RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C CSC1Q06538 782 aa2.86□□□□□ -1.95
SGS1YMR190C MYO1P08964 1928 aa2.86□□□□□ -1.95
SGS1YMR190C DBP1P24784 617 aaKnown RBP2.86□□□□□ -1.95
SGS1YMR190C SAS3P34218 831 aa2.86□□□□□ -1.95
SGS1YMR190C SHE3P38272 425 aaKnown RBP2.86□□□□□ -1.95
SGS1YMR190C YJR061WP40355 935 aa2.86□□□□□ -1.95
SGS1YMR190C DAN4P47179 1161 aa2.86□□□□□ -1.95
SGS1YMR190C ZPR1P53303 486 aaKnown RBP2.86□□□□□ -1.95
SGS1YMR190C KEL3Q08979 651 aaPredicted RBP2.86□□□□□ -1.95
SGS1YMR190C POX1P13711 748 aa2.86□□□□□ -1.95
SGS1YMR190C RPS7AP26786 190 aaKnown RBP2.86□□□□□ -1.95
SGS1YMR190C POT1P27796 417 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
SGS1YMR190C SWC3P31376 625 aa2.86□□□□□ -1.95
SGS1YMR190C NUP133P36161 1157 aa2.86□□□□□ -1.95
SGS1YMR190C NAB3P38996 802 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
SGS1YMR190C PSP1P50896 841 aaKnown RBP2.86□□□□□ -1.95
SGS1YMR190C NEM1P38757 446 aa2.85□□□□□ -1.95
SGS1YMR190C YHR202WP38887 602 aa2.85□□□□□ -1.95
SGS1YMR190C TAF1P46677 1066 aa2.85□□□□□ -1.95
SGS1YMR190C YJL171CP46992 396 aa2.85□□□□□ -1.95
SGS1YMR190C ITC1P53125 1264 aa2.85□□□□□ -1.95
SGS1YMR190C CSL4P53859 292 aaPredicted RBP2.85□□□□□ -1.95
SGS1YMR190C PEX19Q07418 342 aa2.85□□□□□ -1.95
SGS1YMR190C SMC5Q08204 1093 aa2.85□□□□□ -1.95
SGS1YMR190C SSF2Q12153 453 aaPredicted RBP2.85□□□□□ -1.95
SGS1YMR190C MIP1P15801 1254 aa2.85□□□□□ -1.95
SGS1YMR190C YKL050CP35736 922 aa2.85□□□□□ -1.95
SGS1YMR190C ECM21P38167 1117 aaKnown RBP2.85□□□□□ -1.95
SGS1YMR190C AIM23P47015 356 aa2.85□□□□□ -1.95
SGS1YMR190C PEX29Q03370 554 aa2.85□□□□□ -1.95
SGS1YMR190C NOT3P06102 836 aaKnown RBP2.85□□□□□ -1.95
SGS1YMR190C MSS51P32335 436 aa2.85□□□□□ -1.95
SGS1YMR190C SAF1P38352 637 aa2.85□□□□□ -1.95
SGS1YMR190C PNT1P38969 423 aa2.85□□□□□ -1.95
SGS1YMR190C STM1P39015 273 aaKnown RBP2.85□□□□□ -1.95
SGS1YMR190C AIM9P40053 627 aaKnown RBP2.85□□□□□ -1.95
SGS1YMR190C VPS25P47142 202 aa2.85□□□□□ -1.95
SGS1YMR190C CUP1-1P0CX80 61 aa2.84□□□□□ -1.95
SGS1YMR190C CUP1-2P0CX81 61 aa2.84□□□□□ -1.95
SGS1YMR190C CAF20P12962 161 aaKnown RBP2.84□□□□□ -1.95
SGS1YMR190C PRE8P23639 250 aa2.84□□□□□ -1.95
SGS1YMR190C YUR1P26725 428 aa2.84□□□□□ -1.95
SGS1YMR190C SFP1P32432 683 aa2.84□□□□□ -1.95
SGS1YMR190C YAP1801P38856 637 aa2.84□□□□□ -1.95
SGS1YMR190C VPS8P39702 1274 aa2.84□□□□□ -1.95
SGS1YMR190C YJL070CP40361 888 aa2.84□□□□□ -1.95
SGS1YMR190C SHE10P53075 577 aa2.84□□□□□ -1.95
SGS1YMR190C NOP13P53883 403 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
SGS1YMR190C KRE33P53914 1056 aaKnown RBP2.84□□□□□ -1.95
SGS1YMR190C ALO1P54783 526 aaKnown RBP2.84□□□□□ -1.95
SGS1YMR190C SNF7P39929 240 aaKnown RBP2.84□□□□□ -1.95
SGS1YMR190C AZR1P50080 613 aa2.84□□□□□ -1.95
SGS1YMR190C YGL242CP53066 181 aa2.84□□□□□ -1.95
SGS1YMR190C MRPS35P53292 345 aa2.84□□□□□ -1.95
SGS1YMR190C HAP5Q02516 242 aa2.84□□□□□ -1.95
SGS1YMR190C MRI1Q06489 411 aaKnown RBP2.84□□□□□ -1.95
SGS1YMR190C GYP5Q12344 894 aa2.84□□□□□ -1.95
SGS1YMR190C MEX67Q99257 599 aaKnown RBP2.84□□□□□ -1.95
SGS1YMR190C SRM1P21827 482 aa2.84□□□□□ -1.95
SGS1YMR190C GLO3P38682 493 aaKnown RBP2.84□□□□□ -1.95
SGS1YMR190C PPX1P38698 397 aa2.84□□□□□ -1.95
SGS1YMR190C RTS1P38903 757 aa2.84□□□□□ -1.95
SGS1YMR190C DSN1P40568 576 aa2.84□□□□□ -1.95
SGS1YMR190C ADY4Q05955 493 aa2.84□□□□□ -1.95
SGS1YMR190C YDL073WQ07454 984 aa2.84□□□□□ -1.95
SGS1YMR190C SRO9P25567 434 aaKnown RBP2.84□□□□□ -1.96
SGS1YMR190C TYE7P33122 291 aaPredicted RBP2.84□□□□□ -1.96
SGS1YMR190C HXT13P39924 564 aa2.84□□□□□ -1.96
SGS1YMR190C TIF4631P39935 952 aaKnown RBP2.84□□□□□ -1.96
SGS1YMR190C YEL025CP39991 1188 aa2.84□□□□□ -1.96
SGS1YMR190C FMP10P40098 244 aa2.84□□□□□ -1.96
SGS1YMR190C FYV10P40492 516 aa2.84□□□□□ -1.96
SGS1YMR190C HXT17P53631 564 aa2.84□□□□□ -1.96
SGS1YMR190C CAF120P53836 1060 aa2.84□□□□□ -1.96
SGS1YMR190C YLR455WQ06188 304 aa2.84□□□□□ -1.96
SGS1YMR190C APL5Q08951 932 aaKnown RBP2.84□□□□□ -1.96
SGS1YMR190C DRE2P36152 348 aa2.83□□□□□ -1.96
SGS1YMR190C HYR1P40581 163 aaKnown RBP2.83□□□□□ -1.96
SGS1YMR190C YNL034WP53963 612 aa2.83□□□□□ -1.96
SGS1YMR190C YNL018CP53976 612 aa2.83□□□□□ -1.96
SGS1YMR190C SUR7P54003 302 aa2.83□□□□□ -1.96
SGS1YMR190C IRC4Q03036 179 aa2.83□□□□□ -1.96
SGS1YMR190C FCP1Q03254 732 aa2.83□□□□□ -1.96
SGS1YMR190C PKH3Q03306 898 aaPredicted RBP2.83□□□□□ -1.96
SGS1YMR190C RIM20Q12033 661 aa2.83□□□□□ -1.96
SGS1YMR190C RLF2Q12495 606 aa2.83□□□□□ -1.96
SGS1YMR190C SNF1P06782 633 aaKnown RBP2.83□□□□□ -1.96
SGS1YMR190C VID28P40547 921 aa2.83□□□□□ -1.96
SGS1YMR190C MTC3P53077 123 aa2.83□□□□□ -1.96
SGS1YMR190C CUS1Q02554 436 aaPredicted RBP2.83□□□□□ -1.96
SGS1YMR190C SLD5Q03406 294 aa2.83□□□□□ -1.96
SGS1YMR190C MAG2Q06436 670 aaKnown RBP2.83□□□□□ -1.96
SGS1YMR190C UBX5Q06682 500 aa2.83□□□□□ -1.96
SGS1YMR190C CLP1Q08685 445 aaPredicted RBP2.83□□□□□ -1.96
SGS1YMR190C RRD2Q12461 358 aa2.83□□□□□ -1.96
SGS1YMR190C FKS1P38631 1876 aaKnown RBP2.83□□□□□ -1.96
SGS1YMR190C ROX1P25042 368 aa2.83□□□□□ -1.96
SGS1YMR190C BDH2P39713 417 aa2.83□□□□□ -1.96
SGS1YMR190C UTP7P40055 554 aaKnown RBP2.83□□□□□ -1.96
SGS1YMR190C VPS72Q03388 795 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms