RNA–Protein interactions for RNA: YNL007C

SIS1, Transcript of Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p, yeast

Gene SIS1, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS1	YNL007C	OXR1	Q08952	273 aa		13.79	□□□□□ -0.2
SIS1	YNL007C	CYC8	P14922	966 aa		13.78	□□□□□ -0.2
SIS1	YNL007C	PSY4	P38193	441 aa		13.78	□□□□□ -0.2
SIS1	YNL007C	YGR273C	P53329	174 aa		13.78	□□□□□ -0.2
SIS1	YNL007C	GSY1	P23337	708 aa		13.77	□□□□□ -0.21
SIS1	YNL007C	ADE17	P38009	592 aa	Known RBP	13.77	□□□□□ -0.21
SIS1	YNL007C	NDT80	P38830	627 aa		13.77	□□□□□ -0.21
SIS1	YNL007C	FMS1	P50264	508 aa		13.77	□□□□□ -0.21
SIS1	YNL007C	AIM33	Q04516	312 aa		13.77	□□□□□ -0.21
SIS1	YNL007C	GFD1	Q04839	188 aa	Known RBP	13.77	□□□□□ -0.21
SIS1	YNL007C	SRO9	P25567	434 aa	Known RBP	13.76	□□□□□ -0.21
SIS1	YNL007C	PAH1	P32567	862 aa		13.76	□□□□□ -0.21
SIS1	YNL007C	IXR1	P33417	597 aa		13.76	□□□□□ -0.21
SIS1	YNL007C	SUL1	P38359	859 aa		13.76	□□□□□ -0.21
SIS1	YNL007C	ERG7	P38604	731 aa		13.76	□□□□□ -0.21
SIS1	YNL007C	PAN5	P38787	379 aa		13.76	□□□□□ -0.21
SIS1	YNL007C	ADY4	Q05955	493 aa		13.76	□□□□□ -0.21
SIS1	YNL007C	SUB2	Q07478	446 aa	Known RBP	13.76	□□□□□ -0.21
SIS1	YNL007C	PET10	P36139	283 aa		13.75	□□□□□ -0.21
SIS1	YNL007C	PSF2	P40359	213 aa		13.75	□□□□□ -0.21
SIS1	YNL007C	THI6	P41835	540 aa		13.75	□□□□□ -0.21
SIS1	YNL007C	VTC2	P43585	828 aa		13.75	□□□□□ -0.21
SIS1	YNL007C	NET1	P47035	1189 aa		13.75	□□□□□ -0.21
SIS1	YNL007C	ULP1	Q02724	621 aa		13.75	□□□□□ -0.21
SIS1	YNL007C	TLG2	Q08144	397 aa		13.75	□□□□□ -0.21
SIS1	YNL007C	TMA16	Q08687	178 aa		13.75	□□□□□ -0.21
SIS1	YNL007C	FOB1	O13329	566 aa		13.74	□□□□□ -0.21
SIS1	YNL007C	OCT1	P35999	772 aa		13.74	□□□□□ -0.21
SIS1	YNL007C	GAA1	P39012	614 aa		13.74	□□□□□ -0.21
SIS1	YNL007C	MGA2	P40578	1113 aa		13.74	□□□□□ -0.21
SIS1	YNL007C	YML037C	Q03703	340 aa		13.74	□□□□□ -0.21
SIS1	YNL007C	YLH47	Q06493	454 aa		13.74	□□□□□ -0.21
SIS1	YNL007C	SMC6	Q12749	1114 aa		13.74	□□□□□ -0.21
SIS1	YNL007C	CDC37	P06101	506 aa	Known RBP	13.73	□□□□□ -0.21
SIS1	YNL007C	RAD18	P10862	487 aa		13.73	□□□□□ -0.21
SIS1	YNL007C	YKR023W	P36119	530 aa	Known RBP	13.73	□□□□□ -0.21
SIS1	YNL007C	YGR237C	P50089	785 aa		13.73	□□□□□ -0.21
SIS1	YNL007C	CBK1	P53894	756 aa		13.73	□□□□□ -0.21
SIS1	YNL007C	CTR9	P89105	1077 aa		13.73	□□□□□ -0.21
SIS1	YNL007C	BUL2	Q03758	920 aa	Known RBP	13.73	□□□□□ -0.21
SIS1	YNL007C	ILV1	P00927	576 aa	Known RBP	13.72	□□□□□ -0.21
SIS1	YNL007C	MFM1	Q02783	413 aa		13.72	□□□□□ -0.21
SIS1	YNL007C	FBP1	P09201	348 aa		13.71	□□□□□ -0.21
SIS1	YNL007C	CKA2	P19454	339 aa		13.71	□□□□□ -0.21
SIS1	YNL007C	YDJ1	P25491	409 aa	Known RBP	13.71	□□□□□ -0.21
SIS1	YNL007C	MFT1	P33441	392 aa	Known RBP	13.71	□□□□□ -0.21
SIS1	YNL007C	PHO88	P38264	188 aa	Predicted RBP	13.71	□□□□□ -0.21
SIS1	YNL007C	BCD1	P38772	366 aa		13.71	□□□□□ -0.21
SIS1	YNL007C	ATG1	P53104	897 aa		13.71	□□□□□ -0.21
SIS1	YNL007C	LSC2	P53312	427 aa		13.71	□□□□□ -0.21
SIS1	YNL007C	SPP382	Q06411	708 aa	Predicted RBP	13.71	□□□□□ -0.21
SIS1	YNL007C	CFT2	Q12102	859 aa	Predicted RBP	13.71	□□□□□ -0.21
SIS1	YNL007C	MSH3	P25336	1018 aa		13.7	□□□□□ -0.22
SIS1	YNL007C	PSO2	P30620	661 aa		13.7	□□□□□ -0.22
SIS1	YNL007C	MCD4	P36051	919 aa		13.7	□□□□□ -0.22
SIS1	YNL007C	SAP190	P36123	1033 aa		13.7	□□□□□ -0.22
SIS1	YNL007C	ESC2	Q06340	456 aa		13.7	□□□□□ -0.22
SIS1	YNL007C	MIP1	P15801	1254 aa		13.69	□□□□□ -0.22
SIS1	YNL007C	ISW1	P38144	1129 aa		13.69	□□□□□ -0.22
SIS1	YNL007C	OYE2	Q03558	400 aa	Known RBP	13.69	□□□□□ -0.22
SIS1	YNL007C	ARP6	Q12509	438 aa		13.69	□□□□□ -0.22
SIS1	YNL007C	PDC1	P06169	563 aa	Known RBP	13.68	□□□□□ -0.22
SIS1	YNL007C	YEL076C-A	P0CX16	216 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	YLR464W	P0CX17	216 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	ISY1	P21374	235 aa	Predicted RBP	13.68	□□□□□ -0.22
SIS1	YNL007C	MRC1	P25588	1096 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	UGA4	P32837	571 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	YET1	P35723	206 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	MNR2	P35724	969 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	SPT8	P38915	602 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	YEL076C	P39971	216 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	VAB2	P40003	282 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	YJL007C	P47080	104 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	LIF1	P53150	421 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	VPS75	P53853	264 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	ORC4	P54791	529 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	EBS1	Q03466	884 aa	Known RBP	13.68	□□□□□ -0.22
SIS1	YNL007C	RKM4	Q12504	494 aa		13.68	□□□□□ -0.22
SIS1	YNL007C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	13.67	□□□□□ -0.22	not detected
SIS1	YNL007C	SAM1	P10659	382 aa	Known RBP	13.67	□□□□□ -0.22
SIS1	YNL007C	CDC60	P26637	1090 aa	Known RBP	13.67	□□□□□ -0.22
SIS1	YNL007C	RAM2	P29703	316 aa		13.67	□□□□□ -0.22
SIS1	YNL007C	MNN4	P36044	1178 aa		13.67	□□□□□ -0.22
SIS1	YNL007C	ROG3	P43602	733 aa		13.67	□□□□□ -0.22
SIS1	YNL007C	TMA64	Q04600	565 aa	Known RBP	13.67	□□□□□ -0.22
SIS1	YNL007C	TY3A-G	Q12173	290 aa		13.67	□□□□□ -0.22
SIS1	YNL007C	TY3A-I	Q99219	290 aa		13.67	□□□□□ -0.22
SIS1	YNL007C	PER1	P25625	357 aa		13.66	□□□□□ -0.22
SIS1	YNL007C	YKL091C	P33324	310 aa	Known RBP	13.66	□□□□□ -0.22
SIS1	YNL007C	PGA2	P53903	129 aa		13.66	□□□□□ -0.22
SIS1	YNL007C	YPR117W	Q06116	2489 aa		13.65	□□□□□ -0.22
SIS1	YNL007C	SEC65	P29478	273 aa		13.65	□□□□□ -0.22
SIS1	YNL007C	TGL1	P34163	548 aa		13.65	□□□□□ -0.22
SIS1	YNL007C	CTM1	P38818	585 aa		13.65	□□□□□ -0.22
SIS1	YNL007C	AIP1	P46680	615 aa	Known RBP	13.65	□□□□□ -0.22
SIS1	YNL007C	FYV8	P46949	817 aa	Known RBP	13.65	□□□□□ -0.22
SIS1	YNL007C	UBX5	Q06682	500 aa		13.65	□□□□□ -0.22
SIS1	YNL007C	YOL075C	Q08234	1294 aa		13.65	□□□□□ -0.22
SIS1	YNL007C	YPL216W	Q08964	1102 aa		13.65	□□□□□ -0.22
SIS1	YNL007C	OM45	P16547	393 aa		13.64	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms