RNA–Protein interactions for RNA: YKR097W

PCK1, Transcript of Phosphoenolpyruvate carboxykinase, yeast

Gene PCK1, Length 1,650 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCK1	YKR097W	CYC7	P00045	113 aa		4.09	□□□□□ -1.76
PCK1	YKR097W	TRP3	P00937	484 aa		4.09	□□□□□ -1.76
PCK1	YKR097W	RAD4	P14736	754 aa		4.09	□□□□□ -1.76
PCK1	YKR097W	MLS1	P30952	554 aa		4.09	□□□□□ -1.76
PCK1	YKR097W	NNK1	P36003	928 aa		4.09	□□□□□ -1.76
PCK1	YKR097W	GPT2	P36148	743 aa		4.09	□□□□□ -1.76
PCK1	YKR097W	YBR184W	P38299	523 aa		4.09	□□□□□ -1.76
PCK1	YKR097W	RGD1	P38339	666 aa		4.09	□□□□□ -1.76
PCK1	YKR097W	HSE1	P38753	452 aa		4.09	□□□□□ -1.76
PCK1	YKR097W	MSH4	P40965	878 aa	Predicted RBP	4.09	□□□□□ -1.76
PCK1	YKR097W	HUL5	P53119	910 aa		4.09	□□□□□ -1.76
PCK1	YKR097W	NAN1	Q02931	896 aa	Known RBP	4.09	□□□□□ -1.76
PCK1	YKR097W	RSA3	Q05942	220 aa	Known RBP	4.09	□□□□□ -1.76
PCK1	YKR097W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
PCK1	YKR097W	SMY2	P32909	740 aa	Known RBP	4.08	□□□□□ -1.76
PCK1	YKR097W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
PCK1	YKR097W	YKR073C	P36153	106 aa		4.08	□□□□□ -1.76
PCK1	YKR097W	YHR020W	P38708	688 aa	Known RBP	4.08	□□□□□ -1.76
PCK1	YKR097W	IRR1	P40541	1150 aa		4.08	□□□□□ -1.76
PCK1	YKR097W	BUD6	P41697	788 aa		4.08	□□□□□ -1.76
PCK1	YKR097W	YGL176C	P46945	554 aa		4.08	□□□□□ -1.76
PCK1	YKR097W	CDC53	Q12018	815 aa	Known RBP	4.08	□□□□□ -1.76
PCK1	YKR097W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
PCK1	YKR097W	YKL091C	P33324	310 aa	Known RBP	4.07	□□□□□ -1.76
PCK1	YKR097W	MRP8	P35719	219 aa		4.07	□□□□□ -1.76
PCK1	YKR097W	MCM7	P38132	845 aa		4.07	□□□□□ -1.76
PCK1	YKR097W	MMM1	P41800	426 aa		4.07	□□□□□ -1.76
PCK1	YKR097W	HNT2	P49775	206 aa		4.07	□□□□□ -1.76
PCK1	YKR097W	ALT1	P52893	592 aa		4.07	□□□□□ -1.76
PCK1	YKR097W	YLR257W	Q06146	321 aa	Known RBP	4.07	□□□□□ -1.76
PCK1	YKR097W	YOR059C	Q08448	450 aa	Known RBP	4.07	□□□□□ -1.76
PCK1	YKR097W	NFS1	P25374	497 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	KIP1	P28742	1111 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	YKL107W	P34251	309 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	SIP5	P40210	489 aa	Known RBP	4.06	□□□□□ -1.76
PCK1	YKR097W	PFD1	P46988	109 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	YPL260W	Q08977	551 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	CIT2	P08679	460 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	YER152C	P10356	443 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	RPL8B	P29453	256 aa	Known RBP	4.06	□□□□□ -1.76
PCK1	YKR097W	PBY1	P38254	753 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	MBP1	P39678	833 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	CIT3	P43635	486 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	TIM54	P47045	478 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	BRE4	Q07660	1125 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	SPO75	Q07798	868 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	FMP25	Q08023	583 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	PPM2	Q08282	695 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	FLC1	Q08967	793 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	GNT1	Q12096	491 aa		4.06	□□□□□ -1.76
PCK1	YKR097W	RPS4A	P0CX35	261 aa	Known RBP	4.05	□□□□□ -1.76
PCK1	YKR097W	RPS4B	P0CX36	261 aa	Known RBP	4.05	□□□□□ -1.76
PCK1	YKR097W	NMD3	P38861	518 aa	Known RBP	4.05	□□□□□ -1.76
PCK1	YKR097W	SNF7	P39929	240 aa	Known RBP	4.05	□□□□□ -1.76
PCK1	YKR097W	EAR1	Q03212	550 aa		4.05	□□□□□ -1.76
PCK1	YKR097W	DBP2	P24783	546 aa	Known RBP	4.04	□□□□□ -1.76
PCK1	YKR097W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
PCK1	YKR097W	PNT1	P38969	423 aa		4.04	□□□□□ -1.76
PCK1	YKR097W	IRC24	P40580	263 aa		4.04	□□□□□ -1.76
PCK1	YKR097W	SPO21	Q12411	609 aa		4.04	□□□□□ -1.76
PCK1	YKR097W	YOR131C	Q12486	218 aa		4.04	□□□□□ -1.76
PCK1	YKR097W	RPL11A	P0C0W9	174 aa	Known RBP	4.03	□□□□□ -1.76
PCK1	YKR097W	GPB2	P39717	880 aa		4.03	□□□□□ -1.76
PCK1	YKR097W	RSP5	P39940	809 aa	Known RBP	4.03	□□□□□ -1.76
PCK1	YKR097W	RPN3	P40016	523 aa	Known RBP	4.03	□□□□□ -1.76
PCK1	YKR097W	YJL045W	P47052	634 aa		4.03	□□□□□ -1.76
PCK1	YKR097W	YGR125W	P53273	1036 aa		4.03	□□□□□ -1.76
PCK1	YKR097W	UTP8	P53276	713 aa	Known RBP	4.03	□□□□□ -1.76
PCK1	YKR097W	RNH70	P53331	553 aa		4.03	□□□□□ -1.76
PCK1	YKR097W	PUS7	Q08647	676 aa	Known RBP	4.03	□□□□□ -1.76
PCK1	YKR097W	HRK1	Q08732	759 aa	Known RBP	4.03	□□□□□ -1.76
PCK1	YKR097W	OSH2	Q12451	1283 aa		4.03	□□□□□ -1.76
PCK1	YKR097W	RPL11B	Q3E757	174 aa	Predicted RBP	4.03	□□□□□ -1.76
PCK1	YKR097W	NMD2	P38798	1089 aa	Known RBP	4.03	□□□□□ -1.76
PCK1	YKR097W	CHZ1	P40019	153 aa	Predicted RBP	4.03	□□□□□ -1.76
PCK1	YKR097W	OSW7	P43611	510 aa		4.03	□□□□□ -1.76
PCK1	YKR097W	RCM1	P53972	490 aa		4.03	□□□□□ -1.76
PCK1	YKR097W	TPP1	Q03796	238 aa		4.03	□□□□□ -1.76
PCK1	YKR097W	EAF1	Q06337	982 aa		4.03	□□□□□ -1.76
PCK1	YKR097W	CIT1	P00890	479 aa		4.02	□□□□□ -1.77
PCK1	YKR097W	HSP60	P19882	572 aa	Known RBP	4.02	□□□□□ -1.77
PCK1	YKR097W	YSC84	P32793	468 aa		4.02	□□□□□ -1.77
PCK1	YKR097W	WHI3	P34761	661 aa	Known RBP	4.02	□□□□□ -1.77
PCK1	YKR097W	BAP2	P38084	609 aa		4.02	□□□□□ -1.77
PCK1	YKR097W	MXR1	P40029	184 aa		4.02	□□□□□ -1.77
PCK1	YKR097W	ERP6	P53198	216 aa		4.02	□□□□□ -1.77
PCK1	YKR097W	HOS3	Q02959	697 aa	Known RBP	4.02	□□□□□ -1.77
PCK1	YKR097W	SPP382	Q06411	708 aa	Predicted RBP	4.02	□□□□□ -1.77
PCK1	YKR097W	CAN1	P04817	590 aa		4.01	□□□□□ -1.77
PCK1	YKR097W	AVT1	P47082	602 aa		4.01	□□□□□ -1.77
PCK1	YKR097W	CTH1	P47976	325 aa		4.01	□□□□□ -1.77
PCK1	YKR097W	RCL1	Q08096	367 aa	Predicted RBP	4.01	□□□□□ -1.77
PCK1	YKR097W	YVC1	Q12324	675 aa		4.01	□□□□□ -1.77
PCK1	YKR097W	SAM35	P14693	329 aa		4	□□□□□ -1.77
PCK1	YKR097W	SNF5	P18480	905 aa		4	□□□□□ -1.77
PCK1	YKR097W	ARE1	P25628	610 aa		4	□□□□□ -1.77
PCK1	YKR097W	GGA2	P38817	585 aa	Known RBP	4	□□□□□ -1.77
PCK1	YKR097W	GEM1	P39722	662 aa		4	□□□□□ -1.77
PCK1	YKR097W	YFL054C	P43549	646 aa		4	□□□□□ -1.77
PCK1	YKR097W	TAF8	Q03750	510 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms