RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	DYS1	P38791	387 aa		4.71	□□□□□ -1.66
TPA1	YER049W	DAK2	P43550	591 aa		4.71	□□□□□ -1.66
TPA1	YER049W	RGD2	P43556	714 aa		4.71	□□□□□ -1.66
TPA1	YER049W	VTC4	P47075	721 aa		4.71	□□□□□ -1.66
TPA1	YER049W	YJR098C	P47139	656 aa		4.71	□□□□□ -1.66
TPA1	YER049W	PSH1	Q12161	406 aa		4.71	□□□□□ -1.66
TPA1	YER049W	RDS1	P25611	832 aa		4.7	□□□□□ -1.66
TPA1	YER049W	DAL1	P32375	460 aa		4.7	□□□□□ -1.66
TPA1	YER049W	RPT1	P33299	467 aa	Known RBP	4.7	□□□□□ -1.66
TPA1	YER049W	XKS1	P42826	600 aa		4.7	□□□□□ -1.66
TPA1	YER049W	YNL011C	P53980	444 aa		4.7	□□□□□ -1.66
TPA1	YER049W	ALE1	Q08548	619 aa		4.7	□□□□□ -1.66
TPA1	YER049W	SES1	P07284	462 aa	Known RBP	4.7	□□□□□ -1.66
TPA1	YER049W	PDC6	P26263	563 aa	Known RBP	4.7	□□□□□ -1.66
TPA1	YER049W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
TPA1	YER049W	BSD2	P38356	321 aa		4.7	□□□□□ -1.66
TPA1	YER049W	YHL017W	P38745	532 aa		4.7	□□□□□ -1.66
TPA1	YER049W	RSC4	Q02206	625 aa		4.7	□□□□□ -1.66
TPA1	YER049W	MEC3	Q02574	474 aa		4.7	□□□□□ -1.66
TPA1	YER049W	SFI1	Q12369	946 aa		4.7	□□□□□ -1.66
TPA1	YER049W	SRF1	Q12516	437 aa		4.7	□□□□□ -1.66
TPA1	YER049W	MAL33	P38157	468 aa		4.69	□□□□□ -1.66
TPA1	YER049W	RFT1	P38206	574 aa	Predicted RBP	4.69	□□□□□ -1.66
TPA1	YER049W	RAD55	P38953	406 aa		4.69	□□□□□ -1.66
TPA1	YER049W	NTA1	P40354	457 aa		4.69	□□□□□ -1.66
TPA1	YER049W	NUP85	P46673	744 aa		4.69	□□□□□ -1.66
TPA1	YER049W	YPT11	P48559	417 aa		4.69	□□□□□ -1.66
TPA1	YER049W	SPR28	Q04921	423 aa		4.69	□□□□□ -1.66
TPA1	YER049W	SGD1	Q06132	899 aa		4.69	□□□□□ -1.66
TPA1	YER049W	TIF6	Q12522	245 aa	Known RBP	4.69	□□□□□ -1.66
TPA1	YER049W	PET111	P08468	800 aa		4.68	□□□□□ -1.66
TPA1	YER049W	GPA1	P08539	472 aa		4.68	□□□□□ -1.66
TPA1	YER049W	GCD6	P32501	712 aa	Known RBP	4.68	□□□□□ -1.66
TPA1	YER049W	KAP122	P32767	1081 aa		4.68	□□□□□ -1.66
TPA1	YER049W	MNR2	P35724	969 aa		4.68	□□□□□ -1.66
TPA1	YER049W	YTA6	P40328	754 aa		4.68	□□□□□ -1.66
TPA1	YER049W	SMC3	P47037	1230 aa		4.68	□□□□□ -1.66
TPA1	YER049W	MTO1	P53070	669 aa		4.68	□□□□□ -1.66
TPA1	YER049W	PIB2	P53191	635 aa		4.68	□□□□□ -1.66
TPA1	YER049W	TOS4	Q06266	489 aa		4.68	□□□□□ -1.66
TPA1	YER049W	TCB1	Q12466	1186 aa		4.68	□□□□□ -1.66
TPA1	YER049W	RSF2	P46974	1380 aa		4.68	□□□□□ -1.66
TPA1	YER049W	LEU1	P07264	779 aa	Known RBP	4.68	□□□□□ -1.66
TPA1	YER049W	MATALPHA2	P0CY08	210 aa		4.68	□□□□□ -1.66
TPA1	YER049W	HMLALPHA2	P0CY09	210 aa		4.68	□□□□□ -1.66
TPA1	YER049W	PRP45	P28004	379 aa	Predicted RBP	4.68	□□□□□ -1.66
TPA1	YER049W	OSH3	P38713	996 aa	Known RBP	4.68	□□□□□ -1.66
TPA1	YER049W	VPS60	Q03390	229 aa		4.68	□□□□□ -1.66
TPA1	YER049W	BSC2	Q05611	235 aa		4.68	□□□□□ -1.66
TPA1	YER049W	YLR407W	Q06070	228 aa		4.68	□□□□□ -1.66
TPA1	YER049W	FAS2	P19097	1887 aa	Known RBP	4.67	□□□□□ -1.66
TPA1	YER049W	OSM1	P21375	501 aa	Known RBP	4.67	□□□□□ -1.66
TPA1	YER049W	MRC1	P25588	1096 aa		4.67	□□□□□ -1.66
TPA1	YER049W	GSY2	P27472	705 aa		4.67	□□□□□ -1.66
TPA1	YER049W	MFT1	P33441	392 aa	Known RBP	4.67	□□□□□ -1.66
TPA1	YER049W	RRM3	P38766	723 aa		4.67	□□□□□ -1.66
TPA1	YER049W	RGA1	P39083	1007 aa		4.67	□□□□□ -1.66
TPA1	YER049W	YER130C	P39959	443 aa		4.67	□□□□□ -1.66
TPA1	YER049W	RAD26	P40352	1085 aa		4.67	□□□□□ -1.66
TPA1	YER049W	TFG2	P41896	400 aa	Predicted RBP	4.67	□□□□□ -1.66
TPA1	YER049W	LSC2	P53312	427 aa		4.67	□□□□□ -1.66
TPA1	YER049W	SVF1	Q05515	481 aa		4.67	□□□□□ -1.66
TPA1	YER049W	YOR296W	Q08748	1289 aa		4.67	□□□□□ -1.66
TPA1	YER049W	NOP14	Q99207	810 aa	Known RBP	4.67	□□□□□ -1.66
TPA1	YER049W	OPI1	P21957	404 aa		4.66	□□□□□ -1.66
TPA1	YER049W	SPC110	P32380	944 aa		4.66	□□□□□ -1.66
TPA1	YER049W	VPS35	P34110	944 aa		4.66	□□□□□ -1.66
TPA1	YER049W	IRS4	P36115	615 aa	Known RBP	4.66	□□□□□ -1.66
TPA1	YER049W	GIP1	P38229	639 aa		4.66	□□□□□ -1.66
TPA1	YER049W	PSY2	P40164	858 aa		4.66	□□□□□ -1.66
TPA1	YER049W	VID28	P40547	921 aa		4.66	□□□□□ -1.66
TPA1	YER049W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
TPA1	YER049W	SAM37	P50110	327 aa		4.66	□□□□□ -1.66
TPA1	YER049W	MTC5	Q03897	1148 aa		4.66	□□□□□ -1.66
TPA1	YER049W	COG4	Q06096	861 aa		4.66	□□□□□ -1.66
TPA1	YER049W	SRP40	P32583	406 aa	Predicted RBP	4.66	□□□□□ -1.66
TPA1	YER049W	ISW1	P38144	1129 aa		4.66	□□□□□ -1.66
TPA1	YER049W	RFC5	P38251	354 aa		4.66	□□□□□ -1.66
TPA1	YER049W	CIC1	P38779	376 aa	Known RBP	4.66	□□□□□ -1.66
TPA1	YER049W	FIR1	P40020	876 aa		4.66	□□□□□ -1.66
TPA1	YER049W	CTH1	P47976	325 aa		4.66	□□□□□ -1.66
TPA1	YER049W	YKE2	P52553	114 aa		4.66	□□□□□ -1.66
TPA1	YER049W	ARP5	P53946	755 aa		4.66	□□□□□ -1.66
TPA1	YER049W	CUS1	Q02554	436 aa	Predicted RBP	4.66	□□□□□ -1.66
TPA1	YER049W	WAR1	Q03631	944 aa		4.66	□□□□□ -1.66
TPA1	YER049W	SRC1	Q03707	834 aa		4.66	□□□□□ -1.66
TPA1	YER049W	NOC3	Q07896	663 aa	Predicted RBP	4.66	□□□□□ -1.66
TPA1	YER049W	RIM15	P43565	1770 aa		4.65	□□□□□ -1.66
TPA1	YER049W	SSK22	P25390	1331 aa	Predicted RBP	4.65	□□□□□ -1.66
TPA1	YER049W	PGI1	P12709	554 aa	Known RBP	4.65	□□□□□ -1.67
TPA1	YER049W	STE11	P23561	717 aa		4.65	□□□□□ -1.67
TPA1	YER049W	PEP3	P27801	918 aa		4.65	□□□□□ -1.67
TPA1	YER049W	YKT6	P36015	200 aa	Known RBP	4.65	□□□□□ -1.67
TPA1	YER049W	ENT3	P47160	408 aa		4.65	□□□□□ -1.67
TPA1	YER049W	SKP1	P52286	194 aa		4.65	□□□□□ -1.67
TPA1	YER049W	ADE16	P54113	591 aa	Known RBP	4.65	□□□□□ -1.67
TPA1	YER049W	RMT2	Q03305	412 aa		4.65	□□□□□ -1.67
TPA1	YER049W	VPS64	Q03944	604 aa		4.65	□□□□□ -1.67
TPA1	YER049W	SSP2	Q08646	371 aa		4.65	□□□□□ -1.67
TPA1	YER049W	PGA3	Q12746	312 aa	Known RBP	4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 140.6 ms