RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C SPH1Q06160 661 aa8.74□□□□□ -1.01
PUP3YER094C CFT2Q12102 859 aaPredicted RBP8.74□□□□□ -1.01
PUP3YER094C SMC6Q12749 1114 aa8.74□□□□□ -1.01
PUP3YER094C PHR1P05066 565 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
PUP3YER094C HVG1P0CE11 249 aa8.73□□□□□ -1.01
PUP3YER094C TAF13P11747 167 aa8.73□□□□□ -1.01
PUP3YER094C ATE1P16639 503 aa8.73□□□□□ -1.01
PUP3YER094C UTR4P32626 227 aa8.73□□□□□ -1.01
PUP3YER094C MRPL10P36520 322 aa8.73□□□□□ -1.01
PUP3YER094C ISW1P38144 1129 aa8.73□□□□□ -1.01
PUP3YER094C CBK1P53894 756 aa8.73□□□□□ -1.01
PUP3YER094C ADY4Q05955 493 aa8.73□□□□□ -1.01
PUP3YER094C DUS3Q06053 668 aaKnown RBP8.73□□□□□ -1.01
PUP3YER094C CDC60P26637 1090 aaKnown RBP8.72□□□□□ -1.01
PUP3YER094C GSY2P27472 705 aa8.72□□□□□ -1.01
PUP3YER094C SRP40P32583 406 aaPredicted RBP8.72□□□□□ -1.01
PUP3YER094C SHP1P34223 423 aa8.72□□□□□ -1.01
PUP3YER094C MIC60P36112 540 aa8.72□□□□□ -1.01
PUP3YER094C GPB2P39717 880 aa8.72□□□□□ -1.01
PUP3YER094C FYV10P40492 516 aa8.72□□□□□ -1.01
PUP3YER094C YAF9P53930 226 aa8.72□□□□□ -1.01
PUP3YER094C SSL2Q00578 843 aa8.72□□□□□ -1.01
PUP3YER094C GUD1Q07729 489 aa8.72□□□□□ -1.01
PUP3YER094C ARP6Q12509 438 aa8.72□□□□□ -1.01
PUP3YER094C CKA2P19454 339 aa8.71□□□□□ -1.02
PUP3YER094C EUG1P32474 517 aa8.71□□□□□ -1.02
PUP3YER094C HIR1P32479 840 aa8.71□□□□□ -1.02
PUP3YER094C IXR1P33417 597 aa8.71□□□□□ -1.02
PUP3YER094C MCR1P36060 302 aaKnown RBP8.71□□□□□ -1.02
PUP3YER094C PET10P36139 283 aa8.71□□□□□ -1.02
PUP3YER094C ERG7P38604 731 aa8.71□□□□□ -1.02
PUP3YER094C HUL5P53119 910 aa8.71□□□□□ -1.02
PUP3YER094C ORC4P54791 529 aa8.71□□□□□ -1.02
PUP3YER094C CST9Q06032 482 aa8.71□□□□□ -1.02
PUP3YER094C YPR148CQ06523 435 aa8.71□□□□□ -1.02
PUP3YER094C TOM1Q03280 3268 aa8.71□□□□□ -1.02
PUP3YER094C CDC19P00549 500 aaKnown RBP8.7□□□□□ -1.02
PUP3YER094C PKC1P24583 1151 aa8.7□□□□□ -1.02
PUP3YER094C PGM1P33401 570 aaKnown RBP8.7□□□□□ -1.02
PUP3YER094C APE3P37302 537 aaKnown RBP8.7□□□□□ -1.02
PUP3YER094C RSC30P38781 883 aa8.7□□□□□ -1.02
PUP3YER094C VTC2P43585 828 aa8.7□□□□□ -1.02
PUP3YER094C ROG3P43602 733 aa8.7□□□□□ -1.02
PUP3YER094C YGR125WP53273 1036 aa8.7□□□□□ -1.02
PUP3YER094C CNM67P53865 581 aaKnown RBP8.7□□□□□ -1.02
PUP3YER094C PGA2P53903 129 aa8.7□□□□□ -1.02
PUP3YER094C TLG2Q08144 397 aa8.7□□□□□ -1.02
PUP3YER094C FOB1O13329 566 aa8.69□□□□□ -1.02
PUP3YER094C TY1B-AO13527 1196 aaKnown RBP8.69□□□□□ -1.02
PUP3YER094C CLB5P30283 435 aa8.69□□□□□ -1.02
PUP3YER094C ASH1P34233 588 aa8.69□□□□□ -1.02
PUP3YER094C THI6P41835 540 aa8.69□□□□□ -1.02
PUP3YER094C SPR3P41901 512 aa8.69□□□□□ -1.02
PUP3YER094C GFD1Q04839 188 aaKnown RBP8.69□□□□□ -1.02
PUP3YER094C SVF1Q05515 481 aa8.69□□□□□ -1.02
PUP3YER094C HCR1Q05775 265 aaKnown RBP8.69□□□□□ -1.02
PUP3YER094C WHI4Q07655 649 aaKnown RBP8.69□□□□□ -1.02
PUP3YER094C AFT2Q08957 416 aa8.69□□□□□ -1.02
PUP3YER094C TFC8Q12308 588 aa8.69□□□□□ -1.02
PUP3YER094C PGK1P00560 416 aaKnown RBP8.68□□□□□ -1.02
PUP3YER094C YEL076C-AP0CX16 216 aa8.68□□□□□ -1.02
PUP3YER094C YLR464WP0CX17 216 aa8.68□□□□□ -1.02
PUP3YER094C RAM2P29703 316 aa8.68□□□□□ -1.02
PUP3YER094C SIP3P38717 1229 aa8.68□□□□□ -1.02
PUP3YER094C ETP1P38748 585 aaKnown RBP8.68□□□□□ -1.02
PUP3YER094C YEL076CP39971 216 aa8.68□□□□□ -1.02
PUP3YER094C CTR1P49573 406 aa8.68□□□□□ -1.02
PUP3YER094C PTA1Q01329 785 aaPredicted RBP8.68□□□□□ -1.02
PUP3YER094C SUP45P12385 437 aaKnown RBP8.67□□□□□ -1.02
PUP3YER094C MIP1P15801 1254 aa8.67□□□□□ -1.02
PUP3YER094C ESS1P22696 170 aa8.67□□□□□ -1.02
PUP3YER094C ADE17P38009 592 aaKnown RBP8.67□□□□□ -1.02
PUP3YER094C PIH1P38768 344 aa8.67□□□□□ -1.02
PUP3YER094C SLD5Q03406 294 aa8.67□□□□□ -1.02
PUP3YER094C WAR1Q03631 944 aa8.67□□□□□ -1.02
PUP3YER094C PHM6Q05637 104 aa8.67□□□□□ -1.02
PUP3YER094C DUS4Q06063 367 aa8.67□□□□□ -1.02
PUP3YER094C YLR326WQ06170 240 aaKnown RBP8.67□□□□□ -1.02
PUP3YER094C CRD1Q07560 283 aa8.67□□□□□ -1.02
PUP3YER094C TY3A-GQ12173 290 aa8.67□□□□□ -1.02
PUP3YER094C ERP3Q12403 225 aa8.67□□□□□ -1.02
PUP3YER094C TY3A-IQ99219 290 aa8.67□□□□□ -1.02
PUP3YER094C ECM29P38737 1868 aa8.66□□□□□ -1.02
PUP3YER094C SRD1P09007 221 aa8.66□□□□□ -1.02
PUP3YER094C CLN3P13365 580 aa8.66□□□□□ -1.02
PUP3YER094C PFK1P16861 987 aaKnown RBP8.66□□□□□ -1.02
PUP3YER094C SUV3P32580 737 aa8.66□□□□□ -1.02
PUP3YER094C UBP11P36026 717 aa8.66□□□□□ -1.02
PUP3YER094C PPS1P38148 807 aa8.66□□□□□ -1.02
PUP3YER094C REG2P38232 338 aa8.66□□□□□ -1.02
PUP3YER094C GPD2P41911 440 aaKnown RBP8.66□□□□□ -1.02
PUP3YER094C BRE2P43132 505 aa8.66□□□□□ -1.02
PUP3YER094C ATG1P53104 897 aa8.66□□□□□ -1.02
PUP3YER094C GUP1P53154 560 aa8.66□□□□□ -1.02
PUP3YER094C YGL039WP53183 348 aaKnown RBP8.66□□□□□ -1.02
PUP3YER094C LSC2P53312 427 aa8.66□□□□□ -1.02
PUP3YER094C DIP5P53388 608 aa8.66□□□□□ -1.02
PUP3YER094C FUS2Q05670 677 aa8.66□□□□□ -1.02
PUP3YER094C SPP382Q06411 708 aaPredicted RBP8.66□□□□□ -1.02
PUP3YER094C ISA1Q07821 250 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 188 ms