RNA–Protein interactions for RNA: YDR456W

NHX1, Transcript of Na+/H+ and K+/H+ exchanger, yeast

Gene NHX1, Length 1,902 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHX1	YDR456W	DUT1	P33317	147 aa		4.59	□□□□□ -1.67
NHX1	YDR456W	NOC2	P39744	710 aa	Known RBP	4.59	□□□□□ -1.67
NHX1	YDR456W	NDC80	P40460	691 aa		4.59	□□□□□ -1.67
NHX1	YDR456W	FAA4	P47912	694 aa	Known RBP	4.59	□□□□□ -1.67
NHX1	YDR456W	RPA14	P50106	137 aa		4.59	□□□□□ -1.67
NHX1	YDR456W	SPO1	P53541	631 aa		4.59	□□□□□ -1.67
NHX1	YDR456W	SGD1	Q06132	899 aa		4.59	□□□□□ -1.67
NHX1	YDR456W	FRA1	Q07825	749 aa		4.59	□□□□□ -1.67
NHX1	YDR456W	RUD3	Q12234	484 aa	Known RBP	4.59	□□□□□ -1.67
NHX1	YDR456W	DPS1	P04802	557 aa	Known RBP	4.58	□□□□□ -1.68
NHX1	YDR456W	MSH3	P25336	1018 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	DPB3	P27344	201 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	PEP7	P32609	515 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	PRX1	P34227	261 aa	Known RBP	4.58	□□□□□ -1.68
NHX1	YDR456W	MNR2	P35724	969 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	CAJ1	P39101	391 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	PRP31	P49704	494 aa	Predicted RBP	4.58	□□□□□ -1.68
NHX1	YDR456W	YGR021W	P53212	290 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	YGR122W	P53272	402 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	YPR097W	Q06839	1073 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	NCB2	Q92317	146 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	TSC13	Q99190	310 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	RPL8A	P17076	256 aa	Known RBP	4.58	□□□□□ -1.68
NHX1	YDR456W	KAR3	P17119	729 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	BCK2	P33306	851 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	SPF1	P39986	1215 aa	Known RBP	4.58	□□□□□ -1.68
NHX1	YDR456W	BDP1	P46678	594 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	RIA1	P53893	1110 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	RBA50	Q04418	439 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	TLG2	Q08144	397 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	GAS4	Q08271	471 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	PSH1	Q12161	406 aa		4.58	□□□□□ -1.68
NHX1	YDR456W	DDP1	Q99321	188 aa	Known RBP	4.58	□□□□□ -1.68
NHX1	YDR456W	HXK1	P04806	485 aa	Known RBP	4.57	□□□□□ -1.68
NHX1	YDR456W	GCD7	P32502	381 aa	Predicted RBP	4.57	□□□□□ -1.68
NHX1	YDR456W	PET112	P33893	541 aa		4.57	□□□□□ -1.68
NHX1	YDR456W	SIC1	P38634	284 aa		4.57	□□□□□ -1.68
NHX1	YDR456W	SPT8	P38915	602 aa		4.57	□□□□□ -1.68
NHX1	YDR456W	HXT13	P39924	564 aa		4.57	□□□□□ -1.68
NHX1	YDR456W	YGR053C	P53234	283 aa		4.57	□□□□□ -1.68
NHX1	YDR456W	YMR102C	Q03177	834 aa		4.57	□□□□□ -1.68
NHX1	YDR456W	CSI1	Q04368	295 aa		4.57	□□□□□ -1.68
NHX1	YDR456W	ENT2	Q05785	613 aa		4.57	□□□□□ -1.68
NHX1	YDR456W	SLX4	Q12098	748 aa		4.57	□□□□□ -1.68
NHX1	YDR456W	TY4A-H	Q6Q5P6	413 aa		4.57	□□□□□ -1.68
NHX1	YDR456W	PRI2	P20457	528 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	YKT6	P36015	200 aa	Known RBP	4.56	□□□□□ -1.68
NHX1	YDR456W	SOH1	P38633	127 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	HAL5	P38970	855 aa	Known RBP	4.56	□□□□□ -1.68
NHX1	YDR456W	FAA3	P39002	694 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	CCT4	P39078	528 aa	Known RBP	4.56	□□□□□ -1.68
NHX1	YDR456W	VPS8	P39702	1274 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	RSP5	P39940	809 aa	Known RBP	4.56	□□□□□ -1.68
NHX1	YDR456W	PXA1	P41909	870 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	FIG4	P42837	879 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	HXT10	P43581	546 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	SRT1	Q03175	343 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	SAS4	Q04003	481 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	ALR1	Q08269	859 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	YVC1	Q12324	675 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	ERP4	Q12450	207 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	SMC6	Q12749	1114 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	PDR18	P53756	1333 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	RRP5	Q05022	1729 aa	Known RBP	4.56	□□□□□ -1.68
NHX1	YDR456W	MPH2	P0CD99	609 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	RPB10	P22139	70 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	STE5	P32917	917 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	SQT1	P35184	431 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	AKL1	P38080	1108 aa	Known RBP	4.56	□□□□□ -1.68
NHX1	YDR456W	GDT1	P38301	280 aa	Predicted RBP	4.56	□□□□□ -1.68
NHX1	YDR456W	CTH1	P47976	325 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	TYW3	P53177	273 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	PUS5	Q06244	254 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	BMS1	Q08965	1183 aa	Known RBP	4.56	□□□□□ -1.68
NHX1	YDR456W	SNU66	Q12420	587 aa	Predicted RBP	4.56	□□□□□ -1.68
NHX1	YDR456W	TMA17	Q12513	150 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	YKL068W-A	Q3E826	78 aa		4.56	□□□□□ -1.68
NHX1	YDR456W	ADR1	P07248	1323 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	CIT1	P00890	479 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	RPL22A	P05749	121 aa	Known RBP	4.55	□□□□□ -1.68
NHX1	YDR456W	RPO26	P20435	155 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	THI4	P32318	326 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	YHL017W	P38745	532 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	VID27	P40157	782 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	RRD1	P40454	393 aa	Known RBP	4.55	□□□□□ -1.68
NHX1	YDR456W	ILM1	P47155	203 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	APT1	P49435	187 aa	Known RBP	4.55	□□□□□ -1.68
NHX1	YDR456W	PXR1	P53335	271 aa	Predicted RBP	4.55	□□□□□ -1.68
NHX1	YDR456W	FOX2	Q02207	900 aa	Known RBP	4.55	□□□□□ -1.68
NHX1	YDR456W	ATG16	Q03818	150 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	MTC5	Q03897	1148 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	SPO20	Q04359	397 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	OPI10	Q08202	246 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	FLC1	Q08967	793 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	ELG1	Q12050	791 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	YLR125W	Q12138	136 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	ATG9	Q12142	997 aa		4.55	□□□□□ -1.68
NHX1	YDR456W	MRPS28	P21771	286 aa		4.54	□□□□□ -1.68
NHX1	YDR456W	PAT1	P25644	796 aa	Known RBP	4.54	□□□□□ -1.68
NHX1	YDR456W	SAP190	P36123	1033 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms