RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C PPM2Q08282 695 aa2.6□□□□□ -1.99
VPS13YLL040C HIF1Q12373 385 aa2.6□□□□□ -1.99
VPS13YLL040C YKL023WP36103 277 aaKnown RBP2.6□□□□□ -1.99
VPS13YLL040C PXR1P53335 271 aaPredicted RBP2.6□□□□□ -1.99
VPS13YLL040C YOL019WQ08157 551 aa2.6□□□□□ -1.99
VPS13YLL040C PMR1P13586 950 aa2.59□□□□□ -1.99
VPS13YLL040C MCM4P30665 933 aaKnown RBP2.59□□□□□ -1.99
VPS13YLL040C SAP185P40856 1058 aa2.59□□□□□ -1.99
VPS13YLL040C GGA1Q06336 557 aa2.59□□□□□ -1.99
VPS13YLL040C TOP1P04786 769 aa2.59□□□□□ -1.99
VPS13YLL040C STE6P12866 1290 aa2.59□□□□□ -1.99
VPS13YLL040C NAT1P12945 854 aaKnown RBP2.59□□□□□ -1.99
VPS13YLL040C ILM1P47155 203 aa2.59□□□□□ -1.99
VPS13YLL040C ERO1Q03103 563 aa2.59□□□□□ -1.99
VPS13YLL040C ATG13Q06628 738 aa2.59□□□□□ -1.99
VPS13YLL040C NCA2Q12374 616 aa2.59□□□□□ -1.99
VPS13YLL040C PRT1P06103 763 aaKnown RBP2.59□□□□□ -1.99
VPS13YLL040C TAN1P53072 289 aaPredicted RBP2.59□□□□□ -1.99
VPS13YLL040C SEN54Q02825 467 aaPredicted RBP2.59□□□□□ -1.99
VPS13YLL040C SPO19Q03029 223 aa2.59□□□□□ -1.99
VPS13YLL040C ECI1Q05871 280 aa2.59□□□□□ -1.99
VPS13YLL040C TIF1P10081 395 aaKnown RBP2.59□□□□□ -1.99
VPS13YLL040C PFF1P38244 976 aa2.59□□□□□ -1.99
VPS13YLL040C YGR237CP50089 785 aa2.59□□□□□ -1.99
VPS13YLL040C RAD57P25301 460 aa2.59□□□□□ -1.99
VPS13YLL040C KTR2P33550 425 aa2.59□□□□□ -1.99
VPS13YLL040C MIP6P38760 659 aaKnown RBP2.59□□□□□ -1.99
VPS13YLL040C PUS2P53167 370 aa2.59□□□□□ -1.99
VPS13YLL040C BUL2Q03758 920 aaKnown RBP2.59□□□□□ -1.99
VPS13YLL040C DON1Q05610 365 aa2.59□□□□□ -1.99
VPS13YLL040C DCD1P06773 312 aa2.59□□□□□ -2
VPS13YLL040C FUN12P39730 1002 aaKnown RBP2.59□□□□□ -2
VPS13YLL040C UBP15P50101 1230 aa2.59□□□□□ -2
VPS13YLL040C MSB4Q12317 492 aa2.59□□□□□ -2
VPS13YLL040C YOR111WQ99210 232 aa2.59□□□□□ -2
VPS13YLL040C PRP45P28004 379 aaPredicted RBP2.59□□□□□ -2
VPS13YLL040C ANP1P32629 500 aa2.59□□□□□ -2
VPS13YLL040C TRM2P33753 639 aa2.59□□□□□ -2
VPS13YLL040C DID4P36108 232 aa2.59□□□□□ -2
VPS13YLL040C YIL001WP40560 513 aa2.59□□□□□ -2
VPS13YLL040C SAD1P43589 448 aa2.59□□□□□ -2
VPS13YLL040C ALE1Q08548 619 aa2.59□□□□□ -2
VPS13YLL040C DIP2Q12220 943 aaPredicted RBP2.59□□□□□ -2
VPS13YLL040C PTK2P47116 818 aaKnown RBP2.59□□□□□ -2
VPS13YLL040C NMA2P53204 395 aa2.59□□□□□ -2
VPS13YLL040C YGR122WP53272 402 aa2.59□□□□□ -2
VPS13YLL040C COQ1P18900 473 aa2.58□□□□□ -2
VPS13YLL040C PRK1P40494 810 aa2.58□□□□□ -2
VPS13YLL040C SPO21Q12411 609 aa2.58□□□□□ -2
VPS13YLL040C PTC5Q12511 572 aa2.58□□□□□ -2
VPS13YLL040C GSY1P23337 708 aa2.58□□□□□ -2
VPS13YLL040C MIG2P53035 382 aa2.58□□□□□ -2
VPS13YLL040C ALD6P54115 500 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C HIS4P00815 799 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C KAR3P17119 729 aa2.58□□□□□ -2
VPS13YLL040C RPC53P25441 422 aa2.58□□□□□ -2
VPS13YLL040C YGL140CP53120 1219 aa2.58□□□□□ -2
VPS13YLL040C RPN7Q06103 429 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C YAP7Q08182 245 aa2.58□□□□□ -2
VPS13YLL040C TY1B-AO13527 1196 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C PPR1P07272 904 aaPredicted RBP2.58□□□□□ -2
VPS13YLL040C HOS4P40480 1083 aa2.58□□□□□ -2
VPS13YLL040C FYV8P46949 817 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C NUT1P53114 1132 aa2.58□□□□□ -2
VPS13YLL040C SOL4P53315 255 aa2.58□□□□□ -2
VPS13YLL040C ATG16Q03818 150 aa2.58□□□□□ -2
VPS13YLL040C ACK1Q07622 623 aaPredicted RBP2.58□□□□□ -2
VPS13YLL040C TMA16Q08687 178 aa2.58□□□□□ -2
VPS13YLL040C TRS33Q99394 268 aa2.58□□□□□ -2
VPS13YLL040C YMC2P38087 329 aa2.58□□□□□ -2
VPS13YLL040C OYE2Q03558 400 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C NOB1Q08444 459 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C VMA4P22203 233 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C NAM7P30771 971 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C TOS1P38288 455 aa2.58□□□□□ -2
VPS13YLL040C AKR1P39010 764 aa2.58□□□□□ -2
VPS13YLL040C MFM1Q02783 413 aa2.58□□□□□ -2
VPS13YLL040C IMH1Q06704 911 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C CMS1Q07897 291 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C FRD1P32614 470 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C SPT8P38915 602 aa2.58□□□□□ -2
VPS13YLL040C YJL171CP46992 396 aa2.58□□□□□ -2
VPS13YLL040C SDA1P53313 767 aaKnown RBP2.58□□□□□ -2
VPS13YLL040C YDL073WQ07454 984 aa2.58□□□□□ -2
VPS13YLL040C PDB1P32473 366 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C YNL193WP53870 558 aa2.57□□□□□ -2
VPS13YLL040C CSR1Q06705 408 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C SNX3Q08826 162 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C PRP22P24384 1145 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C SRL3P36167 246 aa2.57□□□□□ -2
VPS13YLL040C ERT1P38140 529 aa2.57□□□□□ -2
VPS13YLL040C TOF1P53840 1238 aa2.57□□□□□ -2
VPS13YLL040C GIS3Q12418 502 aa2.57□□□□□ -2
VPS13YLL040C KDX1P36005 433 aa2.57□□□□□ -2
VPS13YLL040C LAS1P36146 502 aaPredicted RBP2.57□□□□□ -2
VPS13YLL040C STT3P39007 718 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C YAP5P40574 245 aa2.57□□□□□ -2
VPS13YLL040C PRP31P49704 494 aaPredicted RBP2.57□□□□□ -2
VPS13YLL040C FCP1Q03254 732 aa2.57□□□□□ -2
VPS13YLL040C NBL1Q3E7Y6 73 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms