RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W NOP2P40991 618 aaKnown RBP6.14□□□□□ -1.43
ROT1YMR200W YJL045WP47052 634 aa6.14□□□□□ -1.43
ROT1YMR200W ORC3P54790 616 aa6.14□□□□□ -1.43
ROT1YMR200W RPN4Q03465 531 aa6.14□□□□□ -1.43
ROT1YMR200W WRS1Q12109 432 aaKnown RBP6.14□□□□□ -1.43
ROT1YMR200W YGR161W-CQ3E744 92 aa6.14□□□□□ -1.43
ROT1YMR200W ADD66P36040 267 aa6.13□□□□□ -1.43
ROT1YMR200W YGR122WP53272 402 aa6.13□□□□□ -1.43
ROT1YMR200W CDC53Q12018 815 aaKnown RBP6.13□□□□□ -1.43
ROT1YMR200W STI1P15705 589 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
ROT1YMR200W GAS1P22146 559 aaKnown RBP6.12□□□□□ -1.43
ROT1YMR200W TSA1P34760 196 aaKnown RBP6.12□□□□□ -1.43
ROT1YMR200W PBP2P38151 413 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
ROT1YMR200W YHL012WP38709 493 aa6.12□□□□□ -1.43
ROT1YMR200W HSE1P38753 452 aa6.12□□□□□ -1.43
ROT1YMR200W QNS1P38795 714 aaKnown RBP6.12□□□□□ -1.43
ROT1YMR200W YJL049WP47048 450 aa6.12□□□□□ -1.43
ROT1YMR200W VPS16Q03308 798 aa6.12□□□□□ -1.43
ROT1YMR200W RKM2Q03942 479 aa6.12□□□□□ -1.43
ROT1YMR200W LAP2Q10740 671 aa6.12□□□□□ -1.43
ROT1YMR200W YOR131CQ12486 218 aa6.12□□□□□ -1.43
ROT1YMR200W ATG14P38270 344 aa6.11□□□□□ -1.43
ROT1YMR200W MNN1P39106 762 aa6.11□□□□□ -1.43
ROT1YMR200W EST2Q06163 884 aa6.11□□□□□ -1.43
ROT1YMR200W CDA2Q06703 312 aa6.11□□□□□ -1.43
ROT1YMR200W HRK1Q08732 759 aaKnown RBP6.11□□□□□ -1.43
ROT1YMR200W PIN2Q12057 282 aa6.11□□□□□ -1.43
ROT1YMR200W SSF2Q12153 453 aaPredicted RBP6.11□□□□□ -1.43
ROT1YMR200W DED1P06634 604 aaKnown RBP6.1□□□□□ -1.43
ROT1YMR200W PRE9P23638 258 aaKnown RBP6.1□□□□□ -1.43
ROT1YMR200W MCM2P29469 868 aa6.1□□□□□ -1.43
ROT1YMR200W GRX7P38068 203 aa6.1□□□□□ -1.43
ROT1YMR200W RPS26AP39938 119 aaKnown RBP6.1□□□□□ -1.43
ROT1YMR200W RPS26BP39939 119 aaKnown RBP6.1□□□□□ -1.43
ROT1YMR200W BUD6P41697 788 aa6.1□□□□□ -1.43
ROT1YMR200W YJR142WP47173 342 aa6.1□□□□□ -1.43
ROT1YMR200W YGL081WP53156 320 aa6.1□□□□□ -1.43
ROT1YMR200W ECM16Q04217 1267 aaKnown RBP6.1□□□□□ -1.43
ROT1YMR200W YDL121CQ07541 149 aa6.1□□□□□ -1.43
ROT1YMR200W YDL177CQ12257 170 aa6.1□□□□□ -1.43
ROT1YMR200W RAD2P07276 1031 aa6.09□□□□□ -1.43
ROT1YMR200W CYC8P14922 966 aa6.09□□□□□ -1.43
ROT1YMR200W GAL11P19659 1081 aa6.09□□□□□ -1.43
ROT1YMR200W CLN2P20438 545 aa6.09□□□□□ -1.43
ROT1YMR200W NIT1P40447 199 aa6.09□□□□□ -1.43
ROT1YMR200W HDA2Q06629 674 aa6.09□□□□□ -1.43
ROT1YMR200W MET6P05694 767 aaKnown RBP6.08□□□□□ -1.44
ROT1YMR200W MNN4P36044 1178 aa6.08□□□□□ -1.44
ROT1YMR200W AIM21P40563 679 aa6.08□□□□□ -1.44
ROT1YMR200W SPR28Q04921 423 aa6.08□□□□□ -1.44
ROT1YMR200W MCD1Q12158 566 aa6.08□□□□□ -1.44
ROT1YMR200W KAR1P11927 433 aa6.07□□□□□ -1.44
ROT1YMR200W RPA135P22138 1203 aaKnown RBP6.07□□□□□ -1.44
ROT1YMR200W GPB2P39717 880 aa6.07□□□□□ -1.44
ROT1YMR200W UBP5P39944 805 aa6.07□□□□□ -1.44
ROT1YMR200W MRPS18P42847 217 aa6.07□□□□□ -1.44
ROT1YMR200W TY4A-JP47023 414 aa6.07□□□□□ -1.44
ROT1YMR200W VPS53P47061 822 aa6.07□□□□□ -1.44
ROT1YMR200W ROD1Q02805 837 aa6.07□□□□□ -1.44
ROT1YMR200W BDF2Q07442 638 aa6.07□□□□□ -1.44
ROT1YMR200W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
ROT1YMR200W KIP1P28742 1111 aa6.06□□□□□ -1.44
ROT1YMR200W PEP7P32609 515 aa6.06□□□□□ -1.44
ROT1YMR200W YSC84P32793 468 aa6.06□□□□□ -1.44
ROT1YMR200W MDL2P33311 773 aa6.06□□□□□ -1.44
ROT1YMR200W ALG3P38179 458 aa6.06□□□□□ -1.44
ROT1YMR200W ETP1P38748 585 aaKnown RBP6.06□□□□□ -1.44
ROT1YMR200W ERP2P39704 215 aa6.06□□□□□ -1.44
ROT1YMR200W GNP1P48813 663 aa6.06□□□□□ -1.44
ROT1YMR200W PRP43P53131 767 aaKnown RBP6.06□□□□□ -1.44
ROT1YMR200W RAT1Q02792 1006 aaKnown RBP6.06□□□□□ -1.44
ROT1YMR200W BRE1Q07457 700 aaKnown RBP6.06□□□□□ -1.44
ROT1YMR200W RCL1Q08096 367 aaPredicted RBP6.06□□□□□ -1.44
ROT1YMR200W UBP12P39538 1254 aa6.05□□□□□ -1.44
ROT1YMR200W YEN1P40028 759 aa6.05□□□□□ -1.44
ROT1YMR200W UTP14Q04500 899 aaKnown RBP6.05□□□□□ -1.44
ROT1YMR200W TMA64Q04600 565 aaKnown RBP6.05□□□□□ -1.44
ROT1YMR200W PTC5Q12511 572 aa6.05□□□□□ -1.44
ROT1YMR200W TAF13P11747 167 aa6.04□□□□□ -1.44
ROT1YMR200W SRO9P25567 434 aaKnown RBP6.04□□□□□ -1.44
ROT1YMR200W SEC6P32844 805 aa6.04□□□□□ -1.44
ROT1YMR200W AIM26P32858 118 aa6.04□□□□□ -1.44
ROT1YMR200W HXT13P39924 564 aa6.04□□□□□ -1.44
ROT1YMR200W HXT17P53631 564 aa6.04□□□□□ -1.44
ROT1YMR200W CWC24P53769 259 aa6.04□□□□□ -1.44
ROT1YMR200W HXT15P54854 567 aa6.04□□□□□ -1.44
ROT1YMR200W RMD1Q03441 430 aa6.04□□□□□ -1.44
ROT1YMR200W ESF1Q06344 628 aaKnown RBP6.04□□□□□ -1.44
ROT1YMR200W MKK2P32491 506 aa6.03□□□□□ -1.44
ROT1YMR200W SIW14P53965 281 aa6.03□□□□□ -1.44
ROT1YMR200W NUP82P40368 713 aa6.02□□□□□ -1.45
ROT1YMR200W DNM1P54861 757 aa6.02□□□□□ -1.45
ROT1YMR200W MRL1Q06815 381 aa6.02□□□□□ -1.45
ROT1YMR200W RSC58Q07979 502 aa6.02□□□□□ -1.45
ROT1YMR200W GCR1P07261 785 aa6.01□□□□□ -1.45
ROT1YMR200W THI80P35202 319 aa6.01□□□□□ -1.45
ROT1YMR200W MPE1P35728 441 aaKnown RBP6.01□□□□□ -1.45
ROT1YMR200W HUL5P53119 910 aa6.01□□□□□ -1.45
ROT1YMR200W MRPL22P53881 309 aa6.01□□□□□ -1.45
ROT1YMR200W CEF1Q03654 590 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 64 ms