RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	RPP1A	P05318	106 aa	Predicted RBP	6.91	□□□□□ -1.3
SNF11	YDR073W	TOP3	P13099	656 aa		6.91	□□□□□ -1.3
SNF11	YDR073W	VBA3	P25594	458 aa		6.91	□□□□□ -1.3
SNF11	YDR073W	DLD1	P32891	587 aa		6.91	□□□□□ -1.3
SNF11	YDR073W	ASH1	P34233	588 aa		6.91	□□□□□ -1.3
SNF11	YDR073W	ADD66	P36040	267 aa		6.91	□□□□□ -1.3
SNF11	YDR073W	TYS1	P36421	394 aa	Known RBP	6.91	□□□□□ -1.3
SNF11	YDR073W	YBR071W	P38243	211 aa		6.91	□□□□□ -1.3
SNF11	YDR073W	AMN1	P38285	549 aa	Predicted RBP	6.91	□□□□□ -1.3
SNF11	YDR073W	UBP6	P43593	499 aa	Known RBP	6.91	□□□□□ -1.3
SNF11	YDR073W	HNT2	P49775	206 aa		6.91	□□□□□ -1.3
SNF11	YDR073W	COG6	P53959	839 aa		6.91	□□□□□ -1.3
SNF11	YDR073W	RAT1	Q02792	1006 aa	Known RBP	6.91	□□□□□ -1.3
SNF11	YDR073W	HFD1	Q04458	532 aa		6.91	□□□□□ -1.3
SNF11	YDR073W	YDR306C	Q06640	478 aa		6.91	□□□□□ -1.3
SNF11	YDR073W	YLR001C	Q07895	862 aa		6.91	□□□□□ -1.3
SNF11	YDR073W	HVG1	P0CE11	249 aa		6.9	□□□□□ -1.3
SNF11	YDR073W	RPA135	P22138	1203 aa	Known RBP	6.9	□□□□□ -1.3
SNF11	YDR073W	RAD53	P22216	821 aa		6.9	□□□□□ -1.3
SNF11	YDR073W	AAR2	P32357	355 aa	Predicted RBP	6.9	□□□□□ -1.3
SNF11	YDR073W	EUG1	P32474	517 aa		6.9	□□□□□ -1.3
SNF11	YDR073W	YGR021W	P53212	290 aa		6.9	□□□□□ -1.3
SNF11	YDR073W	IDI1	P15496	288 aa		6.89	□□□□□ -1.31
SNF11	YDR073W	PEA2	P40091	420 aa		6.89	□□□□□ -1.31
SNF11	YDR073W	FET4	P40988	552 aa		6.89	□□□□□ -1.31
SNF11	YDR073W	SEC26	P41810	973 aa	Known RBP	6.89	□□□□□ -1.31
SNF11	YDR073W	PTK2	P47116	818 aa	Known RBP	6.89	□□□□□ -1.31
SNF11	YDR073W	YJR124C	P47159	448 aa		6.89	□□□□□ -1.31
SNF11	YDR073W	TY1A-LR4	P0C2I8	440 aa	Known RBP	6.88	□□□□□ -1.31
SNF11	YDR073W	TY1A-DR6	P0CX70	440 aa		6.88	□□□□□ -1.31
SNF11	YDR073W	TY1A-ER1	P0CX71	440 aa		6.88	□□□□□ -1.31
SNF11	YDR073W	TY1A-LR2	P0CX72	440 aa		6.88	□□□□□ -1.31
SNF11	YDR073W	TY1A-PL	P0CX73	440 aa		6.88	□□□□□ -1.31
SNF11	YDR073W	TY1A-JR1	P0CX74	440 aa		6.88	□□□□□ -1.31
SNF11	YDR073W	TY1A-LR3	P0CX75	440 aa		6.88	□□□□□ -1.31
SNF11	YDR073W	TY1A-ML2	P0CX76	440 aa		6.88	□□□□□ -1.31
SNF11	YDR073W	MSD1	P15179	658 aa	Known RBP	6.88	□□□□□ -1.31
SNF11	YDR073W	SAH1	P39954	449 aa	Known RBP	6.88	□□□□□ -1.31
SNF11	YDR073W	INP51	P40559	946 aa	Known RBP	6.88	□□□□□ -1.31
SNF11	YDR073W	UBP15	P50101	1230 aa		6.88	□□□□□ -1.31
SNF11	YDR073W	UTP5	Q04177	643 aa	Known RBP	6.88	□□□□□ -1.31
SNF11	YDR073W	TY1A-GR1	Q12085	440 aa		6.88	□□□□□ -1.31
SNF11	YDR073W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	6.88	□□□□□ -1.31
SNF11	YDR073W	TY1A-OL	Q92392	440 aa	Known RBP	6.88	□□□□□ -1.31
SNF11	YDR073W	MPD2	Q99316	277 aa		6.88	□□□□□ -1.31
SNF11	YDR073W	HTS1	P07263	546 aa	Known RBP	6.87	□□□□□ -1.31
SNF11	YDR073W	SST2	P11972	698 aa	Known RBP	6.87	□□□□□ -1.31
SNF11	YDR073W	MTC2	P34246	357 aa		6.87	□□□□□ -1.31
SNF11	YDR073W	GPP1	P41277	250 aa	Known RBP	6.87	□□□□□ -1.31
SNF11	YDR073W	ALG2	P43636	503 aa		6.87	□□□□□ -1.31
SNF11	YDR073W	NUP85	P46673	744 aa		6.87	□□□□□ -1.31
SNF11	YDR073W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.86	□□□□□ -1.31	not detected
SNF11	YDR073W	MET22	P32179	357 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	PPH3	P32345	308 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	PET10	P36139	283 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	MRPL16	P38064	232 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	NEM1	P38757	446 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	MGS1	P40151	587 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	MPH1	P40562	993 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	YJR098C	P47139	656 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	UTP22	P53254	1237 aa	Predicted RBP	6.86	□□□□□ -1.31
SNF11	YDR073W	UBX4	P54730	416 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	MTC5	Q03897	1148 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	RKM2	Q03942	479 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	COG4	Q06096	861 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	YPR071W	Q12346	211 aa		6.86	□□□□□ -1.31
SNF11	YDR073W	MLS1	P30952	554 aa		6.85	□□□□□ -1.31
SNF11	YDR073W	TFC4	P33339	1025 aa		6.85	□□□□□ -1.31
SNF11	YDR073W	TRZ1	P36159	838 aa	Predicted RBP	6.85	□□□□□ -1.31
SNF11	YDR073W	NOC2	P39744	710 aa	Known RBP	6.85	□□□□□ -1.31
SNF11	YDR073W	SLS1	P42900	643 aa		6.85	□□□□□ -1.31
SNF11	YDR073W	LSB6	P42951	607 aa		6.85	□□□□□ -1.31
SNF11	YDR073W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.85	□□□□□ -1.31	not detected
SNF11	YDR073W	TY4A-J	P47023	414 aa		6.85	□□□□□ -1.31
SNF11	YDR073W	LSC2	P53312	427 aa		6.85	□□□□□ -1.31
SNF11	YDR073W	BIO5	P53744	561 aa	Known RBP	6.85	□□□□□ -1.31
SNF11	YDR073W	YNL034W	P53963	612 aa		6.85	□□□□□ -1.31
SNF11	YDR073W	YNL018C	P53976	612 aa		6.85	□□□□□ -1.31
SNF11	YDR073W	SPO71	Q03868	1245 aa		6.85	□□□□□ -1.31
SNF11	YDR073W	MTQ2	Q03920	221 aa	Predicted RBP	6.85	□□□□□ -1.31
SNF11	YDR073W	SPP382	Q06411	708 aa	Predicted RBP	6.85	□□□□□ -1.31
SNF11	YDR073W	GNT1	Q12096	491 aa		6.85	□□□□□ -1.31
SNF11	YDR073W	SRD1	P09007	221 aa		6.84	□□□□□ -1.31
SNF11	YDR073W	RAD18	P10862	487 aa		6.84	□□□□□ -1.31
SNF11	YDR073W	PGI1	P12709	554 aa	Known RBP	6.84	□□□□□ -1.31
SNF11	YDR073W	PLC1	P32383	869 aa		6.84	□□□□□ -1.31
SNF11	YDR073W	RGD1	P38339	666 aa		6.84	□□□□□ -1.31
SNF11	YDR073W	SIP5	P40210	489 aa	Known RBP	6.84	□□□□□ -1.31
SNF11	YDR073W	YNR063W	P53749	607 aa		6.84	□□□□□ -1.31
SNF11	YDR073W	YNR065C	P53751	1116 aa		6.84	□□□□□ -1.31
SNF11	YDR073W	TGL2	P54857	326 aa		6.84	□□□□□ -1.31
SNF11	YDR073W	HEH2	Q03281	663 aa		6.84	□□□□□ -1.31
SNF11	YDR073W	DUS3	Q06053	668 aa	Known RBP	6.84	□□□□□ -1.31
SNF11	YDR073W	LCB5	Q06147	687 aa	Known RBP	6.84	□□□□□ -1.31
SNF11	YDR073W	CDC9	P04819	755 aa		6.83	□□□□□ -1.32
SNF11	YDR073W	PIF1	P07271	859 aa		6.83	□□□□□ -1.32
SNF11	YDR073W	MRS6	P32864	603 aa	Known RBP	6.83	□□□□□ -1.32
SNF11	YDR073W	YEL1	P34225	687 aa		6.83	□□□□□ -1.32
SNF11	YDR073W	TFA2	P36145	328 aa		6.83	□□□□□ -1.32
SNF11	YDR073W	ALG3	P38179	458 aa		6.83	□□□□□ -1.32

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms