RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W STM1P39015 273 aaKnown RBP4.35□□□□□ -1.71
LIF1YGL090W RSC58Q07979 502 aa4.35□□□□□ -1.71
LIF1YGL090W YPT53P36019 220 aa4.34□□□□□ -1.71
LIF1YGL090W SPO21Q12411 609 aa4.34□□□□□ -1.71
LIF1YGL090W PTC5Q12511 572 aa4.34□□□□□ -1.71
LIF1YGL090W SPS1P08458 490 aa4.33□□□□□ -1.72
LIF1YGL090W SEC23P15303 768 aaKnown RBP4.33□□□□□ -1.72
LIF1YGL090W SRO9P25567 434 aaKnown RBP4.33□□□□□ -1.72
LIF1YGL090W ALG3P38179 458 aa4.33□□□□□ -1.72
LIF1YGL090W YFL054CP43549 646 aa4.33□□□□□ -1.72
LIF1YGL090W VPS53P47061 822 aa4.33□□□□□ -1.72
LIF1YGL090W RAT1Q02792 1006 aaKnown RBP4.33□□□□□ -1.72
LIF1YGL090W RKM2Q03942 479 aa4.33□□□□□ -1.72
LIF1YGL090W FPR4Q06205 392 aaPredicted RBP4.33□□□□□ -1.72
LIF1YGL090W SPC42P36094 363 aa4.32□□□□□ -1.72
LIF1YGL090W MPT5P39016 859 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
LIF1YGL090W OSW7P43611 510 aa4.32□□□□□ -1.72
LIF1YGL090W RTS3P53289 263 aa4.32□□□□□ -1.72
LIF1YGL090W ROD1Q02805 837 aa4.32□□□□□ -1.72
LIF1YGL090W YOR352WQ08816 343 aa4.32□□□□□ -1.72
LIF1YGL090W OCA5P38738 679 aa4.31□□□□□ -1.72
LIF1YGL090W TAT2P38967 592 aa4.31□□□□□ -1.72
LIF1YGL090W GIN4Q12263 1142 aa4.31□□□□□ -1.72
LIF1YGL090W HEM3P28789 327 aa4.3□□□□□ -1.72
LIF1YGL090W NAB3P38996 802 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
LIF1YGL090W ATG36P46983 293 aa4.3□□□□□ -1.72
LIF1YGL090W ROT1Q03691 256 aa4.3□□□□□ -1.72
LIF1YGL090W NBA1Q08229 501 aaKnown RBP4.3□□□□□ -1.72
LIF1YGL090W COQ4O13525 335 aa4.29□□□□□ -1.72
LIF1YGL090W CYC1P00044 109 aaPredicted RBP4.29□□□□□ -1.72
LIF1YGL090W MCM2P29469 868 aa4.29□□□□□ -1.72
LIF1YGL090W RPS26AP39938 119 aaKnown RBP4.29□□□□□ -1.72
LIF1YGL090W RPS26BP39939 119 aaKnown RBP4.29□□□□□ -1.72
LIF1YGL090W HOS3Q02959 697 aaKnown RBP4.29□□□□□ -1.72
LIF1YGL090W RSB1Q08417 382 aa4.29□□□□□ -1.72
LIF1YGL090W PRE9P23638 258 aaKnown RBP4.28□□□□□ -1.72
LIF1YGL090W NMD2P38798 1089 aaKnown RBP4.28□□□□□ -1.72
LIF1YGL090W SPT20P50875 604 aa4.28□□□□□ -1.72
LIF1YGL090W ENV11P53246 860 aa4.28□□□□□ -1.72
LIF1YGL090W TNA1P53322 534 aa4.28□□□□□ -1.72
LIF1YGL090W SEN54Q02825 467 aaPredicted RBP4.28□□□□□ -1.72
LIF1YGL090W INO80P53115 1489 aa4.28□□□□□ -1.72
LIF1YGL090W SNF5P18480 905 aa4.27□□□□□ -1.73
LIF1YGL090W SEC20P28791 383 aa4.27□□□□□ -1.73
LIF1YGL090W TRM2P33753 639 aa4.27□□□□□ -1.73
LIF1YGL090W CCZ1P38273 704 aa4.27□□□□□ -1.73
LIF1YGL090W MRPS18P42847 217 aa4.27□□□□□ -1.73
LIF1YGL090W YGR122WP53272 402 aa4.27□□□□□ -1.73
LIF1YGL090W PLB2Q03674 706 aa4.27□□□□□ -1.73
LIF1YGL090W YDR132CQ03900 495 aa4.27□□□□□ -1.73
LIF1YGL090W PUS9Q12069 462 aa4.27□□□□□ -1.73
LIF1YGL090W RAD2P07276 1031 aa4.26□□□□□ -1.73
LIF1YGL090W MKK2P32491 506 aa4.26□□□□□ -1.73
LIF1YGL090W BAP2P38084 609 aa4.26□□□□□ -1.73
LIF1YGL090W LAM1P38851 1228 aa4.26□□□□□ -1.73
LIF1YGL090W MEF2P39677 819 aa4.26□□□□□ -1.73
LIF1YGL090W MDG1P53885 366 aa4.26□□□□□ -1.73
LIF1YGL090W SPR28Q04921 423 aa4.26□□□□□ -1.73
LIF1YGL090W SGD1Q06132 899 aa4.26□□□□□ -1.73
LIF1YGL090W MRL1Q06815 381 aa4.26□□□□□ -1.73
LIF1YGL090W YER152CP10356 443 aa4.25□□□□□ -1.73
LIF1YGL090W MLS1P30952 554 aa4.25□□□□□ -1.73
LIF1YGL090W SEC26P41810 973 aaKnown RBP4.25□□□□□ -1.73
LIF1YGL090W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
LIF1YGL090W GCR1P07261 785 aa4.24□□□□□ -1.73
LIF1YGL090W CMP2P14747 604 aa4.24□□□□□ -1.73
LIF1YGL090W CYC8P14922 966 aa4.24□□□□□ -1.73
LIF1YGL090W ATE1P16639 503 aa4.24□□□□□ -1.73
LIF1YGL090W SRM1P21827 482 aa4.24□□□□□ -1.73
LIF1YGL090W SEC8P32855 1065 aa4.24□□□□□ -1.73
LIF1YGL090W PIK1P39104 1066 aa4.24□□□□□ -1.73
LIF1YGL090W HXT13P39924 564 aa4.24□□□□□ -1.73
LIF1YGL090W HXT17P53631 564 aa4.24□□□□□ -1.73
LIF1YGL090W HXT15P54854 567 aa4.24□□□□□ -1.73
LIF1YGL090W GCN5Q03330 439 aa4.24□□□□□ -1.73
LIF1YGL090W MCD1Q12158 566 aa4.24□□□□□ -1.73
LIF1YGL090W MON2P48563 1636 aaPredicted RBP4.24□□□□□ -1.73
LIF1YGL090W GAL10P04397 699 aa4.23□□□□□ -1.73
LIF1YGL090W PUF4P25339 888 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
LIF1YGL090W KRI1P42846 591 aaKnown RBP4.23□□□□□ -1.73
LIF1YGL090W YJR008WP47085 338 aa4.23□□□□□ -1.73
LIF1YGL090W POL32P47110 350 aa4.23□□□□□ -1.73
LIF1YGL090W NNF1P47149 201 aa4.23□□□□□ -1.73
LIF1YGL090W MSE1P48525 536 aa4.23□□□□□ -1.73
LIF1YGL090W TPO2P53283 614 aa4.23□□□□□ -1.73
LIF1YGL090W SIW14P53965 281 aa4.23□□□□□ -1.73
LIF1YGL090W SVF1Q05515 481 aa4.23□□□□□ -1.73
LIF1YGL090W YPL260WQ08977 551 aa4.23□□□□□ -1.73
LIF1YGL090W SYP1P25623 870 aaKnown RBP4.22□□□□□ -1.73
LIF1YGL090W FYV10P40492 516 aa4.22□□□□□ -1.73
LIF1YGL090W GNP1P48813 663 aa4.22□□□□□ -1.73
LIF1YGL090W HNT2P49775 206 aa4.22□□□□□ -1.73
LIF1YGL090W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
LIF1YGL090W RIB2Q12362 591 aaKnown RBP4.22□□□□□ -1.73
LIF1YGL090W RFC5P38251 354 aa4.21□□□□□ -1.74
LIF1YGL090W FPR3P38911 411 aaKnown RBP4.21□□□□□ -1.74
LIF1YGL090W RPN3P40016 523 aaKnown RBP4.21□□□□□ -1.74
LIF1YGL090W DUS4Q06063 367 aa4.21□□□□□ -1.74
LIF1YGL090W MXR1P40029 184 aa4.2□□□□□ -1.74
LIF1YGL090W NOP2P40991 618 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms