL085W DAK2P43550 591 aa2.42□□□□□ -2.02
SEC16YPL085W DBP9Q06218 594 aaKnown RBP2.42□□□□□ -2.02
SEC16YPL085W GPN2Q08726 347 aaPredicted RBP2.42□□□□□ -2.02
SEC16YPL085W YMR085WP0CF18 432 aa2.42□□□□□ -2.02
SEC16YPL085W PKC1P24583 1151 aa2.42□□□□□ -2.02
SEC16YPL085W SVF1Q05515 481 aa2.42□□□□□ -2.02
SEC16YPL085W SLX4Q12098 748 aa2.42□□□□□ -2.02
SEC16YPL085W HSP82P02829 709 aaKnown RBP2.42□□□□□ -2.02
SEC16YPL085W ASF2P32448 525 aaPredicted RBP2.42□□□□□ -2.02
SEC16YPL085W BIO2P32451 375 aa2.42□□□□□ -2.02
SEC16YPL085W STN1P38960 494 aa2.42□□□□□ -2.02
SEC16YPL085W YGR021WP53212 290 aa2.42□□□□□ -2.02
SEC16YPL085W TOF1P53840 1238 aa2.42□□□□□ -2.02
SEC16YPL085W PRP42Q03776 544 aaKnown RBP2.42□□□□□ -2.02
SEC16YPL085W PCT1P13259 424 aa2.41□□□□□ -2.02
SEC16YPL085W GCD6P32501 712 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W TOS1P38288 455 aa2.41□□□□□ -2.02
SEC16YPL085W SHQ1P40486 507 aaPredicted RBP2.41□□□□□ -2.02
SEC16YPL085W RNR4P49723 345 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W ASE1P50275 885 aa2.41□□□□□ -2.02
SEC16YPL085W PEX31P53203 462 aa2.41□□□□□ -2.02
SEC16YPL085W BNI5P53890 448 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W GPD1Q00055 391 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W SEN54Q02825 467 aaPredicted RBP2.41□□□□□ -2.02
SEC16YPL085W GNT1Q12096 491 aa2.41□□□□□ -2.02
SEC16YPL085W RGT1P32862 1170 aa2.41□□□□□ -2.02
SEC16YPL085W KTR4P38131 464 aa2.41□□□□□ -2.02
SEC16YPL085W RPG1P38249 964 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W EMP47P43555 445 aa2.41□□□□□ -2.02
SEC16YPL085W BDP1P46678 594 aa2.41□□□□□ -2.02
SEC16YPL085W ENT3P47160 408 aa2.41□□□□□ -2.02
SEC16YPL085W LIF1P53150 421 aa2.41□□□□□ -2.02
SEC16YPL085W FCP1Q03254 732 aa2.41□□□□□ -2.02
SEC16YPL085W GRX3Q03835 250 aa2.41□□□□□ -2.02
SEC16YPL085W SXM1Q04175 944 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W ECM7Q06200 448 aa2.41□□□□□ -2.02
SEC16YPL085W GRE2Q12068 342 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W TY1B-JR2P47100 1755 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W TY1B-ER2Q03619 1755 aa2.41□□□□□ -2.02
SEC16YPL085W TY1B-MR1Q04214 1755 aa2.41□□□□□ -2.02
SEC16YPL085W TY1B-MR2Q04670 1755 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W TY1B-LR1Q12088 1755 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W TY1B-NL1Q12112 1755 aa2.41□□□□□ -2.02
SEC16YPL085W TY1B-GR1Q12141 1755 aa2.41□□□□□ -2.02
SEC16YPL085W TY1B-BLQ12490 1755 aa2.41□□□□□ -2.02
SEC16YPL085W ATP1P07251 545 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W PMS1P14242 873 aa2.41□□□□□ -2.02
SEC16YPL085W HEM12P32347 362 aaPredicted RBP2.41□□□□□ -2.02
SEC16YPL085W RTG2P32608 588 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W PRX1P34227 261 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W SET3P36124 751 aa2.41□□□□□ -2.02
SEC16YPL085W ESBP6P53918 673 aa2.41□□□□□ -2.02
SEC16YPL085W SAS4Q04003 481 aa2.41□□□□□ -2.02
SEC16YPL085W KAR5Q04746 504 aa2.41□□□□□ -2.02
SEC16YPL085W DON1Q05610 365 aa2.41□□□□□ -2.02
SEC16YPL085W SSQ1Q05931 657 aaPredicted RBP2.41□□□□□ -2.02
SEC16YPL085W ADY3Q07732 790 aa2.41□□□□□ -2.02
SEC16YPL085W YPK1P12688 680 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W KIN1P13185 1064 aa2.41□□□□□ -2.02
SEC16YPL085W RTS3P53289 263 aa2.41□□□□□ -2.02
SEC16YPL085W COP1P53622 1201 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W RRN11Q04712 507 aa2.41□□□□□ -2.02
SEC16YPL085W CST9Q06032 482 aa2.41□□□□□ -2.02
SEC16YPL085W SGT2Q12118 346 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W CDC8P00572 216 aa2.41□□□□□ -2.02
SEC16YPL085W HXK1P04806 485 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W KRE2P27809 442 aa2.41□□□□□ -2.02
SEC16YPL085W CLB5P30283 435 aa2.41□□□□□ -2.02
SEC16YPL085W MRPL10P36520 322 aa2.41□□□□□ -2.02
SEC16YPL085W AAP1P37898 856 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W MAK5P38112 773 aaPredicted RBP2.41□□□□□ -2.02
SEC16YPL085W MUM2P38236 366 aa2.41□□□□□ -2.02
SEC16YPL085W YTA6P40328 754 aa2.41□□□□□ -2.02
SEC16YPL085W ARH1P48360 493 aa2.41□□□□□ -2.02
SEC16YPL085W RPT6Q01939 405 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W MET14Q02196 202 aa2.41□□□□□ -2.02
SEC16YPL085W SHR3Q02774 210 aa2.41□□□□□ -2.02
SEC16YPL085W TFB3Q03290 321 aa2.41□□□□□ -2.02
SEC16YPL085W ESF1Q06344 628 aaKnown RBP2.41□□□□□ -2.02
SEC16YPL085W PEX19Q07418 342 aa2.41□□□□□ -2.02
SEC16YPL085W MET7Q08645 548 aa2.41□□□□□ -2.02
SEC16YPL085W MCM16Q12262 181 aa2.41□□□□□ -2.02
SEC16YPL085W YOL098CQ12496 1037 aa2.41□□□□□ -2.02
SEC16YPL085W RPL8AP17076 256 aaKnown RBP2.4□□□□□ -2.02
SEC16YPL085W PRE8P23639 250 aa2.4□□□□□ -2.02
SEC16YPL085W ILV6P25605 309 aaKnown RBP2.4□□□□□ -2.02
SEC16YPL085W NPL6P32832 435 aa2.4□□□□□ -2.02
SEC16YPL085W AIM9P40053 627 aaKnown RBP2.4□□□□□ -2.02
SEC16YPL085W IAH1P41734 238 aa2.4□□□□□ -2.02
SEC16YPL085W CIT3P43635 486 aa2.4□□□□□ -2.02
SEC16YPL085W IDS2P46958 469 aa2.4□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms