RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 YEL076C-AP0CX16 216 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 YLR464WP0CX17 216 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 MIP1P15801 1254 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 ADP1P25371 1049 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 ORC6P38826 435 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 VPS45P38932 577 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 YEL076CP39971 216 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 CBK1P53894 756 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 ERG5P54781 538 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 VIP1Q06685 1146 aaKnown RBP11.32□□□□□ -0.6
RDN18-1RDN18-1 SPO12P17123 173 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 YKL091CP33324 310 aaKnown RBP11.32□□□□□ -0.6
RDN18-1RDN18-1 YBL028CP38202 106 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 NDT80P38830 627 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 YER156CP40093 338 aaKnown RBP11.32□□□□□ -0.6
RDN18-1RDN18-1 UME1Q03010 460 aa11.32□□□□□ -0.6
RDN18-1RDN18-1 RPL8AP17076 256 aaKnown RBP11.31□□□□□ -0.6
RDN18-1RDN18-1 EFM2P38347 419 aa11.31□□□□□ -0.6
RDN18-1RDN18-1 CAJ1P39101 391 aa11.31□□□□□ -0.6
RDN18-1RDN18-1 CSM3Q04659 317 aa11.31□□□□□ -0.6
RDN18-1RDN18-1 STE11P23561 717 aa11.3□□□□□ -0.6
RDN18-1RDN18-1 CST26P38226 397 aa11.3□□□□□ -0.6
RDN18-1RDN18-1 GAA1P39012 614 aa11.3□□□□□ -0.6
RDN18-1RDN18-1 VFA1P40080 203 aa11.3□□□□□ -0.6
RDN18-1RDN18-1 SHQ1P40486 507 aaPredicted RBP11.3□□□□□ -0.6
RDN18-1RDN18-1 BOP3P53958 396 aa11.3□□□□□ -0.6
RDN18-1RDN18-1 YLR287CQ05881 355 aa11.3□□□□□ -0.6
RDN18-1RDN18-1 LAP2Q10740 671 aa11.3□□□□□ -0.6
RDN18-1RDN18-1 TUB2P02557 457 aaKnown RBP11.3□□□□□ -0.6
RDN18-1RDN18-1 SEC23P15303 768 aaKnown RBP11.3□□□□□ -0.6
RDN18-1RDN18-1 SHC1P39000 512 aa11.3□□□□□ -0.6
RDN18-1RDN18-1 UTP4Q06679 776 aaKnown RBP11.3□□□□□ -0.6
RDN18-1RDN18-1 OXR1Q08952 273 aa11.3□□□□□ -0.6
RDN18-1RDN18-1 FKS1P38631 1876 aaKnown RBP11.29□□□□□ -0.6
RDN18-1RDN18-1 GAP1P19145 602 aaPredicted RBP11.29□□□□□ -0.6
RDN18-1RDN18-1 GSY1P23337 708 aa11.29□□□□□ -0.6
RDN18-1RDN18-1 PES4P39684 611 aa11.29□□□□□ -0.6
RDN18-1RDN18-1 VPS4P52917 437 aa11.29□□□□□ -0.6
RDN18-1RDN18-1 SPO75Q07798 868 aa11.29□□□□□ -0.6
RDN18-1RDN18-1 MTF2P10849 440 aa11.28□□□□□ -0.6
RDN18-1RDN18-1 OM45P16547 393 aa11.28□□□□□ -0.6
RDN18-1RDN18-1 CKA2P19454 339 aa11.28□□□□□ -0.6
RDN18-1RDN18-1 EFM4P40516 257 aa11.28□□□□□ -0.6
RDN18-1RDN18-1 SEN54Q02825 467 aaPredicted RBP11.28□□□□□ -0.6
RDN18-1RDN18-1 RRB1Q04225 511 aaKnown RBP11.28□□□□□ -0.6
RDN18-1RDN18-1 SMC6Q12749 1114 aa11.28□□□□□ -0.6
RDN18-1RDN18-1 PMA1P05030 918 aaKnown RBP11.28□□□□□ -0.6
RDN18-1RDN18-1 REI1P38344 393 aaPredicted RBP11.28□□□□□ -0.6
RDN18-1RDN18-1 SML1Q04964 104 aa11.28□□□□□ -0.6
RDN18-1RDN18-1 PPR1P07272 904 aaPredicted RBP11.27□□□□□ -0.61
RDN18-1RDN18-1 SUL1P38359 859 aa11.27□□□□□ -0.61
RDN18-1RDN18-1 PAN5P38787 379 aa11.27□□□□□ -0.61
RDN18-1RDN18-1 KEL1P38853 1164 aaKnown RBP11.27□□□□□ -0.61
RDN18-1RDN18-1 TRM44Q02648 567 aaKnown RBP11.27□□□□□ -0.61
RDN18-1RDN18-1 BUL2Q03758 920 aaKnown RBP11.27□□□□□ -0.61
RDN18-1RDN18-1 YLH47Q06493 454 aa11.27□□□□□ -0.61
RDN18-1RDN18-1 KRS1P15180 591 aaKnown RBP11.26□□□□□ -0.61
RDN18-1RDN18-1 RAD53P22216 821 aa11.26□□□□□ -0.61
RDN18-1RDN18-1 RAD57P25301 460 aa11.26□□□□□ -0.61
RDN18-1RDN18-1 PPS1P38148 807 aa11.26□□□□□ -0.61
RDN18-1RDN18-1 NDC80P40460 691 aa11.26□□□□□ -0.61
RDN18-1RDN18-1 GUP1P53154 560 aa11.26□□□□□ -0.61
RDN18-1RDN18-1 CRF1Q04930 467 aa11.26□□□□□ -0.61
RDN18-1RDN18-1 NEW1Q08972 1196 aaKnown RBP11.26□□□□□ -0.61
RDN18-1RDN18-1 PDC6P26263 563 aaKnown RBP11.25□□□□□ -0.61
RDN18-1RDN18-1 RAM2P29703 316 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 SPT21P35209 758 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 MCX1P38323 520 aaPredicted RBP11.25□□□□□ -0.61
RDN18-1RDN18-1 PIH1P38768 344 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 CIN4P39110 191 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 UBP5P39944 805 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 BIM1P40013 344 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 EMP47P43555 445 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 IES1P43579 692 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 TOS3P43637 560 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 LSB1P53281 241 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 RBA50Q04418 439 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 ILV1P00927 576 aaKnown RBP11.25□□□□□ -0.61
RDN18-1RDN18-1 HUL4P40985 892 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 BRE2P43132 505 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 VAC14Q06708 880 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 YDL057WQ07379 328 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 YLR001CQ07895 862 aa11.25□□□□□ -0.61
RDN18-1RDN18-1 TUP1P16649 713 aa11.24□□□□□ -0.61
RDN18-1RDN18-1 SRO9P25567 434 aaKnown RBP11.24□□□□□ -0.61
RDN18-1RDN18-1 DPB3P27344 201 aa11.24□□□□□ -0.61
RDN18-1RDN18-1 TIF4631P39935 952 aaKnown RBP11.24□□□□□ -0.61
RDN18-1RDN18-1 TAD1P53065 400 aa11.24□□□□□ -0.61
RDN18-1RDN18-1 SNU71P53207 620 aaKnown RBP11.24□□□□□ -0.61
RDN18-1RDN18-1 PGA2P53903 129 aa11.24□□□□□ -0.61
RDN18-1RDN18-1 TOM70P07213 617 aaKnown RBP11.23□□□□□ -0.61
RDN18-1RDN18-1 YAP5P40574 245 aa11.23□□□□□ -0.61
RDN18-1RDN18-1 FMS1P50264 508 aa11.23□□□□□ -0.61
RDN18-1RDN18-1 MFM1Q02783 413 aa11.23□□□□□ -0.61
RDN18-1RDN18-1 UTP5Q04177 643 aaKnown RBP11.23□□□□□ -0.61
RDN18-1RDN18-1 YKL068W-AQ3E826 78 aa11.23□□□□□ -0.61
RDN18-1RDN18-1 NOP14Q99207 810 aaKnown RBP11.23□□□□□ -0.61
RDN18-1RDN18-1 MSM1P22438 575 aa11.23□□□□□ -0.61
RDN18-1RDN18-1 TRK2P28584 889 aa11.23□□□□□ -0.61
RDN18-1RDN18-1 SEC20P28791 383 aa11.23□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms