RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	RPS3	P05750	240 aa	Known RBP	6.29	□□□□□ -1.4
SUB2	YDL084W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.29	□□□□□ -1.4	not detected
SUB2	YDL084W	RPC40	P07703	335 aa	Known RBP	6.29	□□□□□ -1.4
SUB2	YDL084W	CDC10	P25342	322 aa	Known RBP	6.29	□□□□□ -1.4
SUB2	YDL084W	RAD27	P26793	382 aa		6.29	□□□□□ -1.4
SUB2	YDL084W	RME1	P32338	300 aa	Known RBP	6.29	□□□□□ -1.4
SUB2	YDL084W	PLC1	P32383	869 aa		6.29	□□□□□ -1.4
SUB2	YDL084W	YRO2	P38079	344 aa		6.29	□□□□□ -1.4
SUB2	YDL084W	OLA1	P38219	394 aa	Known RBP	6.29	□□□□□ -1.4
SUB2	YDL084W	VTC4	P47075	721 aa		6.29	□□□□□ -1.4
SUB2	YDL084W	INP52	P50942	1183 aa		6.29	□□□□□ -1.4
SUB2	YDL084W	ARP5	P53946	755 aa		6.29	□□□□□ -1.4
SUB2	YDL084W	UBP2	Q01476	1272 aa		6.29	□□□□□ -1.4
SUB2	YDL084W	HAS1	Q03532	505 aa	Known RBP	6.29	□□□□□ -1.4
SUB2	YDL084W	GAD1	Q04792	585 aa		6.29	□□□□□ -1.4
SUB2	YDL084W	RSC3	Q06639	885 aa		6.29	□□□□□ -1.4
SUB2	YDL084W	YMR084W	A2P2R3	262 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	RGP1	P16664	663 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	PWP1	P21304	576 aa	Known RBP	6.28	□□□□□ -1.4
SUB2	YDL084W	KRE6	P32486	720 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	SSO1	P32867	290 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	PRS1	P32895	427 aa	Known RBP	6.28	□□□□□ -1.4
SUB2	YDL084W	BMH2	P34730	273 aa	Known RBP	6.28	□□□□□ -1.4
SUB2	YDL084W	TAF5	P38129	798 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	CTM1	P38818	585 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	CIN4	P39110	191 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	MTW1	P39731	289 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	ALD5	P40047	520 aa	Known RBP	6.28	□□□□□ -1.4
SUB2	YDL084W	ESL1	P40456	1118 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	PHB1	P40961	287 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	SNX4	P47057	423 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	FOL1	P53848	824 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	SAS4	Q04003	481 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	GYP1	Q08484	637 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	APC11	Q12157	165 aa		6.28	□□□□□ -1.4
SUB2	YDL084W	NOT3	P06102	836 aa	Known RBP	6.27	□□□□□ -1.41
SUB2	YDL084W	AMS1	P22855	1083 aa		6.27	□□□□□ -1.41
SUB2	YDL084W	HSP104	P31539	908 aa	Known RBP	6.27	□□□□□ -1.41
SUB2	YDL084W	RRP1	P35178	278 aa	Predicted RBP	6.27	□□□□□ -1.41
SUB2	YDL084W	RSM22	P36056	628 aa		6.27	□□□□□ -1.41
SUB2	YDL084W	ECM4	P36156	370 aa		6.27	□□□□□ -1.41
SUB2	YDL084W	YSW1	P38280	609 aa		6.27	□□□□□ -1.41
SUB2	YDL084W	TIF4631	P39935	952 aa	Known RBP	6.27	□□□□□ -1.41
SUB2	YDL084W	NDE1	P40215	560 aa		6.27	□□□□□ -1.41
SUB2	YDL084W	AGX1	P43567	385 aa		6.27	□□□□□ -1.41
SUB2	YDL084W	SAE2	P46946	345 aa		6.27	□□□□□ -1.41
SUB2	YDL084W	PEX8	P53248	589 aa		6.27	□□□□□ -1.41
SUB2	YDL084W	RRN5	Q02983	363 aa		6.27	□□□□□ -1.41
SUB2	YDL084W	SND1	Q04007	877 aa		6.27	□□□□□ -1.41
SUB2	YDL084W	ESC8	Q08119	714 aa		6.27	□□□□□ -1.41
SUB2	YDL084W	LAP2	Q10740	671 aa		6.27	□□□□□ -1.41
SUB2	YDL084W	SPA2	P23201	1466 aa	Known RBP	6.27	□□□□□ -1.41
SUB2	YDL084W	GCD1	P09032	578 aa	Predicted RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	PGI1	P12709	554 aa	Known RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	HOM2	P13663	365 aa	Known RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	TRM1	P15565	570 aa	Known RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	SSH4	P32343	579 aa		6.26	□□□□□ -1.41
SUB2	YDL084W	SFA1	P32771	386 aa		6.26	□□□□□ -1.41
SUB2	YDL084W	YKR018C	P36114	725 aa		6.26	□□□□□ -1.41
SUB2	YDL084W	YHR131C	P38835	850 aa		6.26	□□□□□ -1.41
SUB2	YDL084W	HAL5	P38970	855 aa	Known RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	SMC2	P38989	1170 aa	Known RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	YHB1	P39676	399 aa	Known RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	SAP1	P39955	897 aa	Known RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	GCD14	P46959	383 aa	Predicted RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	YGR153W	P48238	217 aa		6.26	□□□□□ -1.41
SUB2	YDL084W	LSG1	P53145	640 aa	Known RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	COG6	P53959	839 aa		6.26	□□□□□ -1.41
SUB2	YDL084W	CEG1	Q01159	459 aa	Predicted RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	MAG2	Q06436	670 aa	Known RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	CDC73	Q06697	393 aa		6.26	□□□□□ -1.41
SUB2	YDL084W	BDF2	Q07442	638 aa		6.26	□□□□□ -1.41
SUB2	YDL084W	NYV1	Q12255	253 aa		6.26	□□□□□ -1.41
SUB2	YDL084W	NOT5	Q12514	560 aa	Predicted RBP	6.26	□□□□□ -1.41
SUB2	YDL084W	YOL087C	Q99247	1116 aa		6.26	□□□□□ -1.41
SUB2	YDL084W	ATE1	P16639	503 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	RSC6	P25632	483 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	EUG1	P32474	517 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	VMA8	P32610	256 aa	Known RBP	6.25	□□□□□ -1.41
SUB2	YDL084W	RIB7	P33312	244 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	TEF4	P36008	412 aa	Known RBP	6.25	□□□□□ -1.41
SUB2	YDL084W	APD1	P38281	316 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	TCD1	P38756	429 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	BIM1	P40013	344 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	IES5	P40060	125 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	YIL166C	P40445	542 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	MNT3	P40549	630 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	CWH41	P53008	833 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	MNP1	P53163	194 aa	Predicted RBP	6.25	□□□□□ -1.41
SUB2	YDL084W	MDR1	P53258	950 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	NCS2	P53923	493 aa	Predicted RBP	6.25	□□□□□ -1.41
SUB2	YDL084W	ULP1	Q02724	621 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	ARO80	Q04052	950 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	TSR1	Q07381	788 aa	Known RBP	6.25	□□□□□ -1.41
SUB2	YDL084W	REC8	Q12188	680 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	PHM7	Q12252	991 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	YRF1-4	O13559	1382 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	YML133C	Q03099	1374 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	YLL067C	Q07888	1374 aa		6.25	□□□□□ -1.41
SUB2	YDL084W	YLL066C	Q99208	1374 aa		6.25	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms