RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C MGE1P38523 228 aa6.23□□□□□ -1.41
SCM3YDL139C FIR1P40020 876 aa6.23□□□□□ -1.41
SCM3YDL139C NTA1P40354 457 aa6.23□□□□□ -1.41
SCM3YDL139C YJL181WP46987 611 aa6.23□□□□□ -1.41
SCM3YDL139C CDC55Q00362 526 aa6.23□□□□□ -1.41
SCM3YDL139C OYE2Q03558 400 aaKnown RBP6.23□□□□□ -1.41
SCM3YDL139C VPS64Q03944 604 aa6.23□□□□□ -1.41
SCM3YDL139C MCA1Q08601 432 aa6.23□□□□□ -1.41
SCM3YDL139C TIF6Q12522 245 aaKnown RBP6.23□□□□□ -1.41
SCM3YDL139C LYS2P07702 1392 aa6.22□□□□□ -1.41
SCM3YDL139C MAM1P40065 302 aa6.22□□□□□ -1.41
SCM3YDL139C YER156CP40093 338 aaKnown RBP6.22□□□□□ -1.41
SCM3YDL139C DAK2P43550 591 aa6.22□□□□□ -1.41
SCM3YDL139C RSC4Q02206 625 aa6.22□□□□□ -1.41
SCM3YDL139C RPT1P33299 467 aaKnown RBP6.21□□□□□ -1.42
SCM3YDL139C NUP133P36161 1157 aa6.21□□□□□ -1.42
SCM3YDL139C TAT1P38085 619 aa6.21□□□□□ -1.42
SCM3YDL139C YNG2P38806 282 aaKnown RBP6.21□□□□□ -1.42
SCM3YDL139C PSY2P40164 858 aa6.21□□□□□ -1.42
SCM3YDL139C YIL165CP40446 119 aa6.21□□□□□ -1.42
SCM3YDL139C FYV10P40492 516 aa6.21□□□□□ -1.42
SCM3YDL139C LYS4P49367 693 aaPredicted RBP6.21□□□□□ -1.42
SCM3YDL139C ROM2P51862 1356 aaKnown RBP6.2□□□□□ -1.42
SCM3YDL139C RPS19AP07280 144 aaKnown RBP6.2□□□□□ -1.42
SCM3YDL139C RPS19BP07281 144 aaPredicted RBP6.2□□□□□ -1.42
SCM3YDL139C LPD1P09624 499 aaKnown RBP6.2□□□□□ -1.42
SCM3YDL139C MCM2P29469 868 aa6.2□□□□□ -1.42
SCM3YDL139C IRS4P36115 615 aaKnown RBP6.2□□□□□ -1.42
SCM3YDL139C PPT1P53043 513 aa6.2□□□□□ -1.42
SCM3YDL139C YRB30P53107 440 aaPredicted RBP6.2□□□□□ -1.42
SCM3YDL139C HXT17P53631 564 aa6.2□□□□□ -1.42
SCM3YDL139C UBP16Q02863 499 aa6.2□□□□□ -1.42
SCM3YDL139C GAS5Q08193 484 aa6.2□□□□□ -1.42
SCM3YDL139C GCD6P32501 712 aaKnown RBP6.19□□□□□ -1.42
SCM3YDL139C HXT13P39924 564 aa6.19□□□□□ -1.42
SCM3YDL139C CTH1P47976 325 aa6.19□□□□□ -1.42
SCM3YDL139C SAM37P50110 327 aa6.19□□□□□ -1.42
SCM3YDL139C YBP2P53169 641 aa6.19□□□□□ -1.42
SCM3YDL139C BSC2Q05611 235 aa6.19□□□□□ -1.42
SCM3YDL139C NKP2Q06162 153 aa6.19□□□□□ -1.42
SCM3YDL139C EMG1Q06287 252 aaKnown RBP6.19□□□□□ -1.42
SCM3YDL139C GCD7P32502 381 aaPredicted RBP6.18□□□□□ -1.42
SCM3YDL139C RRM3P38766 723 aa6.18□□□□□ -1.42
SCM3YDL139C PIB2P53191 635 aa6.18□□□□□ -1.42
SCM3YDL139C BUD9P53226 547 aa6.18□□□□□ -1.42
SCM3YDL139C CTF4Q01454 927 aa6.18□□□□□ -1.42
SCM3YDL139C RMD1Q03441 430 aa6.18□□□□□ -1.42
SCM3YDL139C TOS4Q06266 489 aa6.18□□□□□ -1.42
SCM3YDL139C RSC2Q06488 889 aa6.18□□□□□ -1.42
SCM3YDL139C ATG13Q06628 738 aa6.18□□□□□ -1.42
SCM3YDL139C HKR1P41809 1802 aa6.18□□□□□ -1.42
SCM3YDL139C FAS2P19097 1887 aaKnown RBP6.17□□□□□ -1.42
SCM3YDL139C SBP1P10080 294 aaKnown RBP6.17□□□□□ -1.42
SCM3YDL139C VPS35P34110 944 aa6.17□□□□□ -1.42
SCM3YDL139C AMN1P38285 549 aaPredicted RBP6.17□□□□□ -1.42
SCM3YDL139C AIM46P38885 310 aa6.17□□□□□ -1.42
SCM3YDL139C TED1P40533 473 aa6.17□□□□□ -1.42
SCM3YDL139C LSB6P42951 607 aa6.17□□□□□ -1.42
SCM3YDL139C BUD27P43573 796 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
SCM3YDL139C YGL082WP53155 381 aa6.17□□□□□ -1.42
SCM3YDL139C SOK2P53438 785 aaPredicted RBP6.17□□□□□ -1.42
SCM3YDL139C RMT2Q03305 412 aa6.17□□□□□ -1.42
SCM3YDL139C SPR28Q04921 423 aa6.17□□□□□ -1.42
SCM3YDL139C NSE3Q05541 303 aa6.17□□□□□ -1.42
SCM3YDL139C NOC3Q07896 663 aaPredicted RBP6.17□□□□□ -1.42
SCM3YDL139C SSK22P25390 1331 aaPredicted RBP6.17□□□□□ -1.42
SCM3YDL139C IME2P32581 645 aa6.16□□□□□ -1.42
SCM3YDL139C BRN1P38170 754 aa6.16□□□□□ -1.42
SCM3YDL139C YJR008WP47085 338 aa6.16□□□□□ -1.42
SCM3YDL139C RIX7Q07844 837 aaKnown RBP6.16□□□□□ -1.42
SCM3YDL139C CAF20P12962 161 aaKnown RBP6.15□□□□□ -1.42
SCM3YDL139C CIC1P38779 376 aaKnown RBP6.15□□□□□ -1.42
SCM3YDL139C GIP2P40036 548 aa6.15□□□□□ -1.42
SCM3YDL139C MEC3Q02574 474 aa6.15□□□□□ -1.42
SCM3YDL139C NYV1Q12255 253 aa6.15□□□□□ -1.42
SCM3YDL139C FIG2P25653 1609 aa6.14□□□□□ -1.43
SCM3YDL139C YHL008CP38750 627 aa6.14□□□□□ -1.43
SCM3YDL139C NMD2P38798 1089 aaKnown RBP6.14□□□□□ -1.43
SCM3YDL139C UBP12P39538 1254 aa6.14□□□□□ -1.43
SCM3YDL139C RPS26AP39938 119 aaKnown RBP6.14□□□□□ -1.43
SCM3YDL139C RPS26BP39939 119 aaKnown RBP6.14□□□□□ -1.43
SCM3YDL139C CTR9P89105 1077 aa6.14□□□□□ -1.43
SCM3YDL139C FLP1P03870 423 aa6.13□□□□□ -1.43
SCM3YDL139C INP51P40559 946 aaKnown RBP6.13□□□□□ -1.43
SCM3YDL139C DJP1P40564 432 aa6.13□□□□□ -1.43
SCM3YDL139C YFR016CP43597 1233 aaKnown RBP6.13□□□□□ -1.43
SCM3YDL139C MRPS35P53292 345 aa6.13□□□□□ -1.43
SCM3YDL139C YPL034WQ03083 165 aa6.13□□□□□ -1.43
SCM3YDL139C YMR074CQ04773 145 aa6.13□□□□□ -1.43
SCM3YDL139C RPN7Q06103 429 aaKnown RBP6.13□□□□□ -1.43
SCM3YDL139C CTI6Q08923 506 aa6.13□□□□□ -1.43
SCM3YDL139C TY4B-PA0A0B7P3V8 1104 aa6.12□□□□□ -1.43
SCM3YDL139C RFC1P38630 861 aaKnown RBP6.12□□□□□ -1.43
SCM3YDL139C FAA3P39002 694 aa6.12□□□□□ -1.43
SCM3YDL139C GSC2P40989 1895 aa6.12□□□□□ -1.43
SCM3YDL139C ALO1P54783 526 aaKnown RBP6.12□□□□□ -1.43
SCM3YDL139C SVF1Q05515 481 aa6.12□□□□□ -1.43
SCM3YDL139C OXR1Q08952 273 aa6.12□□□□□ -1.43
SCM3YDL139C TY4A-HQ6Q5P6 413 aa6.12□□□□□ -1.43
SCM3YDL139C PYC2P32327 1180 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 80.1 ms