RNA–Protein interactions for RNA: YKL078W

DHR2, Transcript of Predominantly nucleolar DEAH-box ATP-dependent RNA helicase, yeast

Gene DHR2, Length 2,208 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DHR2	YKL078W	YCF1	P39109	1515 aa	Known RBP	4.97	□□□□□ -1.61
DHR2	YKL078W	MCM7	P38132	845 aa		4.97	□□□□□ -1.61
DHR2	YKL078W	NAM8	Q00539	523 aa	Known RBP	4.97	□□□□□ -1.61
DHR2	YKL078W	SPO71	Q03868	1245 aa		4.97	□□□□□ -1.61
DHR2	YKL078W	TY1A-BL	Q12266	440 aa		4.97	□□□□□ -1.61
DHR2	YKL078W	SCC2	Q04002	1493 aa		4.96	□□□□□ -1.61
DHR2	YKL078W	MRC1	P25588	1096 aa		4.96	□□□□□ -1.62
DHR2	YKL078W	YEN1	P40028	759 aa		4.96	□□□□□ -1.62
DHR2	YKL078W	MPH1	P40562	993 aa		4.96	□□□□□ -1.62
DHR2	YKL078W	SLS1	P42900	643 aa		4.96	□□□□□ -1.62
DHR2	YKL078W	RTA1	P53047	317 aa		4.96	□□□□□ -1.62
DHR2	YKL078W	YNR029C	P53729	429 aa	Known RBP	4.96	□□□□□ -1.62
DHR2	YKL078W	RAT1	Q02792	1006 aa	Known RBP	4.96	□□□□□ -1.62
DHR2	YKL078W	AOS1	Q06624	347 aa		4.96	□□□□□ -1.62
DHR2	YKL078W	LAP2	Q10740	671 aa		4.96	□□□□□ -1.62
DHR2	YKL078W	GNT1	Q12096	491 aa		4.96	□□□□□ -1.62
DHR2	YKL078W	SLP1	Q12232	587 aa		4.96	□□□□□ -1.62
DHR2	YKL078W	RPL8A	P17076	256 aa	Known RBP	4.96	□□□□□ -1.62
DHR2	YKL078W	HSV2	P50079	448 aa	Predicted RBP	4.96	□□□□□ -1.62
DHR2	YKL078W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
DHR2	YKL078W	TY1A-DR2	Q03964	440 aa	Known RBP	4.96	□□□□□ -1.62
DHR2	YKL078W	GIC2	Q06648	383 aa		4.96	□□□□□ -1.62
DHR2	YKL078W	MYO2	P19524	1574 aa	Known RBP	4.95	□□□□□ -1.62
DHR2	YKL078W	RPO31	P04051	1460 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	ADR1	P07248	1323 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
DHR2	YKL078W	PEX6	P33760	1030 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	BET3	P36149	193 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	PAF1	P38351	445 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	HSE1	P38753	452 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	YPL066W	Q12194	479 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	TRK1	P12685	1235 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	CCC2	P38995	1004 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	MBP1	P39678	833 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	GDH3	P39708	457 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	VPS53	P47061	822 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	LYS5	P50113	272 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	CUZ1	P53899	274 aa		4.95	□□□□□ -1.62
DHR2	YKL078W	MRP10	O75012	95 aa		4.94	□□□□□ -1.62
DHR2	YKL078W	AFG2	P32794	780 aa		4.94	□□□□□ -1.62
DHR2	YKL078W	ALG3	P38179	458 aa		4.94	□□□□□ -1.62
DHR2	YKL078W	ZDS1	P50111	915 aa	Known RBP	4.94	□□□□□ -1.62
DHR2	YKL078W	REI1	P38344	393 aa	Predicted RBP	4.93	□□□□□ -1.62
DHR2	YKL078W	BRE2	P43132	505 aa		4.93	□□□□□ -1.62
DHR2	YKL078W	ADE12	P80210	433 aa	Known RBP	4.93	□□□□□ -1.62
DHR2	YKL078W	TY1A-MR1	Q04215	440 aa		4.93	□□□□□ -1.62
DHR2	YKL078W	PTC5	Q12511	572 aa		4.93	□□□□□ -1.62
DHR2	YKL078W	HBN1	Q96VH4	193 aa		4.93	□□□□□ -1.62
DHR2	YKL078W	HBS1	P32769	611 aa	Known RBP	4.93	□□□□□ -1.62
DHR2	YKL078W	YAR028W	P39548	234 aa		4.93	□□□□□ -1.62
DHR2	YKL078W	ROG3	P43602	733 aa		4.93	□□□□□ -1.62
DHR2	YKL078W	PMT3	P47190	753 aa		4.93	□□□□□ -1.62
DHR2	YKL078W	YPL260W	Q08977	551 aa		4.93	□□□□□ -1.62
DHR2	YKL078W	DOM34	P33309	386 aa		4.92	□□□□□ -1.62
DHR2	YKL078W	SIT1	P39980	628 aa		4.92	□□□□□ -1.62
DHR2	YKL078W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
DHR2	YKL078W	HLJ1	P48353	224 aa		4.92	□□□□□ -1.62
DHR2	YKL078W	CWC22	P53333	577 aa	Known RBP	4.92	□□□□□ -1.62
DHR2	YKL078W	SOK2	P53438	785 aa	Predicted RBP	4.92	□□□□□ -1.62
DHR2	YKL078W	TFB2	Q02939	513 aa		4.92	□□□□□ -1.62
DHR2	YKL078W	MDM12	Q92328	271 aa		4.92	□□□□□ -1.62
DHR2	YKL078W	TOM70	P07213	617 aa	Known RBP	4.92	□□□□□ -1.62
DHR2	YKL078W	GSY1	P23337	708 aa		4.92	□□□□□ -1.62
DHR2	YKL078W	MLS1	P30952	554 aa		4.92	□□□□□ -1.62
DHR2	YKL078W	CEM1	P39525	442 aa		4.92	□□□□□ -1.62
DHR2	YKL078W	SPP382	Q06411	708 aa	Predicted RBP	4.92	□□□□□ -1.62
DHR2	YKL078W	SYT1	Q06836	1226 aa		4.92	□□□□□ -1.62
DHR2	YKL078W	AVO1	Q08236	1176 aa		4.92	□□□□□ -1.62
DHR2	YKL078W	GRX7	P38068	203 aa		4.91	□□□□□ -1.62
DHR2	YKL078W	GIP2	P40036	548 aa		4.91	□□□□□ -1.62
DHR2	YKL078W	SIP5	P40210	489 aa	Known RBP	4.91	□□□□□ -1.62
DHR2	YKL078W	TPM2	P40414	161 aa		4.91	□□□□□ -1.62
DHR2	YKL078W	MAL11	P53048	616 aa		4.91	□□□□□ -1.62
DHR2	YKL078W	SAC7	P17121	654 aa		4.91	□□□□□ -1.62
DHR2	YKL078W	AAR2	P32357	355 aa	Predicted RBP	4.91	□□□□□ -1.62
DHR2	YKL078W	PAN5	P38787	379 aa		4.91	□□□□□ -1.62
DHR2	YKL078W	POL5	P39985	1022 aa	Known RBP	4.91	□□□□□ -1.62
DHR2	YKL078W	UBP6	P43593	499 aa	Known RBP	4.91	□□□□□ -1.62
DHR2	YKL078W	YNR063W	P53749	607 aa		4.91	□□□□□ -1.62
DHR2	YKL078W	SUB1	P54000	292 aa	Known RBP	4.91	□□□□□ -1.62
DHR2	YKL078W	ATG13	Q06628	738 aa		4.91	□□□□□ -1.62
DHR2	YKL078W	YDR306C	Q06640	478 aa		4.91	□□□□□ -1.62
DHR2	YKL078W	SPO74	P45819	413 aa		4.9	□□□□□ -1.63
DHR2	YKL078W	YGR237C	P50089	785 aa		4.9	□□□□□ -1.63
DHR2	YKL078W	YNL193W	P53870	558 aa		4.9	□□□□□ -1.63
DHR2	YKL078W	CHD1	P32657	1468 aa		4.9	□□□□□ -1.63
DHR2	YKL078W	KNS1	P32350	737 aa	Predicted RBP	4.89	□□□□□ -1.63
DHR2	YKL078W	PET10	P36139	283 aa		4.89	□□□□□ -1.63
DHR2	YKL078W	ENP1	P38333	483 aa	Known RBP	4.89	□□□□□ -1.63
DHR2	YKL078W	YOL057W	Q08225	711 aa		4.89	□□□□□ -1.63
DHR2	YKL078W	ADE8	P04161	214 aa		4.89	□□□□□ -1.63
DHR2	YKL078W	PNT1	P38969	423 aa		4.89	□□□□□ -1.63
DHR2	YKL078W	SRP1	Q02821	542 aa	Known RBP	4.89	□□□□□ -1.63
DHR2	YKL078W	YMR074C	Q04773	145 aa		4.89	□□□□□ -1.63
DHR2	YKL078W	ELG1	Q12050	791 aa		4.89	□□□□□ -1.63
DHR2	YKL078W	PPH3	P32345	308 aa		4.88	□□□□□ -1.63
DHR2	YKL078W	QNS1	P38795	714 aa	Known RBP	4.88	□□□□□ -1.63
DHR2	YKL078W	GIS4	Q04233	774 aa		4.88	□□□□□ -1.63
DHR2	YKL078W	LCB5	Q06147	687 aa	Known RBP	4.88	□□□□□ -1.63
DHR2	YKL078W	TOP2	P06786	1428 aa	Known RBP	4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms